RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 CD163L1Q9NR16 1453 aa15.96■□□□□ 0.14
NIPAL3-207ENST00000488155 CRB1P82279 1406 aa15.95■□□□□ 0.14
NIPAL3-207ENST00000488155 HDGFL2Q7Z4V5 671 aaPredicted RBP15.95■□□□□ 0.14
NIPAL3-207ENST00000488155 ARHGEF25Q86VW2 580 aa15.95■□□□□ 0.14
NIPAL3-207ENST00000488155 PSDA5PKW4 1024 aaPredicted RBP15.94■□□□□ 0.14
NIPAL3-207ENST00000488155 CSB-PGBD3P0DP91 1061 aa15.94■□□□□ 0.14
NIPAL3-207ENST00000488155 THRAP3Q9Y2W1 955 aaKnown RBP15.94■□□□□ 0.14
NIPAL3-207ENST00000488155 NFAT5O94916 1531 aa15.94■□□□□ 0.14
NIPAL3-207ENST00000488155 EZH2Q15910 746 aaKnown RBP15.93■□□□□ 0.14
NIPAL3-207ENST00000488155 TESK2Q96S53 571 aa15.93■□□□□ 0.14
NIPAL3-207ENST00000488155 SRCAPQ6ZRS2 3230 aa15.92■□□□□ 0.14
NIPAL3-207ENST00000488155 APBA3O96018 575 aa15.92■□□□□ 0.14
NIPAL3-207ENST00000488155 USP54Q70EL1 1684 aa15.92■□□□□ 0.14
NIPAL3-207ENST00000488155 WDR17Q8IZU2 1322 aa15.92■□□□□ 0.14
NIPAL3-207ENST00000488155 A0A1W2PP64 1363 aa15.91■□□□□ 0.14
NIPAL3-207ENST00000488155 LRRC37A3O60309 1634 aa15.91■□□□□ 0.14
NIPAL3-207ENST00000488155 TERF2IPQ9NYB0 399 aa15.91■□□□□ 0.14
NIPAL3-207ENST00000488155 USP31Q70CQ4 1352 aa15.89■□□□□ 0.13
NIPAL3-207ENST00000488155 EDC4Q6P2E9 1401 aaKnown RBP15.89■□□□□ 0.13
NIPAL3-207ENST00000488155 DDB1Q16531 1140 aa15.89■□□□□ 0.13
NIPAL3-207ENST00000488155 USP47Q96K76 1375 aa15.88■□□□□ 0.13
NIPAL3-207ENST00000488155 PEAK1Q9H792 1746 aa15.88■□□□□ 0.13
NIPAL3-207ENST00000488155 RGPD2P0DJD1 1756 aa15.87■□□□□ 0.13
NIPAL3-207ENST00000488155 R3HDM1Q15032 1099 aaKnown RBP15.87■□□□□ 0.13
NIPAL3-207ENST00000488155 PUS7Q96PZ0 661 aaKnown RBP15.87■□□□□ 0.13
NIPAL3-207ENST00000488155 CAMKK2Q96RR4 588 aa15.87■□□□□ 0.13
NIPAL3-207ENST00000488155 DISP2A7MBM2 1401 aa15.86■□□□□ 0.13
NIPAL3-207ENST00000488155 NUP188Q5SRE5 1749 aa15.86■□□□□ 0.13
NIPAL3-207ENST00000488155 CARD10Q9BWT7 1032 aa15.86■□□□□ 0.13
NIPAL3-207ENST00000488155 RREB1Q92766 1687 aa15.86■□□□□ 0.13
NIPAL3-207ENST00000488155 TMF1P82094 1093 aa15.85■□□□□ 0.13
NIPAL3-207ENST00000488155 NLRP2Q9NX02 1062 aa15.85■□□□□ 0.13
NIPAL3-207ENST00000488155 OVOS2A0A0G2JMS6 1433 aa15.85■□□□□ 0.13
NIPAL3-207ENST00000488155 OVOS2A0A0J9YW53 1432 aa15.85■□□□□ 0.13
NIPAL3-207ENST00000488155 OVOS2Q6IE36 1432 aa15.85■□□□□ 0.13
NIPAL3-207ENST00000488155 FBLN1P23142 703 aa15.84■□□□□ 0.13
NIPAL3-207ENST00000488155 MARCH10Q8NA82 808 aaPredicted RBP15.84■□□□□ 0.13
NIPAL3-207ENST00000488155 PTF1AQ7RTS3 328 aa15.83■□□□□ 0.12
NIPAL3-207ENST00000488155 LTV1Q96GA3 475 aaPredicted RBP15.83■□□□□ 0.12
NIPAL3-207ENST00000488155 ABCC6O95255 1503 aa15.83■□□□□ 0.12
NIPAL3-207ENST00000488155 KIF20BQ96Q89 1820 aa15.82■□□□□ 0.12
NIPAL3-207ENST00000488155 EXOC5O00471 708 aa15.82■□□□□ 0.12
NIPAL3-207ENST00000488155 SLC24A1O60721 1099 aa15.82■□□□□ 0.12
NIPAL3-207ENST00000488155 ANKRD24Q8TF21 1146 aa15.82■□□□□ 0.12
NIPAL3-207ENST00000488155 COG3Q96JB2 828 aa15.82■□□□□ 0.12
NIPAL3-207ENST00000488155 CDCA7Q9BWT1 371 aaPredicted RBP15.82■□□□□ 0.12
NIPAL3-207ENST00000488155 ERBB3P21860 1342 aa15.82■□□□□ 0.12
NIPAL3-207ENST00000488155 NINLQ9Y2I6 1382 aa15.82■□□□□ 0.12
NIPAL3-207ENST00000488155 CCDC7Q96M83 1385 aa15.81■□□□□ 0.12
NIPAL3-207ENST00000488155 LRP5O75197 1615 aa15.8■□□□□ 0.12
NIPAL3-207ENST00000488155 ANKRD36BQ8N2N9 1353 aa15.8■□□□□ 0.12
NIPAL3-207ENST00000488155 GGNBP2Q9H3C7 697 aa15.79■□□□□ 0.12
NIPAL3-207ENST00000488155 MYOM1P52179 1685 aa15.79■□□□□ 0.12
NIPAL3-207ENST00000488155 PARD3Q8TEW0 1356 aa15.78■□□□□ 0.12
NIPAL3-207ENST00000488155 C11orf95C9JLR9 678 aaPredicted RBP15.78■□□□□ 0.12
NIPAL3-207ENST00000488155 AMPHP49418 695 aa15.78■□□□□ 0.12
NIPAL3-207ENST00000488155 CCER1Q8TC90 406 aaPredicted RBP15.78■□□□□ 0.12
NIPAL3-207ENST00000488155 IP6K1Q92551 441 aa15.78■□□□□ 0.12
NIPAL3-207ENST00000488155 POLR3GLQ9BT43 218 aa15.78■□□□□ 0.12
NIPAL3-207ENST00000488155 FAM208AQ9UK61 1670 aaKnown RBP15.77■□□□□ 0.12
NIPAL3-207ENST00000488155 MAP3K19Q56UN5 1328 aa15.77■□□□□ 0.12
NIPAL3-207ENST00000488155 IL2RBP14784 551 aa15.77■□□□□ 0.12
NIPAL3-207ENST00000488155 NBPF14Q5TI25 921 aa15.77■□□□□ 0.12
NIPAL3-207ENST00000488155 ACSBG1Q96GR2 724 aa15.77■□□□□ 0.12
NIPAL3-207ENST00000488155 MAP2P11137 1827 aaKnown RBP15.77■□□□□ 0.11
NIPAL3-207ENST00000488155 RGPD3A6NKT7 1758 aaPredicted RBP15.77■□□□□ 0.11
NIPAL3-207ENST00000488155 RGPD4Q7Z3J3 1758 aa15.77■□□□□ 0.11
NIPAL3-207ENST00000488155 CLSPNQ9HAW4 1339 aa15.76■□□□□ 0.11
NIPAL3-207ENST00000488155 FYB1O15117 783 aa15.76■□□□□ 0.11
NIPAL3-207ENST00000488155 RRS1Q15050 365 aaKnown RBP15.76■□□□□ 0.11
NIPAL3-207ENST00000488155 CDCA8Q53HL2 280 aa15.76■□□□□ 0.11
NIPAL3-207ENST00000488155 BCL11BQ9C0K0 894 aaPredicted RBP15.76■□□□□ 0.11
NIPAL3-207ENST00000488155 TIMELESSQ9UNS1 1208 aa15.76■□□□□ 0.11
NIPAL3-207ENST00000488155 TNS2Q63HR2 1409 aa15.76■□□□□ 0.11
NIPAL3-207ENST00000488155 KCNQ2O43526 872 aa15.75■□□□□ 0.11
NIPAL3-207ENST00000488155 HOXC9P31274 260 aa15.75■□□□□ 0.11
NIPAL3-207ENST00000488155 BTAF1O14981 1849 aa15.75■□□□□ 0.11
NIPAL3-207ENST00000488155 NHSQ6T4R5 1651 aa15.73■□□□□ 0.11
NIPAL3-207ENST00000488155 PLSCR1O15162 318 aa15.73■□□□□ 0.11
NIPAL3-207ENST00000488155 DDX54Q8TDD1 881 aaKnown RBP15.72■□□□□ 0.11
NIPAL3-207ENST00000488155 CARD14Q9BXL6 1004 aa15.72■□□□□ 0.11
NIPAL3-207ENST00000488155 BCL9O00512 1426 aa15.71■□□□□ 0.11
NIPAL3-207ENST00000488155 NSD3Q9BZ95 1437 aa15.71■□□□□ 0.11
NIPAL3-207ENST00000488155 PROM2Q8N271 834 aa15.71■□□□□ 0.11
NIPAL3-207ENST00000488155 SHANK3Q9BYB0 1731 aa15.71■□□□□ 0.1
NIPAL3-207ENST00000488155 USHBP1Q8N6Y0 703 aa15.7■□□□□ 0.1
NIPAL3-207ENST00000488155 ANO8Q9HCE9 1232 aaPredicted RBP15.7■□□□□ 0.1
NIPAL3-207ENST00000488155 TXNRD1Q16881 649 aa15.69■□□□□ 0.1
NIPAL3-207ENST00000488155 DOT1LQ8TEK3 1739 aa15.68■□□□□ 0.1
NIPAL3-207ENST00000488155 HSPA5P11021 654 aaKnown RBP15.68■□□□□ 0.1
NIPAL3-207ENST00000488155 HSP90AB2PQ58FF8 381 aa15.67■□□□□ 0.1
NIPAL3-207ENST00000488155 NBPF6Q5VWK0 638 aa15.67■□□□□ 0.1
NIPAL3-207ENST00000488155 NBPF4Q96M43 638 aa15.67■□□□□ 0.1
NIPAL3-207ENST00000488155 PDGFDQ9GZP0 370 aaPredicted RBP15.67■□□□□ 0.1
NIPAL3-207ENST00000488155 RTL1A6NKG5 1358 aa15.66■□□□□ 0.1
NIPAL3-207ENST00000488155 PPM1GO15355 546 aaPredicted RBP15.66■□□□□ 0.1
NIPAL3-207ENST00000488155 EIF4G2P78344 907 aaKnown RBP eCLIP15.66■□□□□ 0.1
NIPAL3-207ENST00000488155 EMILIN1Q9Y6C2 1016 aa15.66■□□□□ 0.1
NIPAL3-207ENST00000488155 MEGF6O75095 1541 aa15.66■□□□□ 0.1
NIPAL3-207ENST00000488155 CASZ1Q86V15 1759 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms