RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 ATF3P18847 181 aa7.58□□□□□ -1.2
SF1-217ENST00000486960 PDE4DQ08499 809 aa7.58□□□□□ -1.2
SF1-217ENST00000486960 PLCD4Q9BRC7 762 aa7.58□□□□□ -1.2
SF1-217ENST00000486960 C19orf44Q9H6X5 657 aa7.58□□□□□ -1.2
SF1-217ENST00000486960 STK25O00506 426 aa7.57□□□□□ -1.2
SF1-217ENST00000486960 UNC5CLQ8IV45 518 aa7.57□□□□□ -1.2
SF1-217ENST00000486960 KLRG1Q96E93 195 aa7.57□□□□□ -1.2
SF1-217ENST00000486960 IGSF5Q9NSI5 407 aa7.57□□□□□ -1.2
SF1-217ENST00000486960 EID1Q9Y6B2 187 aa7.57□□□□□ -1.2
SF1-217ENST00000486960 NRAPQ86VF7 1730 aa7.57□□□□□ -1.2
SF1-217ENST00000486960 THSD7AQ9UPZ6 1657 aa7.57□□□□□ -1.2
SF1-217ENST00000486960 CUL9Q8IWT3 2517 aa7.56□□□□□ -1.2
SF1-217ENST00000486960 USP32Q8NFA0 1604 aa7.56□□□□□ -1.2
SF1-217ENST00000486960 NWD2Q9ULI1 1742 aa7.56□□□□□ -1.2
SF1-217ENST00000486960 KIF3BO15066 747 aa7.56□□□□□ -1.2
SF1-217ENST00000486960 PPP1R15AO75807 674 aaPredicted RBP7.56□□□□□ -1.2
SF1-217ENST00000486960 ZBTB7AO95365 584 aa7.56□□□□□ -1.2
SF1-217ENST00000486960 EXOC8Q8IYI6 725 aa7.56□□□□□ -1.2
SF1-217ENST00000486960 RNF25Q96BH1 459 aaPredicted RBP7.56□□□□□ -1.2
SF1-217ENST00000486960 FAM117AQ9C073 453 aa7.56□□□□□ -1.2
SF1-217ENST00000486960 DHX29Q7Z478 1369 aaKnown RBP7.56□□□□□ -1.2
SF1-217ENST00000486960 LOC102724159A0A0B4J2E5 919 aa7.55□□□□□ -1.2
SF1-217ENST00000486960 PWP2Q15269 919 aaKnown RBP7.55□□□□□ -1.2
SF1-217ENST00000486960 DDRGK1Q96HY6 314 aa7.55□□□□□ -1.2
SF1-217ENST00000486960 DRC1Q96MC2 740 aa7.55□□□□□ -1.2
SF1-217ENST00000486960 ADCY9O60503 1353 aa7.55□□□□□ -1.2
SF1-217ENST00000486960 SOS2Q07890 1332 aaPredicted RBP7.54□□□□□ -1.2
SF1-217ENST00000486960 DCCP43146 1447 aa7.54□□□□□ -1.2
SF1-217ENST00000486960 TRPM2O94759 1503 aa7.54□□□□□ -1.2
SF1-217ENST00000486960 PTPN23Q9H3S7 1636 aa7.54□□□□□ -1.2
SF1-217ENST00000486960 KIF3CO14782 793 aa7.54□□□□□ -1.2
SF1-217ENST00000486960 TRIM66O15016 1216 aa7.54□□□□□ -1.2
SF1-217ENST00000486960 MAFGO15525 162 aa7.54□□□□□ -1.2
SF1-217ENST00000486960 BRD1O95696 1058 aa7.54□□□□□ -1.2
SF1-217ENST00000486960 SGIP1Q9BQI5 828 aa7.54□□□□□ -1.2
SF1-217ENST00000486960 ANO8Q9HCE9 1232 aaPredicted RBP7.54□□□□□ -1.2
SF1-217ENST00000486960 RIPOR2Q9Y4F9 1068 aa7.54□□□□□ -1.2
SF1-217ENST00000486960 ARIH1Q9Y4X5 557 aaPredicted RBP7.54□□□□□ -1.2
SF1-217ENST00000486960 PARD3Q8TEW0 1356 aa7.54□□□□□ -1.2
SF1-217ENST00000486960 UNCXA6NJT0 531 aa7.53□□□□□ -1.2
SF1-217ENST00000486960 RIOK3O14730 519 aaKnown RBP7.53□□□□□ -1.2
SF1-217ENST00000486960 TRIM37O94972 964 aa7.53□□□□□ -1.2
SF1-217ENST00000486960 HSP90AB4PQ58FF6 505 aa7.53□□□□□ -1.2
SF1-217ENST00000486960 MYH16Q9H6N6 1097 aa7.53□□□□□ -1.2
SF1-217ENST00000486960 AATKQ6ZMQ8 1374 aa7.53□□□□□ -1.2
SF1-217ENST00000486960 HSPA1AP0DMV8 641 aaKnown RBP7.52□□□□□ -1.21
SF1-217ENST00000486960 HSPA1BP0DMV9 641 aaKnown RBP7.52□□□□□ -1.21
SF1-217ENST00000486960 GPR162Q16538 588 aa7.52□□□□□ -1.21
SF1-217ENST00000486960 MIER1Q8N108 512 aa7.52□□□□□ -1.21
SF1-217ENST00000486960 XRN1Q8IZH2 1706 aaKnown RBP7.52□□□□□ -1.21
SF1-217ENST00000486960 ABCA3Q99758 1704 aa7.52□□□□□ -1.21
SF1-217ENST00000486960 PTPRUQ92729 1446 aa7.52□□□□□ -1.21
SF1-217ENST00000486960 ANKRD62A6NC57 917 aa7.51□□□□□ -1.21
SF1-217ENST00000486960 ANAPC15P60006 121 aa7.51□□□□□ -1.21
SF1-217ENST00000486960 POTEHQ6S545 545 aa7.51□□□□□ -1.21
SF1-217ENST00000486960 MAP3K5Q99683 1374 aa7.5□□□□□ -1.21
SF1-217ENST00000486960 MARCH6O60337 910 aa7.5□□□□□ -1.21
SF1-217ENST00000486960 APBA3O96018 575 aa7.5□□□□□ -1.21
SF1-217ENST00000486960 VPS72Q15906 364 aa7.5□□□□□ -1.21
SF1-217ENST00000486960 RGPD3A6NKT7 1758 aaPredicted RBP7.5□□□□□ -1.21
SF1-217ENST00000486960 RGPD4Q7Z3J3 1758 aa7.5□□□□□ -1.21
SF1-217ENST00000486960 PLEKHG3A1L390 1219 aa7.49□□□□□ -1.21
SF1-217ENST00000486960 YBX3P16989 372 aaKnown RBP eCLIP7.49□□□□□ -1.214e-8■■□□□ 12.8
SF1-217ENST00000486960 TSR1Q2NL82 804 aaKnown RBP7.49□□□□□ -1.21
SF1-217ENST00000486960 NBPF8Q3BBV2 869 aa7.49□□□□□ -1.21
SF1-217ENST00000486960 NBPF14Q5TI25 921 aa7.49□□□□□ -1.21
SF1-217ENST00000486960 ZBTB47Q9UFB7 747 aaPredicted RBP7.49□□□□□ -1.21
SF1-217ENST00000486960 ADAMTS13Q76LX8 1427 aa7.49□□□□□ -1.21
SF1-217ENST00000486960 ADGRL3Q9HAR2 1447 aa7.49□□□□□ -1.21
SF1-217ENST00000486960 KIAA1107Q9UPP5 1409 aa7.49□□□□□ -1.21
SF1-217ENST00000486960 ARHGEF28Q8N1W1 1705 aaKnown RBP7.49□□□□□ -1.21
SF1-217ENST00000486960 ZC3H4Q9UPT8 1303 aaKnown RBP7.49□□□□□ -1.21
SF1-217ENST00000486960 RBM47A0AV96 593 aaKnown RBP7.48□□□□□ -1.21
SF1-217ENST00000486960 NOS1P29475 1434 aa7.48□□□□□ -1.21
SF1-217ENST00000486960 CLIP1P30622 1438 aa7.48□□□□□ -1.21
SF1-217ENST00000486960 MLLT1Q03111 559 aaPredicted RBP7.48□□□□□ -1.21
SF1-217ENST00000486960 MCM6Q14566 821 aa7.48□□□□□ -1.21
SF1-217ENST00000486960 E2F4Q16254 413 aa7.48□□□□□ -1.21
SF1-217ENST00000486960 FAM98CQ17RN3 349 aaKnown RBP7.48□□□□□ -1.21
SF1-217ENST00000486960 SND1Q7KZF4 910 aaKnown RBP eCLIP7.48□□□□□ -1.21
SF1-217ENST00000486960 SREK1Q8WXA9 508 aaKnown RBP7.48□□□□□ -1.21
SF1-217ENST00000486960 GOPCQ9HD26 462 aa7.48□□□□□ -1.21
SF1-217ENST00000486960 PLSCR2Q9NRY7 297 aa7.48□□□□□ -1.21
SF1-217ENST00000486960 C1orf167Q5SNV9 1468 aa7.48□□□□□ -1.21
SF1-217ENST00000486960 PXDNQ92626 1479 aa7.48□□□□□ -1.21
SF1-217ENST00000486960 COL24A1Q17RW2 1714 aa7.47□□□□□ -1.21
SF1-217ENST00000486960 ZFYVE9O95405 1425 aa7.47□□□□□ -1.21
SF1-217ENST00000486960 GORABQ5T7V8 394 aa7.47□□□□□ -1.21
SF1-217ENST00000486960 PIP4P2Q8N4L2 257 aa7.47□□□□□ -1.21
SF1-217ENST00000486960 HIRIP3Q9BW71 556 aaPredicted RBP7.47□□□□□ -1.21
SF1-217ENST00000486960 SBF2Q86WG5 1849 aa7.47□□□□□ -1.21
SF1-217ENST00000486960 A0A0G2JS52 829 aa7.46□□□□□ -1.22
SF1-217ENST00000486960 VGFO15240 615 aaPredicted RBP7.46□□□□□ -1.22
SF1-217ENST00000486960 PRKAR2AP13861 404 aaKnown RBP7.46□□□□□ -1.22
SF1-217ENST00000486960 RGS19P49795 217 aa7.46□□□□□ -1.22
SF1-217ENST00000486960 MBD5Q9P267 1494 aa7.46□□□□□ -1.22
SF1-217ENST00000486960 NEXMIFQ5QGS0 1516 aa7.46□□□□□ -1.22
SF1-217ENST00000486960 PLEKHG1Q9ULL1 1385 aa7.46□□□□□ -1.22
SF1-217ENST00000486960 HMGB1P1B2RPK0 211 aaPredicted RBP7.45□□□□□ -1.22
SF1-217ENST00000486960 CENPBP07199 599 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms