RNA–Protein interactions for RNA: ENST00000488089.1

LAMA1-204, Transcript of laminin subunit alpha 1, humanhuman

TSL 2

Gene LAMA1, Length 4,577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1-204ENST00000488089 CCP110O43303 1012 aa11.26□□□□□ -0.61
LAMA1-204ENST00000488089 SURF6O75683 361 aaKnown RBP11.26□□□□□ -0.61
LAMA1-204ENST00000488089 LETM1O95202 739 aaPredicted RBP11.26□□□□□ -0.61
LAMA1-204ENST00000488089 ZNF396Q96N95 335 aaPredicted RBP11.26□□□□□ -0.61
LAMA1-204ENST00000488089 BACH2Q9BYV9 841 aa11.26□□□□□ -0.61
LAMA1-204ENST00000488089 FOXD4L5Q5VV16 416 aaPredicted RBP11.25□□□□□ -0.61
LAMA1-204ENST00000488089 FOXD4L4Q8WXT5 416 aaPredicted RBP11.25□□□□□ -0.61
LAMA1-204ENST00000488089 MAGI1Q96QZ7 1491 aaPredicted RBP11.25□□□□□ -0.61
LAMA1-204ENST00000488089 CDC45O75419 566 aa11.25□□□□□ -0.61
LAMA1-204ENST00000488089 MPHOSPH10O00566 681 aaKnown RBP11.25□□□□□ -0.61
LAMA1-204ENST00000488089 ANKRD1Q15327 319 aa11.25□□□□□ -0.61
LAMA1-204ENST00000488089 AFAP1Q8N556 730 aa11.25□□□□□ -0.61
LAMA1-204ENST00000488089 CTNNA3Q9UI47 895 aa11.25□□□□□ -0.61
LAMA1-204ENST00000488089 PLB1Q6P1J6 1458 aa11.25□□□□□ -0.61
LAMA1-204ENST00000488089 CCDC141Q6ZP82 1450 aa11.25□□□□□ -0.61
LAMA1-204ENST00000488089 ERLIN2O94905 339 aa11.25□□□□□ -0.61
LAMA1-204ENST00000488089 CT47B1P0C2W7 299 aaPredicted RBP11.25□□□□□ -0.61
LAMA1-204ENST00000488089 MNS1Q8NEH6 495 aa11.25□□□□□ -0.61
LAMA1-204ENST00000488089 ZNHIT6Q9NWK9 470 aaKnown RBP11.25□□□□□ -0.61
LAMA1-204ENST00000488089 RPGRIP1LQ68CZ1 1315 aa11.24□□□□□ -0.61
LAMA1-204ENST00000488089 GRIN2AQ12879 1464 aa11.24□□□□□ -0.61
LAMA1-204ENST00000488089 TCOF1Q13428 1488 aaKnown RBP11.24□□□□□ -0.61
LAMA1-204ENST00000488089 KCNH5Q8NCM2 988 aa11.24□□□□□ -0.61
LAMA1-204ENST00000488089 AMER1Q5JTC6 1135 aaPredicted RBP11.24□□□□□ -0.61
LAMA1-204ENST00000488089 KINO60870 393 aaKnown RBP11.24□□□□□ -0.61
LAMA1-204ENST00000488089 CCDC57Q2TAC2 916 aa11.24□□□□□ -0.61
LAMA1-204ENST00000488089 NOL7Q9UMY1 257 aaKnown RBP11.24□□□□□ -0.61
LAMA1-204ENST00000488089 STARD3NLO95772 234 aa11.23□□□□□ -0.61
LAMA1-204ENST00000488089 ZNF428Q96B54 188 aa11.23□□□□□ -0.61
LAMA1-204ENST00000488089 DACH1Q9UI36 760 aa11.23□□□□□ -0.61
LAMA1-204ENST00000488089 ARHGEF11O15085 1522 aa11.23□□□□□ -0.61
LAMA1-204ENST00000488089 CCT4P50991 539 aaKnown RBP11.23□□□□□ -0.61
LAMA1-204ENST00000488089 CEP126Q9P2H0 1117 aa11.23□□□□□ -0.61
LAMA1-204ENST00000488089 CDKL5O76039 1030 aa11.23□□□□□ -0.61
LAMA1-204ENST00000488089 TTC39AQ5SRH9 613 aa11.23□□□□□ -0.61
LAMA1-204ENST00000488089 GGNBP2Q9H3C7 697 aa11.23□□□□□ -0.61
LAMA1-204ENST00000488089 MBD3O95983 291 aa11.23□□□□□ -0.61
LAMA1-204ENST00000488089 HDGFL1Q5TGJ6 251 aa11.23□□□□□ -0.61
LAMA1-204ENST00000488089 GNAI2P04899 355 aa11.22□□□□□ -0.61
LAMA1-204ENST00000488089 CFAP70Q5T0N1 1121 aa11.22□□□□□ -0.61
LAMA1-204ENST00000488089 ZNF530Q6P9A1 599 aaPredicted RBP11.22□□□□□ -0.61
LAMA1-204ENST00000488089 KIF14Q15058 1648 aa11.22□□□□□ -0.61
LAMA1-204ENST00000488089 TNIP1Q15025 636 aa11.22□□□□□ -0.61
LAMA1-204ENST00000488089 NFKBIBQ15653 356 aa11.22□□□□□ -0.61
LAMA1-204ENST00000488089 HMOX1P09601 288 aa11.21□□□□□ -0.61
LAMA1-204ENST00000488089 PDE3AQ14432 1141 aa11.21□□□□□ -0.61
LAMA1-204ENST00000488089 NUTM2BA6NNL0 878 aaPredicted RBP11.21□□□□□ -0.62
LAMA1-204ENST00000488089 NUTM2EB1AL46 878 aaPredicted RBP11.21□□□□□ -0.62
LAMA1-204ENST00000488089 IGHMBP2P38935 993 aaKnown RBP11.21□□□□□ -0.62
LAMA1-204ENST00000488089 RBM5P52756 815 aaKnown RBP eCLIP11.21□□□□□ -0.62
LAMA1-204ENST00000488089 NUTM2AQ8IVF1 878 aaPredicted RBP11.21□□□□□ -0.62
LAMA1-204ENST00000488089 PANK1Q8TE04 598 aa11.21□□□□□ -0.62
LAMA1-204ENST00000488089 SRCIN1Q9C0H9 1055 aa11.21□□□□□ -0.62
LAMA1-204ENST00000488089 CETN2P41208 172 aa11.21□□□□□ -0.62
LAMA1-204ENST00000488089 ZSCAN29Q8IWY8 852 aaPredicted RBP11.21□□□□□ -0.62
LAMA1-204ENST00000488089 CCDC191Q8NCU4 936 aa11.21□□□□□ -0.62
LAMA1-204ENST00000488089 POTEJP0CG39 1038 aa11.2□□□□□ -0.62
LAMA1-204ENST00000488089 ATP2B2Q01814 1243 aa11.2□□□□□ -0.62
LAMA1-204ENST00000488089 SLF2Q8IX21 1173 aa11.2□□□□□ -0.62
LAMA1-204ENST00000488089 GCC1Q96CN9 775 aa11.2□□□□□ -0.62
LAMA1-204ENST00000488089 FAM177BA6PVY3 158 aa11.2□□□□□ -0.62
LAMA1-204ENST00000488089 SMC2O95347 1197 aa11.2□□□□□ -0.62
LAMA1-204ENST00000488089 EZRP15311 586 aaKnown RBP11.2□□□□□ -0.62
LAMA1-204ENST00000488089 MTHFSP49914 203 aa11.2□□□□□ -0.62
LAMA1-204ENST00000488089 ATF7IPQ6VMQ6 1270 aa11.2□□□□□ -0.62
LAMA1-204ENST00000488089 WASF1Q92558 559 aa11.19□□□□□ -0.62
LAMA1-204ENST00000488089 RAPGEF3O95398 923 aa11.19□□□□□ -0.62
LAMA1-204ENST00000488089 STK38Q15208 465 aa11.19□□□□□ -0.62
LAMA1-204ENST00000488089 TCP11L2Q8N4U5 519 aa11.19□□□□□ -0.62
LAMA1-204ENST00000488089 DDX54Q8TDD1 881 aaKnown RBP11.19□□□□□ -0.62
LAMA1-204ENST00000488089 KRT32Q14532 448 aa11.19□□□□□ -0.62
LAMA1-204ENST00000488089 HSP90AB3PQ58FF7 597 aa11.19□□□□□ -0.62
LAMA1-204ENST00000488089 GPATCH8Q9UKJ3 1502 aaKnown RBP11.19□□□□□ -0.62
LAMA1-204ENST00000488089 NUTM2GQ5VZR2 741 aa11.18□□□□□ -0.62
LAMA1-204ENST00000488089 ZNF592Q92610 1267 aa11.18□□□□□ -0.62
LAMA1-204ENST00000488089 PPP4R3AQ6IN85 833 aa11.18□□□□□ -0.62
LAMA1-204ENST00000488089 FOXD4L6Q3SYB3 417 aaPredicted RBP11.18□□□□□ -0.62
LAMA1-204ENST00000488089 FOXD4L3Q6VB84 417 aaPredicted RBP11.18□□□□□ -0.62
LAMA1-204ENST00000488089 CAGE1Q8TC20 777 aa11.18□□□□□ -0.62
LAMA1-204ENST00000488089 CABP2Q9NPB3 220 aa11.18□□□□□ -0.62
LAMA1-204ENST00000488089 MTMR7Q9Y216 660 aa11.18□□□□□ -0.62
LAMA1-204ENST00000488089 ATAD2Q6PL18 1390 aa11.18□□□□□ -0.62
LAMA1-204ENST00000488089 PPP1R12BO60237 982 aaPredicted RBP11.18□□□□□ -0.62
LAMA1-204ENST00000488089 NEBLO76041 1014 aa11.18□□□□□ -0.62
LAMA1-204ENST00000488089 LNPKQ9C0E8 428 aa11.18□□□□□ -0.62
LAMA1-204ENST00000488089 AEBP1Q8IUX7 1158 aa11.17□□□□□ -0.62
LAMA1-204ENST00000488089 DNAJC2Q99543 621 aaKnown RBP11.17□□□□□ -0.62
LAMA1-204ENST00000488089 UBAC1Q9BSL1 405 aa11.17□□□□□ -0.62
LAMA1-204ENST00000488089 FAM13BQ9NYF5 915 aa11.17□□□□□ -0.62
LAMA1-204ENST00000488089 RALGAPBQ86X10 1494 aa11.17□□□□□ -0.62
LAMA1-204ENST00000488089 CCDC69A6NI79 296 aa11.17□□□□□ -0.62
LAMA1-204ENST00000488089 RAPGEF6Q8TEU7 1601 aa11.17□□□□□ -0.62
LAMA1-204ENST00000488089 TWISTNBQ3B726 338 aaPredicted RBP11.17□□□□□ -0.62
LAMA1-204ENST00000488089 ZPR1O75312 459 aa11.16□□□□□ -0.62
LAMA1-204ENST00000488089 NEFHP12036 1026 aa11.16□□□□□ -0.62
LAMA1-204ENST00000488089 PRKAR2BP31323 418 aa11.16□□□□□ -0.62
LAMA1-204ENST00000488089 RABEP1Q15276 862 aa11.16□□□□□ -0.62
LAMA1-204ENST00000488089 NOM1Q5C9Z4 860 aaKnown RBP11.16□□□□□ -0.62
LAMA1-204ENST00000488089 TMEM87AQ8NBN3 555 aa11.16□□□□□ -0.62
LAMA1-204ENST00000488089 AKAP2Q9Y2D5 859 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms