RNA–Protein interactions for RNA: ENST00000488733.1

ATP1A1-208, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

TSL 2

Gene ATP1A1, Length 1,728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-208ENST00000488733 RRP7AQ9Y3A4 280 aaKnown RBP26.36■■□□□ 1.81
ATP1A1-208ENST00000488733 SOX12O15370 315 aa26.36■■□□□ 1.81
ATP1A1-208ENST00000488733 NEFMP07197 916 aa26.36■■□□□ 1.81
ATP1A1-208ENST00000488733 PXDNQ92626 1479 aa26.34■■□□□ 1.81
ATP1A1-208ENST00000488733 TMPOP42166 694 aaKnown RBP26.34■■□□□ 1.81
ATP1A1-208ENST00000488733 RSPH6AQ9H0K4 717 aa26.34■■□□□ 1.81
ATP1A1-208ENST00000488733 SBNO1A3KN83 1393 aa26.33■■□□□ 1.81
ATP1A1-208ENST00000488733 SPINK5Q9NQ38 1064 aaPredicted RBP26.33■■□□□ 1.81
ATP1A1-208ENST00000488733 LMOD2Q6P5Q4 547 aa26.31■■□□□ 1.8
ATP1A1-208ENST00000488733 MAP3K19Q56UN5 1328 aa26.3■■□□□ 1.8
ATP1A1-208ENST00000488733 ALS2Q96Q42 1657 aa26.3■■□□□ 1.8
ATP1A1-208ENST00000488733 PRKAR2BP31323 418 aa26.28■■□□□ 1.8
ATP1A1-208ENST00000488733 TNS3Q68CZ2 1445 aa26.28■■□□□ 1.8
ATP1A1-208ENST00000488733 KIF24Q5T7B8 1368 aa26.28■■□□□ 1.8
ATP1A1-208ENST00000488733 MYH16Q9H6N6 1097 aa26.27■■□□□ 1.8
ATP1A1-208ENST00000488733 USP19O94966 1318 aa26.27■■□□□ 1.8
ATP1A1-208ENST00000488733 KCNH5Q8NCM2 988 aa26.26■■□□□ 1.79
ATP1A1-208ENST00000488733 PEAK1Q9H792 1746 aa26.26■■□□□ 1.79
ATP1A1-208ENST00000488733 SLIT3O75094 1523 aa26.26■■□□□ 1.79
ATP1A1-208ENST00000488733 NFAT5O94916 1531 aa26.26■■□□□ 1.79
ATP1A1-208ENST00000488733 FLT4P35916 1363 aa26.26■■□□□ 1.79
ATP1A1-208ENST00000488733 RIPK4P57078 832 aa26.25■■□□□ 1.79
ATP1A1-208ENST00000488733 EIF4A2Q14240 407 aaKnown RBP26.25■■□□□ 1.79
ATP1A1-208ENST00000488733 SOS2Q07890 1332 aaPredicted RBP26.25■■□□□ 1.79
ATP1A1-208ENST00000488733 SPATA31A3Q5VYP0 1347 aa26.25■■□□□ 1.79
ATP1A1-208ENST00000488733 HMOX1P09601 288 aa26.25■■□□□ 1.79
ATP1A1-208ENST00000488733 IL16Q14005 1332 aa26.24■■□□□ 1.79
ATP1A1-208ENST00000488733 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.24■■□□□ 1.79
ATP1A1-208ENST00000488733 TRIM35Q9UPQ4 493 aa26.24■■□□□ 1.79
ATP1A1-208ENST00000488733 ARHGEF10O15013 1369 aa26.23■■□□□ 1.79
ATP1A1-208ENST00000488733 AMPHP49418 695 aa26.22■■□□□ 1.79
ATP1A1-208ENST00000488733 NHSL1Q5SYE7 1610 aa26.22■■□□□ 1.79
ATP1A1-208ENST00000488733 GCP02774 474 aa26.22■■□□□ 1.79
ATP1A1-208ENST00000488733 NFE2L2Q16236 605 aa26.22■■□□□ 1.79
ATP1A1-208ENST00000488733 HSP90AB2PQ58FF8 381 aa26.22■■□□□ 1.79
ATP1A1-208ENST00000488733 PLEKHG5O94827 1062 aa26.2■■□□□ 1.79
ATP1A1-208ENST00000488733 MED1Q15648 1581 aaPredicted RBP26.2■■□□□ 1.78
ATP1A1-208ENST00000488733 RTL1A6NKG5 1358 aa26.2■■□□□ 1.78
ATP1A1-208ENST00000488733 ROBO1Q9Y6N7 1651 aa26.19■■□□□ 1.78
ATP1A1-208ENST00000488733 PHACTR3Q96KR7 559 aa26.18■■□□□ 1.78
ATP1A1-208ENST00000488733 HOXC9P31274 260 aa26.17■■□□□ 1.78
ATP1A1-208ENST00000488733 RGPD1P0DJD0 1748 aa26.17■■□□□ 1.78
ATP1A1-208ENST00000488733 CALD1Q05682 793 aaKnown RBP26.17■■□□□ 1.78
ATP1A1-208ENST00000488733 LTN1O94822 1766 aa26.16■■□□□ 1.78
ATP1A1-208ENST00000488733 LMOD3Q0VAK6 560 aa26.16■■□□□ 1.78
ATP1A1-208ENST00000488733 CT47B1P0C2W7 299 aaPredicted RBP26.15■■□□□ 1.78
ATP1A1-208ENST00000488733 SULT6B1Q6IMI4 303 aa26.15■■□□□ 1.78
ATP1A1-208ENST00000488733 TOM1O60784 492 aa26.14■■□□□ 1.78
ATP1A1-208ENST00000488733 PLIN1O60240 522 aa26.14■■□□□ 1.77
ATP1A1-208ENST00000488733 ARHGEF25Q86VW2 580 aa26.14■■□□□ 1.77
ATP1A1-208ENST00000488733 PHRF1Q9P1Y6 1649 aaKnown RBP26.13■■□□□ 1.77
ATP1A1-208ENST00000488733 IP6K1Q92551 441 aa26.13■■□□□ 1.77
ATP1A1-208ENST00000488733 AHDC1Q5TGY3 1603 aaPredicted RBP26.13■■□□□ 1.77
ATP1A1-208ENST00000488733 B4GALNT3Q6L9W6 998 aa26.12■■□□□ 1.77
ATP1A1-208ENST00000488733 ZBTB7CA1YPR0 619 aa26.11■■□□□ 1.77
ATP1A1-208ENST00000488733 CABLES1Q8TDN4 633 aa26.11■■□□□ 1.77
ATP1A1-208ENST00000488733 EXOC6Q8TAG9 804 aa26.11■■□□□ 1.77
ATP1A1-208ENST00000488733 CCDC136Q96JN2 1154 aa26.11■■□□□ 1.77
ATP1A1-208ENST00000488733 CRYBG1Q9Y4K1 1723 aa26.1■■□□□ 1.77
ATP1A1-208ENST00000488733 FANCIQ9NVI1 1328 aa26.1■■□□□ 1.77
ATP1A1-208ENST00000488733 AEBP1Q8IUX7 1158 aa26.09■■□□□ 1.77
ATP1A1-208ENST00000488733 IGSF1Q8N6C5 1336 aa26.08■■□□□ 1.77
ATP1A1-208ENST00000488733 KDRP35968 1356 aa26.08■■□□□ 1.77
ATP1A1-208ENST00000488733 ZC3H6P61129 1189 aaKnown RBP26.08■■□□□ 1.76
ATP1A1-208ENST00000488733 BCAR3O75815 825 aa26.07■■□□□ 1.76
ATP1A1-208ENST00000488733 RARSP54136 660 aaKnown RBP26.07■■□□□ 1.76
ATP1A1-208ENST00000488733 UBAP1LF5GYI3 381 aa26.06■■□□□ 1.76
ATP1A1-208ENST00000488733 EYA1Q99502 592 aa26.06■■□□□ 1.76
ATP1A1-208ENST00000488733 PIP4K2BP78356 416 aa26.05■■□□□ 1.76
ATP1A1-208ENST00000488733 LRRC59Q96AG4 307 aaKnown RBP26.05■■□□□ 1.76
ATP1A1-208ENST00000488733 LTV1Q96GA3 475 aaPredicted RBP26.05■■□□□ 1.76
ATP1A1-208ENST00000488733 GNAI1P63096 354 aa26.04■■□□□ 1.76
ATP1A1-208ENST00000488733 TSR2Q969E8 191 aaKnown RBP26.04■■□□□ 1.76
ATP1A1-208ENST00000488733 CRBNQ96SW2 442 aa26.04■■□□□ 1.76
ATP1A1-208ENST00000488733 DLG5Q8TDM6 1919 aa26.03■■□□□ 1.76
ATP1A1-208ENST00000488733 CERKQ8TCT0 537 aa26.03■■□□□ 1.76
ATP1A1-208ENST00000488733 IFT57Q9NWB7 429 aa26.03■■□□□ 1.76
ATP1A1-208ENST00000488733 CPDO75976 1380 aa26.03■■□□□ 1.76
ATP1A1-208ENST00000488733 EXOSC9Q06265 439 aaKnown RBP26.02■■□□□ 1.76
ATP1A1-208ENST00000488733 PDE3AQ14432 1141 aa26.02■■□□□ 1.76
ATP1A1-208ENST00000488733 C20orf194Q5TEA3 1177 aa26.01■■□□□ 1.75
ATP1A1-208ENST00000488733 KIAA0232Q92628 1395 aa26.01■■□□□ 1.75
ATP1A1-208ENST00000488733 HAP1P54257 671 aaPredicted RBP26■■□□□ 1.75
ATP1A1-208ENST00000488733 AXIN2Q9Y2T1 843 aa26■■□□□ 1.75
ATP1A1-208ENST00000488733 ABCA3Q99758 1704 aa25.99■■□□□ 1.75
ATP1A1-208ENST00000488733 ABCC6O95255 1503 aa25.99■■□□□ 1.75
ATP1A1-208ENST00000488733 ZNF853P0CG23 659 aa25.99■■□□□ 1.75
ATP1A1-208ENST00000488733 PHLPP1O60346 1717 aa25.98■■□□□ 1.75
ATP1A1-208ENST00000488733 CANXP27824 592 aaKnown RBP25.98■■□□□ 1.75
ATP1A1-208ENST00000488733 ZNF428Q96B54 188 aa25.98■■□□□ 1.75
ATP1A1-208ENST00000488733 CFAP44Q96MT7 982 aa25.98■■□□□ 1.75
ATP1A1-208ENST00000488733 COL16A1Q07092 1604 aaPredicted RBP25.98■■□□□ 1.75
ATP1A1-208ENST00000488733 GAS2L2Q8NHY3 880 aa25.97■■□□□ 1.75
ATP1A1-208ENST00000488733 ANKRD24Q8TF21 1146 aa25.97■■□□□ 1.75
ATP1A1-208ENST00000488733 CHRNA2Q15822 529 aa25.96■■□□□ 1.75
ATP1A1-208ENST00000488733 LAS1LQ9Y4W2 734 aaKnown RBP25.96■■□□□ 1.75
ATP1A1-208ENST00000488733 COL18A1P39060 1754 aa25.96■■□□□ 1.75
ATP1A1-208ENST00000488733 THUMPD2Q9BTF0 503 aaKnown RBP25.95■■□□□ 1.74
ATP1A1-208ENST00000488733 PRDM11Q9NQV5 511 aa25.95■■□□□ 1.74
ATP1A1-208ENST00000488733 ERBB3P21860 1342 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms