RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 SIAH2O43255 324 aa8.85□□□□□ -0.99
ITGB1-214ENST00000488427 NR1H3Q13133 447 aa8.85□□□□□ -0.99
ITGB1-214ENST00000488427 EPS8L1Q8TE68 723 aa8.85□□□□□ -0.99
ITGB1-214ENST00000488427 GDPD2Q9HCC8 539 aa8.85□□□□□ -0.99
ITGB1-214ENST00000488427 TBC1D2BQ9UPU7 963 aa8.85□□□□□ -0.99
ITGB1-214ENST00000488427 CAPN5O15484 640 aaPredicted RBP8.84□□□□□ -0.99
ITGB1-214ENST00000488427 SOX11P35716 441 aa8.84□□□□□ -0.99
ITGB1-214ENST00000488427 EIF4G2P78344 907 aaKnown RBP eCLIP8.84□□□□□ -0.99
ITGB1-214ENST00000488427 NBPF20Q3BBV1 942 aa8.84□□□□□ -0.99
ITGB1-214ENST00000488427 MPNDQ8N594 471 aa8.84□□□□□ -0.99
ITGB1-214ENST00000488427 CARD14Q9BXL6 1004 aa8.84□□□□□ -0.99
ITGB1-214ENST00000488427 NXF1Q9UBU9 619 aaKnown RBP8.84□□□□□ -0.99
ITGB1-214ENST00000488427 SH3RF1Q7Z6J0 888 aa8.83□□□□□ -1
ITGB1-214ENST00000488427 CCDC125Q86Z20 511 aa8.83□□□□□ -1
ITGB1-214ENST00000488427 TRMT44Q8IYL2 757 aaKnown RBP8.83□□□□□ -1
ITGB1-214ENST00000488427 FOXJ1Q92949 421 aa8.83□□□□□ -1
ITGB1-214ENST00000488427 COG6Q9Y2V7 657 aa8.83□□□□□ -1
ITGB1-214ENST00000488427 BMP1P13497 986 aa8.82□□□□□ -1
ITGB1-214ENST00000488427 DZIP3Q86Y13 1208 aaKnown RBP8.82□□□□□ -1
ITGB1-214ENST00000488427 C1QTNF2Q9BXJ5 285 aa8.82□□□□□ -1
ITGB1-214ENST00000488427 MAP4K5Q9Y4K4 846 aa8.82□□□□□ -1
ITGB1-214ENST00000488427 FAM181BA6NEQ2 426 aa8.81□□□□□ -1
ITGB1-214ENST00000488427 A6NJR5 290 aa8.81□□□□□ -1
ITGB1-214ENST00000488427 TRIM46Q7Z4K8 759 aa8.81□□□□□ -1
ITGB1-214ENST00000488427 ADAM32Q8TC27 787 aa8.81□□□□□ -1
ITGB1-214ENST00000488427 ERFEQ4G0M1 354 aa8.8□□□□□ -1
ITGB1-214ENST00000488427 NPAS3Q8IXF0 933 aa8.8□□□□□ -1
ITGB1-214ENST00000488427 FBXO45P0C2W1 286 aa8.79□□□□□ -1
ITGB1-214ENST00000488427 C14orf37Q86TY3 774 aa8.79□□□□□ -1
ITGB1-214ENST00000488427 PROSER2Q86WR7 435 aaPredicted RBP8.79□□□□□ -1
ITGB1-214ENST00000488427 IRF7Q92985 503 aa8.79□□□□□ -1
ITGB1-214ENST00000488427 NR5A1Q13285 461 aa8.78□□□□□ -1
ITGB1-214ENST00000488427 ARID5BQ14865 1188 aa8.78□□□□□ -1
ITGB1-214ENST00000488427 RNF20Q5VTR2 975 aa8.78□□□□□ -1
ITGB1-214ENST00000488427 VASH1Q7L8A9 365 aaPredicted RBP8.78□□□□□ -1
ITGB1-214ENST00000488427 CDK15Q96Q40 435 aa8.78□□□□□ -1
ITGB1-214ENST00000488427 PCDHB9Q9Y5E1 797 aa8.78□□□□□ -1
ITGB1-214ENST00000488427 ADH1CP00326 375 aa8.77□□□□□ -1.01
ITGB1-214ENST00000488427 DHX9Q08211 1270 aaKnown RBP8.77□□□□□ -1.01
ITGB1-214ENST00000488427 SEMA3FQ13275 785 aa8.77□□□□□ -1.01
ITGB1-214ENST00000488427 SEPT12Q8IYM1 358 aa8.77□□□□□ -1.01
ITGB1-214ENST00000488427 GMPRP36959 345 aa8.76□□□□□ -1.01
ITGB1-214ENST00000488427 TLL2Q9Y6L7 1015 aa8.76□□□□□ -1.01
ITGB1-214ENST00000488427 C4orf48Q5BLP8 95 aa8.75□□□□□ -1.01
ITGB1-214ENST00000488427 ZFP42Q96MM3 310 aa8.75□□□□□ -1.01
ITGB1-214ENST00000488427 VEGFBP49765 207 aa8.74□□□□□ -1.01
ITGB1-214ENST00000488427 IRF5Q13568 498 aa8.74□□□□□ -1.01
ITGB1-214ENST00000488427 ZSCAN1Q8NBB4 408 aa8.74□□□□□ -1.01
ITGB1-214ENST00000488427 CLUAP1Q96AJ1 413 aa8.74□□□□□ -1.01
ITGB1-214ENST00000488427 POM121Q96HA1 1249 aa8.74□□□□□ -1.01
ITGB1-214ENST00000488427 ZMYND15Q9H091 742 aa8.74□□□□□ -1.01
ITGB1-214ENST00000488427 H3BM21 787 aa8.73□□□□□ -1.01
ITGB1-214ENST00000488427 GPR37L1O60883 481 aa8.73□□□□□ -1.01
ITGB1-214ENST00000488427 VAC14Q08AM6 782 aa8.73□□□□□ -1.01
ITGB1-214ENST00000488427 NNTQ13423 1086 aa8.73□□□□□ -1.01
ITGB1-214ENST00000488427 KCTD15Q96SI1 283 aaPredicted RBP8.73□□□□□ -1.01
ITGB1-214ENST00000488427 FSHRP23945 695 aa8.72□□□□□ -1.01
ITGB1-214ENST00000488427 SCARF1Q14162 830 aa8.72□□□□□ -1.01
ITGB1-214ENST00000488427 PGPEP1Q9NXJ5 209 aa8.72□□□□□ -1.01
ITGB1-214ENST00000488427 SLFNL1Q499Z3 407 aa8.71□□□□□ -1.02
ITGB1-214ENST00000488427 MRPL14Q6P1L8 145 aaKnown RBP8.71□□□□□ -1.02
ITGB1-214ENST00000488427 OCSTAMPQ9BR26 566 aa8.71□□□□□ -1.02
ITGB1-214ENST00000488427 ESF1Q9H501 851 aaKnown RBP8.71□□□□□ -1.02
ITGB1-214ENST00000488427 EMILIN1Q9Y6C2 1016 aa8.71□□□□□ -1.02
ITGB1-214ENST00000488427 CCDC116Q8IYX3 515 aa8.7□□□□□ -1.02
ITGB1-214ENST00000488427 WDR4P57081 412 aaKnown RBP8.69□□□□□ -1.02
ITGB1-214ENST00000488427 PURBQ96QR8 312 aaKnown RBP8.69□□□□□ -1.02
ITGB1-214ENST00000488427 TRAK2O60296 914 aa8.68□□□□□ -1.02
ITGB1-214ENST00000488427 TIMP2P16035 220 aa8.68□□□□□ -1.02
ITGB1-214ENST00000488427 FNBP4Q8N3X1 1017 aaPredicted RBP8.68□□□□□ -1.02
ITGB1-214ENST00000488427 ERBB4Q15303 1308 aa8.68□□□□□ -1.02
ITGB1-214ENST00000488427 ESPNB1AK53 854 aa8.67□□□□□ -1.02
ITGB1-214ENST00000488427 LORP23490 312 aaPredicted RBP8.67□□□□□ -1.02
ITGB1-214ENST00000488427 SIRT1Q96EB6 747 aa8.67□□□□□ -1.02
ITGB1-214ENST00000488427 GRM5P41594 1212 aa8.66□□□□□ -1.02
ITGB1-214ENST00000488427 INTS6LQ5JSJ4 861 aaKnown RBP8.66□□□□□ -1.02
ITGB1-214ENST00000488427 RNF135Q8IUD6 432 aa8.66□□□□□ -1.02
ITGB1-214ENST00000488427 CALR3Q96L12 384 aaKnown RBP8.66□□□□□ -1.02
ITGB1-214ENST00000488427 CEP126Q9P2H0 1117 aa8.66□□□□□ -1.02
ITGB1-214ENST00000488427 LZTS3O60299 673 aaPredicted RBP8.65□□□□□ -1.02
ITGB1-214ENST00000488427 MAP7D1Q3KQU3 841 aa8.65□□□□□ -1.02
ITGB1-214ENST00000488427 NFATC2IPQ8NCF5 419 aa8.65□□□□□ -1.02
ITGB1-214ENST00000488427 UPP2O95045 317 aa8.64□□□□□ -1.03
ITGB1-214ENST00000488427 MYCP01106 439 aaPredicted RBP8.64□□□□□ -1.03
ITGB1-214ENST00000488427 ALG2Q9H553 416 aa8.64□□□□□ -1.03
ITGB1-214ENST00000488427 GIGYF1O75420 1035 aaPredicted RBP8.63□□□□□ -1.03
ITGB1-214ENST00000488427 RAB15P59190 212 aa8.63□□□□□ -1.03
ITGB1-214ENST00000488427 HDGFL1Q5TGJ6 251 aa8.63□□□□□ -1.03
ITGB1-214ENST00000488427 GLMNQ92990 594 aa8.63□□□□□ -1.03
ITGB1-214ENST00000488427 KLF16Q9BXK1 252 aaPredicted RBP8.63□□□□□ -1.03
ITGB1-214ENST00000488427 DOLKQ9UPQ8 538 aa8.63□□□□□ -1.03
ITGB1-214ENST00000488427 SOBPA7XYQ1 873 aa8.62□□□□□ -1.03
ITGB1-214ENST00000488427 ZIC2O95409 532 aaPredicted RBP8.62□□□□□ -1.03
ITGB1-214ENST00000488427 PPP1R26Q5T8A7 1209 aaPredicted RBP8.62□□□□□ -1.03
ITGB1-214ENST00000488427 MAN1A2O60476 641 aa8.61□□□□□ -1.03
ITGB1-214ENST00000488427 VSIG8P0DPA2 414 aa8.61□□□□□ -1.03
ITGB1-214ENST00000488427 USP4Q13107 963 aa8.61□□□□□ -1.03
ITGB1-214ENST00000488427 PCDHB11Q9Y5F2 797 aa8.61□□□□□ -1.03
ITGB1-214ENST00000488427 POM121CA8CG34 1229 aa8.6□□□□□ -1.03
ITGB1-214ENST00000488427 ERVH48-1M5A8F1 160 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms