RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 CLP1Q92989 425 aaKnown RBP5.4□□□□□ -1.54
GPNMB-212ENST00000487890 RBM47A0AV96 593 aaKnown RBP5.39□□□□□ -1.55
GPNMB-212ENST00000487890 SOWAHDA6NJG2 315 aa5.39□□□□□ -1.55
GPNMB-212ENST00000487890 ATP5J2-PTCD1G3V325 749 aa5.39□□□□□ -1.55
GPNMB-212ENST00000487890 TK2O00142 265 aa5.39□□□□□ -1.55
GPNMB-212ENST00000487890 ATP2B4P23634 1241 aa5.39□□□□□ -1.55
GPNMB-212ENST00000487890 SERPINB4P48594 390 aa5.39□□□□□ -1.55
GPNMB-212ENST00000487890 PTK2Q05397 1052 aa5.39□□□□□ -1.55
GPNMB-212ENST00000487890 DPYDQ12882 1025 aa5.39□□□□□ -1.55
GPNMB-212ENST00000487890 PDXDC2PQ6P474 469 aa5.39□□□□□ -1.55
GPNMB-212ENST00000487890 FAM160A2Q8N612 972 aaPredicted RBP5.39□□□□□ -1.55
GPNMB-212ENST00000487890 PRR14Q9BWN1 585 aa5.39□□□□□ -1.55
GPNMB-212ENST00000487890 EVA1BQ9NVM1 165 aa5.39□□□□□ -1.55
GPNMB-212ENST00000487890 CHIC2Q9UKJ5 165 aa5.39□□□□□ -1.55
GPNMB-212ENST00000487890 GPSM3Q9Y4H4 160 aa5.39□□□□□ -1.55
GPNMB-212ENST00000487890 LAMC3Q9Y6N6 1575 aa5.38□□□□□ -1.55
GPNMB-212ENST00000487890 NR1I2O75469 434 aa5.38□□□□□ -1.55
GPNMB-212ENST00000487890 CCNYL3P0C7X3 344 aa5.38□□□□□ -1.55
GPNMB-212ENST00000487890 PPP4CP60510 307 aa5.38□□□□□ -1.55
GPNMB-212ENST00000487890 CLDN10P78369 228 aa5.38□□□□□ -1.55
GPNMB-212ENST00000487890 TRAF7Q6Q0C0 670 aa5.38□□□□□ -1.55
GPNMB-212ENST00000487890 OGFOD1Q8N543 542 aa5.38□□□□□ -1.55
GPNMB-212ENST00000487890 ADAM32Q8TC27 787 aa5.38□□□□□ -1.55
GPNMB-212ENST00000487890 MYT1LQ9UL68 1186 aa5.38□□□□□ -1.55
GPNMB-212ENST00000487890 HPS5Q9UPZ3 1129 aa5.38□□□□□ -1.55
GPNMB-212ENST00000487890 PCDHB3Q9Y5E6 796 aa5.38□□□□□ -1.55
GPNMB-212ENST00000487890 ZBTB7BO15156 539 aaPredicted RBP5.37□□□□□ -1.55
GPNMB-212ENST00000487890 LZTS3O60299 673 aaPredicted RBP5.37□□□□□ -1.55
GPNMB-212ENST00000487890 DXOO77932 396 aaKnown RBP5.37□□□□□ -1.55
GPNMB-212ENST00000487890 DKK1O94907 266 aa5.37□□□□□ -1.55
GPNMB-212ENST00000487890 BCAMP50895 628 aa5.37□□□□□ -1.55
GPNMB-212ENST00000487890 MCCD1P59942 119 aaPredicted RBP5.37□□□□□ -1.55
GPNMB-212ENST00000487890 ARMC2Q8NEN0 867 aa5.37□□□□□ -1.55
GPNMB-212ENST00000487890 MARVELD3Q96A59 401 aa5.37□□□□□ -1.55
GPNMB-212ENST00000487890 ZNF594Q96JF6 807 aaPredicted RBP5.37□□□□□ -1.55
GPNMB-212ENST00000487890 SOWAHBA6NEL2 793 aa5.36□□□□□ -1.55
GPNMB-212ENST00000487890 FAM205CA6NFA0 338 aa5.36□□□□□ -1.55
GPNMB-212ENST00000487890 HRO43593 1189 aa5.36□□□□□ -1.55
GPNMB-212ENST00000487890 EMP3P54852 163 aa5.36□□□□□ -1.55
GPNMB-212ENST00000487890 EML3Q32P44 896 aa5.36□□□□□ -1.55
GPNMB-212ENST00000487890 MAP7D1Q3KQU3 841 aa5.36□□□□□ -1.55
GPNMB-212ENST00000487890 MSS51Q4VC12 460 aa5.36□□□□□ -1.55
GPNMB-212ENST00000487890 GPKOWQ92917 476 aaPredicted RBP eCLIP5.36□□□□□ -1.55
GPNMB-212ENST00000487890 CCDC85AQ96PX6 553 aaPredicted RBP5.36□□□□□ -1.55
GPNMB-212ENST00000487890 NUDT12Q9BQG2 462 aa5.36□□□□□ -1.55
GPNMB-212ENST00000487890 ARHGAP9Q9BRR9 750 aa5.36□□□□□ -1.55
GPNMB-212ENST00000487890 PRDM9Q9NQV7 894 aa5.36□□□□□ -1.55
GPNMB-212ENST00000487890 IGSF5Q9NSI5 407 aa5.36□□□□□ -1.55
GPNMB-212ENST00000487890 DNAAF2Q9NVR5 837 aaKnown RBP5.36□□□□□ -1.55
GPNMB-212ENST00000487890 KIAA1522Q9P206 1035 aaPredicted RBP5.36□□□□□ -1.55
GPNMB-212ENST00000487890 KIAA1024Q9UPX6 916 aa5.36□□□□□ -1.55
GPNMB-212ENST00000487890 THOC2Q8NI27 1593 aaKnown RBP5.36□□□□□ -1.55
GPNMB-212ENST00000487890 PDS5BQ9NTI5 1447 aa5.35□□□□□ -1.55
GPNMB-212ENST00000487890 POTEB3A0JP26 581 aa5.35□□□□□ -1.55
GPNMB-212ENST00000487890 ST18O60284 1047 aa5.35□□□□□ -1.55
GPNMB-212ENST00000487890 MMP16P51512 607 aa5.35□□□□□ -1.55
GPNMB-212ENST00000487890 SWI5Q1ZZU3 235 aa5.35□□□□□ -1.55
GPNMB-212ENST00000487890 PTCRAQ6ISU1 281 aaPredicted RBP5.35□□□□□ -1.55
GPNMB-212ENST00000487890 ADGRD1Q6QNK2 874 aa5.35□□□□□ -1.55
GPNMB-212ENST00000487890 POTEBQ6S5H4 581 aa5.35□□□□□ -1.55
GPNMB-212ENST00000487890 ANKK1Q8NFD2 765 aa5.35□□□□□ -1.55
GPNMB-212ENST00000487890 TSR3Q9UJK0 312 aaKnown RBP5.35□□□□□ -1.55
GPNMB-212ENST00000487890 NOD1Q9Y239 953 aa5.35□□□□□ -1.55
GPNMB-212ENST00000487890 PRMT3O60678 531 aa5.34□□□□□ -1.55
GPNMB-212ENST00000487890 ZNF16P17020 682 aaPredicted RBP5.34□□□□□ -1.55
GPNMB-212ENST00000487890 ERCC3P19447 782 aa5.34□□□□□ -1.55
GPNMB-212ENST00000487890 MARSP56192 900 aaKnown RBP5.34□□□□□ -1.55
GPNMB-212ENST00000487890 NBPF14Q5TI25 921 aa5.34□□□□□ -1.55
GPNMB-212ENST00000487890 SH3BP5LQ7L8J4 393 aa5.34□□□□□ -1.55
GPNMB-212ENST00000487890 ZBTB33Q86T24 672 aa5.34□□□□□ -1.55
GPNMB-212ENST00000487890 TRIM50Q86XT4 487 aa5.34□□□□□ -1.55
GPNMB-212ENST00000487890 LARGE2Q8N3Y3 721 aa5.34□□□□□ -1.55
GPNMB-212ENST00000487890 C1orf216Q8TAB5 229 aa5.34□□□□□ -1.55
GPNMB-212ENST00000487890 ZNF592Q92610 1267 aa5.34□□□□□ -1.55
GPNMB-212ENST00000487890 PRIMPOLQ96LW4 560 aa5.34□□□□□ -1.55
GPNMB-212ENST00000487890 SPSB2Q99619 263 aa5.34□□□□□ -1.55
GPNMB-212ENST00000487890 CADPSQ9ULU8 1353 aa5.33□□□□□ -1.56
GPNMB-212ENST00000487890 GOLGA8CPA6NN73 597 aa5.33□□□□□ -1.56
GPNMB-212ENST00000487890 SFI1A8K8P3 1242 aa5.33□□□□□ -1.56
GPNMB-212ENST00000487890 GIGYF1O75420 1035 aaPredicted RBP5.33□□□□□ -1.56
GPNMB-212ENST00000487890 LGR5O75473 907 aa5.33□□□□□ -1.56
GPNMB-212ENST00000487890 ATP1A2P50993 1020 aa5.33□□□□□ -1.56
GPNMB-212ENST00000487890 LSM11P83369 360 aaKnown RBP eCLIP5.33□□□□□ -1.56
GPNMB-212ENST00000487890 OCLNQ16625 522 aa5.33□□□□□ -1.56
GPNMB-212ENST00000487890 OXLD1Q5BKU9 147 aa5.33□□□□□ -1.56
GPNMB-212ENST00000487890 TAS1R3Q7RTX0 852 aa5.33□□□□□ -1.56
GPNMB-212ENST00000487890 DZIP3Q86Y13 1208 aaKnown RBP5.33□□□□□ -1.56
GPNMB-212ENST00000487890 MRRFQ96E11 262 aaKnown RBP5.33□□□□□ -1.56
GPNMB-212ENST00000487890 SIRT1Q96EB6 747 aa5.33□□□□□ -1.56
GPNMB-212ENST00000487890 BIN2Q9UBW5 565 aaPredicted RBP5.33□□□□□ -1.56
GPNMB-212ENST00000487890 DOLKQ9UPQ8 538 aa5.33□□□□□ -1.56
GPNMB-212ENST00000487890 TOP2AP11388 1531 aaKnown RBP5.33□□□□□ -1.56
GPNMB-212ENST00000487890 RSF1Q96T23 1441 aaPredicted RBP5.32□□□□□ -1.56
GPNMB-212ENST00000487890 ANKRD33BA6NCL7 494 aa5.32□□□□□ -1.56
GPNMB-212ENST00000487890 SEC13P55735 322 aa5.32□□□□□ -1.56
GPNMB-212ENST00000487890 COPS2P61201 443 aa5.32□□□□□ -1.56
GPNMB-212ENST00000487890 GTF2IP78347 998 aa5.32□□□□□ -1.56
GPNMB-212ENST00000487890 CCDC102BQ68D86 513 aa5.32□□□□□ -1.56
GPNMB-212ENST00000487890 SIX5Q8N196 739 aa5.32□□□□□ -1.56
GPNMB-212ENST00000487890 BCL2L13Q9BXK5 485 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms