RNA–Protein interactions for RNA: ENST00000488193.5

TFAP2A-215, Transcript of transcription factor AP-2 alpha, humanhuman

TSL 1 (best)

Gene TFAP2A, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-215ENST00000488193 NFAT5O94916 1531 aa18.97■□□□□ 0.63
TFAP2A-215ENST00000488193 FLT4P35916 1363 aa18.95■□□□□ 0.62
TFAP2A-215ENST00000488193 PNNQ9H307 717 aaKnown RBP18.95■□□□□ 0.62
TFAP2A-215ENST00000488193 MAPK8IP3Q9UPT6 1336 aa18.95■□□□□ 0.62
TFAP2A-215ENST00000488193 RRP1P56182 461 aaKnown RBP18.94■□□□□ 0.62
TFAP2A-215ENST00000488193 KRT28Q7Z3Y7 464 aa18.94■□□□□ 0.62
TFAP2A-215ENST00000488193 CADPS2Q86UW7 1296 aa18.94■□□□□ 0.62
TFAP2A-215ENST00000488193 MSH6P52701 1360 aa18.94■□□□□ 0.62
TFAP2A-215ENST00000488193 ERICH6BQ5W0A0 696 aa18.94■□□□□ 0.62
TFAP2A-215ENST00000488193 AEBP1Q8IUX7 1158 aa18.94■□□□□ 0.62
TFAP2A-215ENST00000488193 KIF24Q5T7B8 1368 aa18.94■□□□□ 0.62
TFAP2A-215ENST00000488193 LTN1O94822 1766 aa18.93■□□□□ 0.62
TFAP2A-215ENST00000488193 ALS2Q96Q42 1657 aa18.93■□□□□ 0.62
TFAP2A-215ENST00000488193 SLIT3O75094 1523 aa18.93■□□□□ 0.62
TFAP2A-215ENST00000488193 RIPK4P57078 832 aa18.92■□□□□ 0.62
TFAP2A-215ENST00000488193 DDX17Q92841 729 aaKnown RBP18.92■□□□□ 0.62
TFAP2A-215ENST00000488193 HOXC9P31274 260 aa18.92■□□□□ 0.62
TFAP2A-215ENST00000488193 AMPHP49418 695 aa18.91■□□□□ 0.62
TFAP2A-215ENST00000488193 NFE2L2Q16236 605 aa18.9■□□□□ 0.62
TFAP2A-215ENST00000488193 SULT6B1Q6IMI4 303 aa18.9■□□□□ 0.62
TFAP2A-215ENST00000488193 USP19O94966 1318 aa18.9■□□□□ 0.62
TFAP2A-215ENST00000488193 DLG5Q8TDM6 1919 aa18.9■□□□□ 0.62
TFAP2A-215ENST00000488193 PHRF1Q9P1Y6 1649 aaKnown RBP18.89■□□□□ 0.61
TFAP2A-215ENST00000488193 ARHGEF10O15013 1369 aa18.89■□□□□ 0.61
TFAP2A-215ENST00000488193 IGSF1Q8N6C5 1336 aa18.88■□□□□ 0.61
TFAP2A-215ENST00000488193 EYA1Q99502 592 aa18.88■□□□□ 0.61
TFAP2A-215ENST00000488193 PXDNQ92626 1479 aa18.87■□□□□ 0.61
TFAP2A-215ENST00000488193 RTL1A6NKG5 1358 aa18.87■□□□□ 0.61
TFAP2A-215ENST00000488193 KDRP35968 1356 aa18.87■□□□□ 0.61
TFAP2A-215ENST00000488193 MED1Q15648 1581 aaPredicted RBP18.87■□□□□ 0.61
TFAP2A-215ENST00000488193 IL16Q14005 1332 aa18.86■□□□□ 0.61
TFAP2A-215ENST00000488193 PLIN1O60240 522 aa18.86■□□□□ 0.61
TFAP2A-215ENST00000488193 GCP02774 474 aa18.86■□□□□ 0.61
TFAP2A-215ENST00000488193 KCNH5Q8NCM2 988 aa18.86■□□□□ 0.61
TFAP2A-215ENST00000488193 BRINP3Q76B58 766 aa18.86■□□□□ 0.61
TFAP2A-215ENST00000488193 IP6K1Q92551 441 aa18.86■□□□□ 0.61
TFAP2A-215ENST00000488193 ARHGEF25Q86VW2 580 aa18.84■□□□□ 0.61
TFAP2A-215ENST00000488193 PPP4R2Q9NY27 417 aa18.84■□□□□ 0.61
TFAP2A-215ENST00000488193 NPHP3Q7Z494 1330 aa18.84■□□□□ 0.61
TFAP2A-215ENST00000488193 FANCIQ9NVI1 1328 aa18.83■□□□□ 0.61
TFAP2A-215ENST00000488193 NEFMP07197 916 aa18.83■□□□□ 0.6
TFAP2A-215ENST00000488193 LMOD2Q6P5Q4 547 aa18.83■□□□□ 0.6
TFAP2A-215ENST00000488193 TSR2Q969E8 191 aaKnown RBP18.83■□□□□ 0.6
TFAP2A-215ENST00000488193 MYH16Q9H6N6 1097 aa18.83■□□□□ 0.6
TFAP2A-215ENST00000488193 SLAIN2Q9P270 581 aa18.83■□□□□ 0.6
TFAP2A-215ENST00000488193 THUMPD2Q9BTF0 503 aaKnown RBP18.82■□□□□ 0.6
TFAP2A-215ENST00000488193 BCAR3O75815 825 aa18.82■□□□□ 0.6
TFAP2A-215ENST00000488193 CRYBG1Q9Y4K1 1723 aa18.81■□□□□ 0.6
TFAP2A-215ENST00000488193 C20orf194Q5TEA3 1177 aa18.81■□□□□ 0.6
TFAP2A-215ENST00000488193 TNS3Q68CZ2 1445 aa18.81■□□□□ 0.6
TFAP2A-215ENST00000488193 PLEKHG5O94827 1062 aa18.8■□□□□ 0.6
TFAP2A-215ENST00000488193 RGPD2P0DJD1 1756 aa18.8■□□□□ 0.6
TFAP2A-215ENST00000488193 SPATA31A3Q5VYP0 1347 aa18.8■□□□□ 0.6
TFAP2A-215ENST00000488193 FAM83GA6ND36 823 aa18.8■□□□□ 0.6
TFAP2A-215ENST00000488193 EXOC6Q8TAG9 804 aa18.8■□□□□ 0.6
TFAP2A-215ENST00000488193 LTV1Q96GA3 475 aaPredicted RBP18.8■□□□□ 0.6
TFAP2A-215ENST00000488193 ZNF853P0CG23 659 aa18.78■□□□□ 0.6
TFAP2A-215ENST00000488193 RARSP54136 660 aaKnown RBP18.78■□□□□ 0.6
TFAP2A-215ENST00000488193 AXIN2Q9Y2T1 843 aa18.77■□□□□ 0.6
TFAP2A-215ENST00000488193 SOS2Q07890 1332 aaPredicted RBP18.77■□□□□ 0.6
TFAP2A-215ENST00000488193 RGPD5Q99666 1765 aa18.77■□□□□ 0.6
TFAP2A-215ENST00000488193 EXOSC9Q06265 439 aaKnown RBP18.77■□□□□ 0.6
TFAP2A-215ENST00000488193 DCTN1Q14203 1278 aa18.77■□□□□ 0.6
TFAP2A-215ENST00000488193 MTHFSDQ2M296 383 aaKnown RBP18.77■□□□□ 0.6
TFAP2A-215ENST00000488193 NBPF6Q5VWK0 638 aa18.77■□□□□ 0.6
TFAP2A-215ENST00000488193 B4GALNT3Q6L9W6 998 aa18.77■□□□□ 0.6
TFAP2A-215ENST00000488193 NBPF4Q96M43 638 aa18.77■□□□□ 0.6
TFAP2A-215ENST00000488193 COL18A1P39060 1754 aa18.76■□□□□ 0.59
TFAP2A-215ENST00000488193 LTBP4Q8N2S1 1624 aa18.76■□□□□ 0.59
TFAP2A-215ENST00000488193 ZBTB7CA1YPR0 619 aa18.75■□□□□ 0.59
TFAP2A-215ENST00000488193 CABLES1Q8TDN4 633 aa18.75■□□□□ 0.59
TFAP2A-215ENST00000488193 LMOD3Q0VAK6 560 aa18.75■□□□□ 0.59
TFAP2A-215ENST00000488193 USHBP1Q8N6Y0 703 aa18.75■□□□□ 0.59
TFAP2A-215ENST00000488193 CRBNQ96SW2 442 aa18.75■□□□□ 0.59
TFAP2A-215ENST00000488193 NCAPD2Q15021 1401 aa18.75■□□□□ 0.59
TFAP2A-215ENST00000488193 ZC3H6P61129 1189 aaKnown RBP18.74■□□□□ 0.59
TFAP2A-215ENST00000488193 IFT57Q9NWB7 429 aa18.74■□□□□ 0.59
TFAP2A-215ENST00000488193 LRRC59Q96AG4 307 aaKnown RBP18.73■□□□□ 0.59
TFAP2A-215ENST00000488193 NHSL1Q5SYE7 1610 aa18.73■□□□□ 0.59
TFAP2A-215ENST00000488193 CT47B1P0C2W7 299 aaPredicted RBP18.73■□□□□ 0.59
TFAP2A-215ENST00000488193 CAMTA1Q9Y6Y1 1673 aa18.73■□□□□ 0.59
TFAP2A-215ENST00000488193 CALD1Q05682 793 aaKnown RBP18.72■□□□□ 0.59
TFAP2A-215ENST00000488193 MCM10Q7L590 875 aa18.71■□□□□ 0.59
TFAP2A-215ENST00000488193 ANKRD24Q8TF21 1146 aa18.71■□□□□ 0.59
TFAP2A-215ENST00000488193 CFAP44Q96MT7 982 aa18.71■□□□□ 0.59
TFAP2A-215ENST00000488193 MBIPQ9NS73 344 aa18.71■□□□□ 0.59
TFAP2A-215ENST00000488193 CRB1P82279 1406 aa18.71■□□□□ 0.59
TFAP2A-215ENST00000488193 GNAI1P63096 354 aa18.71■□□□□ 0.59
TFAP2A-215ENST00000488193 LAS1LQ9Y4W2 734 aaKnown RBP18.71■□□□□ 0.59
TFAP2A-215ENST00000488193 LMO7Q8WWI1 1683 aa18.7■□□□□ 0.58
TFAP2A-215ENST00000488193 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.7■□□□□ 0.58
TFAP2A-215ENST00000488193 BCL2L13Q9BXK5 485 aa18.69■□□□□ 0.58
TFAP2A-215ENST00000488193 GAS2L2Q8NHY3 880 aa18.69■□□□□ 0.58
TFAP2A-215ENST00000488193 SSH1Q8WYL5 1049 aa18.68■□□□□ 0.58
TFAP2A-215ENST00000488193 CPDO75976 1380 aa18.68■□□□□ 0.58
TFAP2A-215ENST00000488193 ERBB3P21860 1342 aa18.67■□□□□ 0.58
TFAP2A-215ENST00000488193 LRRC37A3O60309 1634 aa18.67■□□□□ 0.58
TFAP2A-215ENST00000488193 CHL1O00533 1208 aa18.67■□□□□ 0.58
TFAP2A-215ENST00000488193 TSPYL6Q8N831 410 aa18.67■□□□□ 0.58
TFAP2A-215ENST00000488193 TNNQ9UQP3 1299 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms