RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 PRKAR2BP31323 418 aa8.06□□□□□ -1.12
VAMP3-203ENST00000487194 TMPOP42166 694 aaKnown RBP8.06□□□□□ -1.12
VAMP3-203ENST00000487194 SLFN5Q08AF3 891 aa8.06□□□□□ -1.12
VAMP3-203ENST00000487194 HSP90AB2PQ58FF8 381 aa8.06□□□□□ -1.12
VAMP3-203ENST00000487194 ERICH6BQ5W0A0 696 aa8.06□□□□□ -1.12
VAMP3-203ENST00000487194 TRMT2AQ8IZ69 625 aaKnown RBP8.06□□□□□ -1.12
VAMP3-203ENST00000487194 CDCA7LQ96GN5 454 aa8.06□□□□□ -1.12
VAMP3-203ENST00000487194 SLIT3O75094 1523 aa8.06□□□□□ -1.12
VAMP3-203ENST00000487194 ARHGEF10O15013 1369 aa8.06□□□□□ -1.12
VAMP3-203ENST00000487194 PEAK1Q9H792 1746 aa8.06□□□□□ -1.12
VAMP3-203ENST00000487194 USP19O94966 1318 aa8.05□□□□□ -1.12
VAMP3-203ENST00000487194 NFAT5O94916 1531 aa8.05□□□□□ -1.12
VAMP3-203ENST00000487194 GCP02774 474 aa8.05□□□□□ -1.12
VAMP3-203ENST00000487194 HMOX1P09601 288 aa8.05□□□□□ -1.12
VAMP3-203ENST00000487194 XPCQ01831 940 aaPredicted RBP8.05□□□□□ -1.12
VAMP3-203ENST00000487194 LMOD3Q0VAK6 560 aa8.05□□□□□ -1.12
VAMP3-203ENST00000487194 FKBP8Q14318 412 aa8.05□□□□□ -1.12
VAMP3-203ENST00000487194 NEUROD2Q15784 382 aa8.05□□□□□ -1.12
VAMP3-203ENST00000487194 DUSP27Q5VZP5 1158 aa8.05□□□□□ -1.12
VAMP3-203ENST00000487194 LMOD2Q6P5Q4 547 aa8.05□□□□□ -1.12
VAMP3-203ENST00000487194 BRINP3Q76B58 766 aa8.05□□□□□ -1.12
VAMP3-203ENST00000487194 IP6K1Q92551 441 aa8.05□□□□□ -1.12
VAMP3-203ENST00000487194 RCAN3Q9UKA8 241 aa8.05□□□□□ -1.12
VAMP3-203ENST00000487194 IL16Q14005 1332 aa8.04□□□□□ -1.12
VAMP3-203ENST00000487194 RNF123Q5XPI4 1314 aa8.04□□□□□ -1.12
VAMP3-203ENST00000487194 TNS3Q68CZ2 1445 aa8.04□□□□□ -1.12
VAMP3-203ENST00000487194 RIPK4P57078 832 aa8.04□□□□□ -1.12
VAMP3-203ENST00000487194 CALD1Q05682 793 aaKnown RBP8.04□□□□□ -1.12
VAMP3-203ENST00000487194 NFE2L2Q16236 605 aa8.04□□□□□ -1.12
VAMP3-203ENST00000487194 SULT6B1Q6IMI4 303 aa8.04□□□□□ -1.12
VAMP3-203ENST00000487194 MYH16Q9H6N6 1097 aa8.04□□□□□ -1.12
VAMP3-203ENST00000487194 RRP7AQ9Y3A4 280 aaKnown RBP8.04□□□□□ -1.12
VAMP3-203ENST00000487194 PXDNQ92626 1479 aa8.04□□□□□ -1.12
VAMP3-203ENST00000487194 ALS2Q96Q42 1657 aa8.04□□□□□ -1.12
VAMP3-203ENST00000487194 SPATA31A3Q5VYP0 1347 aa8.03□□□□□ -1.12
VAMP3-203ENST00000487194 PHRF1Q9P1Y6 1649 aaKnown RBP8.03□□□□□ -1.12
VAMP3-203ENST00000487194 KDRP35968 1356 aa8.03□□□□□ -1.12
VAMP3-203ENST00000487194 ARHGEF25Q86VW2 580 aa8.03□□□□□ -1.12
VAMP3-203ENST00000487194 RGPD1P0DJD0 1748 aa8.03□□□□□ -1.12
VAMP3-203ENST00000487194 SOS2Q07890 1332 aaPredicted RBP8.03□□□□□ -1.12
VAMP3-203ENST00000487194 IGSF1Q8N6C5 1336 aa8.03□□□□□ -1.12
VAMP3-203ENST00000487194 TRIM35Q9UPQ4 493 aa8.02□□□□□ -1.13
VAMP3-203ENST00000487194 LTN1O94822 1766 aa8.02□□□□□ -1.13
VAMP3-203ENST00000487194 LTBP4Q8N2S1 1624 aa8.01□□□□□ -1.13
VAMP3-203ENST00000487194 CT47B1P0C2W7 299 aaPredicted RBP8.01□□□□□ -1.13
VAMP3-203ENST00000487194 RRP1P56182 461 aaKnown RBP8.01□□□□□ -1.13
VAMP3-203ENST00000487194 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.01□□□□□ -1.13
VAMP3-203ENST00000487194 DDX17Q92841 729 aaKnown RBP8.01□□□□□ -1.13
VAMP3-203ENST00000487194 PHACTR3Q96KR7 559 aa8.01□□□□□ -1.13
VAMP3-203ENST00000487194 EYA1Q99502 592 aa8.01□□□□□ -1.13
VAMP3-203ENST00000487194 SPINK5Q9NQ38 1064 aaPredicted RBP8.01□□□□□ -1.13
VAMP3-203ENST00000487194 MED1Q15648 1581 aaPredicted RBP8.01□□□□□ -1.13
VAMP3-203ENST00000487194 ABCC6O95255 1503 aa8□□□□□ -1.13
VAMP3-203ENST00000487194 ZBTB7CA1YPR0 619 aa8□□□□□ -1.13
VAMP3-203ENST00000487194 AEBP1Q8IUX7 1158 aa8□□□□□ -1.13
VAMP3-203ENST00000487194 GAS2L2Q8NHY3 880 aa8□□□□□ -1.13
VAMP3-203ENST00000487194 CPDO75976 1380 aa7.99□□□□□ -1.13
VAMP3-203ENST00000487194 HTATSF1O43719 755 aaKnown RBP7.99□□□□□ -1.13
VAMP3-203ENST00000487194 GNAI1P63096 354 aa7.99□□□□□ -1.13
VAMP3-203ENST00000487194 LTV1Q96GA3 475 aaPredicted RBP7.99□□□□□ -1.13
VAMP3-203ENST00000487194 NHSL1Q5SYE7 1610 aa7.99□□□□□ -1.13
VAMP3-203ENST00000487194 ZC3H6P61129 1189 aaKnown RBP7.98□□□□□ -1.13
VAMP3-203ENST00000487194 ANKRD24Q8TF21 1146 aa7.98□□□□□ -1.13
VAMP3-203ENST00000487194 RTF1Q92541 710 aaKnown RBP7.98□□□□□ -1.13
VAMP3-203ENST00000487194 IFT57Q9NWB7 429 aa7.98□□□□□ -1.13
VAMP3-203ENST00000487194 FANCIQ9NVI1 1328 aa7.98□□□□□ -1.13
VAMP3-203ENST00000487194 PLEKHG5O94827 1062 aa7.97□□□□□ -1.13
VAMP3-203ENST00000487194 HAP1P54257 671 aaPredicted RBP7.97□□□□□ -1.13
VAMP3-203ENST00000487194 IRX6P78412 446 aaPredicted RBP7.97□□□□□ -1.13
VAMP3-203ENST00000487194 MTHFSDQ2M296 383 aaKnown RBP7.97□□□□□ -1.13
VAMP3-203ENST00000487194 LRRC59Q96AG4 307 aaKnown RBP7.97□□□□□ -1.13
VAMP3-203ENST00000487194 PPP4R2Q9NY27 417 aa7.97□□□□□ -1.13
VAMP3-203ENST00000487194 ERBB3P21860 1342 aa7.97□□□□□ -1.13
VAMP3-203ENST00000487194 PLEKHG2Q9H7P9 1386 aa7.97□□□□□ -1.13
VAMP3-203ENST00000487194 NCAPD2Q15021 1401 aa7.96□□□□□ -1.13
VAMP3-203ENST00000487194 CRYBG1Q9Y4K1 1723 aa7.96□□□□□ -1.14
VAMP3-203ENST00000487194 TOM1O60784 492 aa7.96□□□□□ -1.14
VAMP3-203ENST00000487194 AMOTQ4VCS5 1084 aa7.96□□□□□ -1.14
VAMP3-203ENST00000487194 NBPF6Q5VWK0 638 aa7.96□□□□□ -1.14
VAMP3-203ENST00000487194 CABLES1Q8TDN4 633 aa7.96□□□□□ -1.14
VAMP3-203ENST00000487194 ZNF428Q96B54 188 aa7.96□□□□□ -1.14
VAMP3-203ENST00000487194 NBPF4Q96M43 638 aa7.96□□□□□ -1.14
VAMP3-203ENST00000487194 CFAP44Q96MT7 982 aa7.96□□□□□ -1.14
VAMP3-203ENST00000487194 AHDC1Q5TGY3 1603 aaPredicted RBP7.96□□□□□ -1.14
VAMP3-203ENST00000487194 KIAA0232Q92628 1395 aa7.96□□□□□ -1.14
VAMP3-203ENST00000487194 GNAT3A8MTJ3 354 aa7.95□□□□□ -1.14
VAMP3-203ENST00000487194 ZNF853P0CG23 659 aa7.95□□□□□ -1.14
VAMP3-203ENST00000487194 RARSP54136 660 aaKnown RBP7.95□□□□□ -1.14
VAMP3-203ENST00000487194 EXOSC9Q06265 439 aaKnown RBP7.95□□□□□ -1.14
VAMP3-203ENST00000487194 PLEKHO1Q53GL0 409 aaPredicted RBP7.95□□□□□ -1.14
VAMP3-203ENST00000487194 PELP1Q8IZL8 1130 aaKnown RBP7.95□□□□□ -1.14
VAMP3-203ENST00000487194 TSR2Q969E8 191 aaKnown RBP7.95□□□□□ -1.14
VAMP3-203ENST00000487194 AXIN2Q9Y2T1 843 aa7.95□□□□□ -1.14
VAMP3-203ENST00000487194 LAS1LQ9Y4W2 734 aaKnown RBP7.95□□□□□ -1.14
VAMP3-203ENST00000487194 DLG5Q8TDM6 1919 aa7.95□□□□□ -1.14
VAMP3-203ENST00000487194 FAM208AQ9UK61 1670 aaKnown RBP7.95□□□□□ -1.14
VAMP3-203ENST00000487194 ROBO1Q9Y6N7 1651 aa7.95□□□□□ -1.14
VAMP3-203ENST00000487194 COL18A1P39060 1754 aa7.94□□□□□ -1.14
VAMP3-203ENST00000487194 CSB-PGBD3P0DP91 1061 aa7.94□□□□□ -1.14
VAMP3-203ENST00000487194 CANXP27824 592 aaKnown RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms