RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 C1QTNF8P60827 252 aa11.23□□□□□ -0.61
PDPN-205ENST00000487038 GCP02774 474 aa11.22□□□□□ -0.61
PDPN-205ENST00000487038 PAPPAQ13219 1627 aa11.22□□□□□ -0.61
PDPN-205ENST00000487038 PPIP5K1Q6PFW1 1433 aa11.22□□□□□ -0.61
PDPN-205ENST00000487038 AATKQ6ZMQ8 1374 aa11.22□□□□□ -0.61
PDPN-205ENST00000487038 DCAF11Q8TEB1 546 aa11.22□□□□□ -0.61
PDPN-205ENST00000487038 CDCA7Q9BWT1 371 aaPredicted RBP11.22□□□□□ -0.61
PDPN-205ENST00000487038 CDK19Q9BWU1 502 aa11.22□□□□□ -0.61
PDPN-205ENST00000487038 FHDC1Q9C0D6 1143 aaPredicted RBP11.22□□□□□ -0.61
PDPN-205ENST00000487038 MTFR1LQ9H019 292 aa11.22□□□□□ -0.61
PDPN-205ENST00000487038 KDM2AQ9Y2K7 1162 aa11.22□□□□□ -0.61
PDPN-205ENST00000487038 GOLGB1Q14789 3259 aaKnown RBP11.22□□□□□ -0.61
PDPN-205ENST00000487038 BTAF1O14981 1849 aa11.21□□□□□ -0.61
PDPN-205ENST00000487038 TRPM1Q7Z4N2 1603 aa11.21□□□□□ -0.61
PDPN-205ENST00000487038 PLEKHG3A1L390 1219 aa11.21□□□□□ -0.61
PDPN-205ENST00000487038 ZBTB7CA1YPR0 619 aa11.21□□□□□ -0.61
PDPN-205ENST00000487038 PTGER2P43116 358 aa11.21□□□□□ -0.61
PDPN-205ENST00000487038 IFFO2Q5TF58 517 aa11.21□□□□□ -0.61
PDPN-205ENST00000487038 TOM1L2Q6ZVM7 507 aa11.21□□□□□ -0.61
PDPN-205ENST00000487038 SYT17Q9BSW7 474 aa11.21□□□□□ -0.61
PDPN-205ENST00000487038 ATF5Q9Y2D1 282 aaPredicted RBP11.21□□□□□ -0.61
PDPN-205ENST00000487038 MAP3K5Q99683 1374 aa11.2□□□□□ -0.62
PDPN-205ENST00000487038 SLC15A2Q16348 729 aa11.2□□□□□ -0.62
PDPN-205ENST00000487038 COL24A1Q17RW2 1714 aa11.2□□□□□ -0.62
PDPN-205ENST00000487038 ABCC6O95255 1503 aa11.19□□□□□ -0.62
PDPN-205ENST00000487038 WDR17Q8IZU2 1322 aa11.19□□□□□ -0.62
PDPN-205ENST00000487038 GIGYF1O75420 1035 aaPredicted RBP11.19□□□□□ -0.62
PDPN-205ENST00000487038 TXNRD1Q16881 649 aa11.19□□□□□ -0.62
PDPN-205ENST00000487038 PDGFDQ9GZP0 370 aaPredicted RBP11.19□□□□□ -0.62
PDPN-205ENST00000487038 USP6P35125 1406 aa11.18□□□□□ -0.62
PDPN-205ENST00000487038 CPSF1Q10570 1443 aaKnown RBP11.18□□□□□ -0.62
PDPN-205ENST00000487038 TNS2Q63HR2 1409 aa11.18□□□□□ -0.62
PDPN-205ENST00000487038 LTN1O94822 1766 aa11.18□□□□□ -0.62
PDPN-205ENST00000487038 SHANK3Q9BYB0 1731 aa11.18□□□□□ -0.62
PDPN-205ENST00000487038 TUBGCP6Q96RT7 1819 aa11.17□□□□□ -0.62
PDPN-205ENST00000487038 SRPK2P78362 688 aaKnown RBP11.17□□□□□ -0.62
PDPN-205ENST00000487038 ARXQ96QS3 562 aa11.17□□□□□ -0.62
PDPN-205ENST00000487038 NLRP6P59044 892 aa11.16□□□□□ -0.62
PDPN-205ENST00000487038 PROM2Q8N271 834 aa11.16□□□□□ -0.62
PDPN-205ENST00000487038 MARCH10Q8NA82 808 aaPredicted RBP11.16□□□□□ -0.62
PDPN-205ENST00000487038 CCDC7Q96M83 1385 aa11.16□□□□□ -0.62
PDPN-205ENST00000487038 RAB3GAP2Q9H2M9 1393 aa11.16□□□□□ -0.62
PDPN-205ENST00000487038 GPR162Q16538 588 aa11.15□□□□□ -0.62
PDPN-205ENST00000487038 SGIP1Q9BQI5 828 aa11.15□□□□□ -0.62
PDPN-205ENST00000487038 KAT6BQ8WYB5 2073 aa11.15□□□□□ -0.63
PDPN-205ENST00000487038 FAM208AQ9UK61 1670 aaKnown RBP11.14□□□□□ -0.63
PDPN-205ENST00000487038 EXOC5O00471 708 aa11.14□□□□□ -0.63
PDPN-205ENST00000487038 CSB-PGBD3P0DP91 1061 aa11.14□□□□□ -0.63
PDPN-205ENST00000487038 PTF1AQ7RTS3 328 aa11.14□□□□□ -0.63
PDPN-205ENST00000487038 KCNH5Q8NCM2 988 aa11.14□□□□□ -0.63
PDPN-205ENST00000487038 MON2Q7Z3U7 1717 aa11.14□□□□□ -0.63
PDPN-205ENST00000487038 USP54Q70EL1 1684 aa11.14□□□□□ -0.63
PDPN-205ENST00000487038 CARD10Q9BWT7 1032 aa11.13□□□□□ -0.63
PDPN-205ENST00000487038 CENPJQ9HC77 1338 aaPredicted RBP11.12□□□□□ -0.63
PDPN-205ENST00000487038 POLD1P28340 1107 aa11.12□□□□□ -0.63
PDPN-205ENST00000487038 KLHL34Q8N239 644 aa11.12□□□□□ -0.63
PDPN-205ENST00000487038 NFAT5O94916 1531 aa11.12□□□□□ -0.63
PDPN-205ENST00000487038 LY75O60449 1722 aa11.12□□□□□ -0.63
PDPN-205ENST00000487038 PELP1Q8IZL8 1130 aaKnown RBP11.11□□□□□ -0.63
PDPN-205ENST00000487038 CABP2Q9NPB3 220 aa11.11□□□□□ -0.63
PDPN-205ENST00000487038 DOT1LQ8TEK3 1739 aa11.11□□□□□ -0.63
PDPN-205ENST00000487038 SLC16A10Q8TF71 515 aa11.1□□□□□ -0.63
PDPN-205ENST00000487038 AXIN2Q9Y2T1 843 aa11.1□□□□□ -0.63
PDPN-205ENST00000487038 ARHGEF25Q86VW2 580 aa11.09□□□□□ -0.63
PDPN-205ENST00000487038 CABP1Q9NZU7 370 aa11.09□□□□□ -0.63
PDPN-205ENST00000487038 TTC21AQ8NDW8 1320 aa11.09□□□□□ -0.63
PDPN-205ENST00000487038 ACSBG1Q96GR2 724 aa11.08□□□□□ -0.64
PDPN-205ENST00000487038 SOX12O15370 315 aa11.07□□□□□ -0.64
PDPN-205ENST00000487038 GRIN3BO60391 1043 aa11.07□□□□□ -0.64
PDPN-205ENST00000487038 ZNF692Q9BU19 519 aaPredicted RBP11.07□□□□□ -0.64
PDPN-205ENST00000487038 EVC2Q86UK5 1308 aa11.07□□□□□ -0.64
PDPN-205ENST00000487038 C5P01031 1676 aa11.06□□□□□ -0.64
PDPN-205ENST00000487038 ZNF827Q17R98 1081 aa11.06□□□□□ -0.64
PDPN-205ENST00000487038 SLC27A3Q5K4L6 730 aa11.06□□□□□ -0.64
PDPN-205ENST00000487038 TTC21BQ7Z4L5 1316 aa11.06□□□□□ -0.64
PDPN-205ENST00000487038 IL2RBP14784 551 aa11.05□□□□□ -0.64
PDPN-205ENST00000487038 ERBB3P21860 1342 aa11.05□□□□□ -0.64
PDPN-205ENST00000487038 ATP10DQ9P241 1426 aa11.04□□□□□ -0.64
PDPN-205ENST00000487038 KTN1Q86UP2 1357 aaKnown RBP11.03□□□□□ -0.64
PDPN-205ENST00000487038 TAF1LQ8IZX4 1826 aa11.03□□□□□ -0.64
PDPN-205ENST00000487038 NBPF1Q3BBV0 1214 aa11.03□□□□□ -0.64
PDPN-205ENST00000487038 AKT1S1Q96B36 256 aa11.03□□□□□ -0.64
PDPN-205ENST00000487038 NLRP2Q9NX02 1062 aa11.03□□□□□ -0.64
PDPN-205ENST00000487038 TFCP2L1Q9NZI6 479 aa11.03□□□□□ -0.64
PDPN-205ENST00000487038 PNPLA7Q6ZV29 1317 aa11.03□□□□□ -0.64
PDPN-205ENST00000487038 NLGN2Q8NFZ4 835 aa11.02□□□□□ -0.65
PDPN-205ENST00000487038 GPBP1L1Q9HC44 474 aaPredicted RBP11.02□□□□□ -0.65
PDPN-205ENST00000487038 LRRC4BQ9NT99 713 aa11.02□□□□□ -0.65
PDPN-205ENST00000487038 RGPD2P0DJD1 1756 aa11□□□□□ -0.65
PDPN-205ENST00000487038 HSPA6P17066 643 aa11□□□□□ -0.65
PDPN-205ENST00000487038 USP31Q70CQ4 1352 aa11□□□□□ -0.65
PDPN-205ENST00000487038 YBX3P16989 372 aaKnown RBP eCLIP10.99□□□□□ -0.65
PDPN-205ENST00000487038 HMGB2P26583 209 aaKnown RBP10.99□□□□□ -0.65
PDPN-205ENST00000487038 ANKRD24Q8TF21 1146 aa10.99□□□□□ -0.65
PDPN-205ENST00000487038 SYTL4Q96C24 671 aaPredicted RBP10.99□□□□□ -0.65
PDPN-205ENST00000487038 ANKRD36BQ8N2N9 1353 aa10.99□□□□□ -0.65
PDPN-205ENST00000487038 MSH5O43196 834 aa10.98□□□□□ -0.65
PDPN-205ENST00000487038 ADCY9O60503 1353 aa10.98□□□□□ -0.65
PDPN-205ENST00000487038 USP47Q96K76 1375 aa10.96□□□□□ -0.65
PDPN-205ENST00000487038 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms