RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 SMCPP49901 116 aaPredicted RBP11.38□□□□□ -0.59
LTN1-206ENST00000486427 VAC14Q08AM6 782 aa11.38□□□□□ -0.59
LTN1-206ENST00000486427 KLF16Q9BXK1 252 aaPredicted RBP11.38□□□□□ -0.59
LTN1-206ENST00000486427 CDV3Q9UKY7 258 aaKnown RBP11.38□□□□□ -0.59
LTN1-206ENST00000486427 CTC1Q2NKJ3 1217 aa11.37□□□□□ -0.59
LTN1-206ENST00000486427 DACH1Q9UI36 760 aa11.37□□□□□ -0.59
LTN1-206ENST00000486427 AXIN1O15169 862 aa11.36□□□□□ -0.59
LTN1-206ENST00000486427 INTS6LQ5JSJ4 861 aaKnown RBP11.36□□□□□ -0.59
LTN1-206ENST00000486427 TIMP2P16035 220 aa11.35□□□□□ -0.59
LTN1-206ENST00000486427 WDR4P57081 412 aaKnown RBP11.35□□□□□ -0.59
LTN1-206ENST00000486427 NBPF20Q3BBV1 942 aa11.35□□□□□ -0.59
LTN1-206ENST00000486427 CLUAP1Q96AJ1 413 aa11.35□□□□□ -0.59
LTN1-206ENST00000486427 ESPNB1AK53 854 aa11.34□□□□□ -0.59
LTN1-206ENST00000486427 RAD21O60216 631 aa11.34□□□□□ -0.59
LTN1-206ENST00000486427 CCDC116Q8IYX3 515 aa11.34□□□□□ -0.59
LTN1-206ENST00000486427 ZFAND3Q9H8U3 227 aa11.34□□□□□ -0.59
LTN1-206ENST00000486427 CAPN5O15484 640 aaPredicted RBP11.33□□□□□ -0.6
LTN1-206ENST00000486427 GIGYF1O75420 1035 aaPredicted RBP11.33□□□□□ -0.6
LTN1-206ENST00000486427 RAB15P59190 212 aa11.33□□□□□ -0.6
LTN1-206ENST00000486427 ITPKCQ96DU7 683 aa11.33□□□□□ -0.6
LTN1-206ENST00000486427 ZIC2O95409 532 aaPredicted RBP11.32□□□□□ -0.6
LTN1-206ENST00000486427 PPP1R26Q5T8A7 1209 aaPredicted RBP11.32□□□□□ -0.6
LTN1-206ENST00000486427 ZNF330Q9Y3S2 320 aaPredicted RBP11.32□□□□□ -0.6
LTN1-206ENST00000486427 WASHC4Q2M389 1173 aa11.31□□□□□ -0.6
LTN1-206ENST00000486427 GTF3C3Q9Y5Q9 886 aa11.31□□□□□ -0.6
LTN1-206ENST00000486427 MCCD1P59942 119 aaPredicted RBP11.29□□□□□ -0.6
LTN1-206ENST00000486427 EIF4G2P78344 907 aaKnown RBP eCLIP11.29□□□□□ -0.6
LTN1-206ENST00000486427 TMPRSS4Q9NRS4 437 aa11.29□□□□□ -0.6
LTN1-206ENST00000486427 EMILIN1Q9Y6C2 1016 aa11.29□□□□□ -0.6
LTN1-206ENST00000486427 ERVH48-1M5A8F1 160 aa11.28□□□□□ -0.6
LTN1-206ENST00000486427 BMP1P13497 986 aa11.28□□□□□ -0.6
LTN1-206ENST00000486427 CEP126Q9P2H0 1117 aa11.28□□□□□ -0.6
LTN1-206ENST00000486427 POM121CA8CG34 1229 aa11.27□□□□□ -0.61
LTN1-206ENST00000486427 POTECB2RU33 542 aa11.27□□□□□ -0.61
LTN1-206ENST00000486427 DHX9Q08211 1270 aaKnown RBP11.27□□□□□ -0.61
LTN1-206ENST00000486427 TRIM46Q7Z4K8 759 aa11.27□□□□□ -0.61
LTN1-206ENST00000486427 FNBP4Q8N3X1 1017 aaPredicted RBP11.27□□□□□ -0.61
LTN1-206ENST00000486427 ATP13A2Q9NQ11 1180 aa11.27□□□□□ -0.61
LTN1-206ENST00000486427 SEPT12Q8IYM1 358 aa11.26□□□□□ -0.61
LTN1-206ENST00000486427 CBLBQ13191 982 aa11.25□□□□□ -0.61
LTN1-206ENST00000486427 PROSER2Q86WR7 435 aaPredicted RBP11.25□□□□□ -0.61
LTN1-206ENST00000486427 ZNF592Q92610 1267 aa11.25□□□□□ -0.61
LTN1-206ENST00000486427 PGPEP1Q9NXJ5 209 aa11.25□□□□□ -0.61
LTN1-206ENST00000486427 WWC1Q8IX03 1113 aa11.24□□□□□ -0.61
LTN1-206ENST00000486427 ZNF784Q8NCA9 323 aaPredicted RBP11.24□□□□□ -0.61
LTN1-206ENST00000486427 GMPR2Q9P2T1 348 aaKnown RBP11.24□□□□□ -0.61
LTN1-206ENST00000486427 A6NJR5 290 aa11.23□□□□□ -0.61
LTN1-206ENST00000486427 LILRA1O75019 489 aa11.22□□□□□ -0.61
LTN1-206ENST00000486427 SEMA3FQ13275 785 aa11.22□□□□□ -0.61
LTN1-206ENST00000486427 PHTF2Q8N3S3 785 aa11.22□□□□□ -0.61
LTN1-206ENST00000486427 MEIOBQ8N635 442 aa11.22□□□□□ -0.61
LTN1-206ENST00000486427 ADAMTS19Q8TE59 1207 aa11.22□□□□□ -0.61
LTN1-206ENST00000486427 ALG2Q9H553 416 aa11.22□□□□□ -0.61
LTN1-206ENST00000486427 ADD1P35611 737 aaKnown RBP11.21□□□□□ -0.61
LTN1-206ENST00000486427 SOX11P35716 441 aa11.21□□□□□ -0.61
LTN1-206ENST00000486427 TSGA10IPQ3SY00 556 aa11.21□□□□□ -0.61
LTN1-206ENST00000486427 RNF20Q5VTR2 975 aa11.21□□□□□ -0.61
LTN1-206ENST00000486427 MRPL14Q6P1L8 145 aaKnown RBP11.21□□□□□ -0.61
LTN1-206ENST00000486427 CCDC85AQ96PX6 553 aaPredicted RBP11.21□□□□□ -0.61
LTN1-206ENST00000486427 CYLDQ9NQC7 956 aa11.21□□□□□ -0.61
LTN1-206ENST00000486427 Q6ZVU0 165 aa11.2□□□□□ -0.62
LTN1-206ENST00000486427 PCDHB11Q9Y5F2 797 aa11.2□□□□□ -0.62
LTN1-206ENST00000486427 SCTRP47872 440 aa11.18□□□□□ -0.62
LTN1-206ENST00000486427 ZNF787Q6DD87 383 aa11.18□□□□□ -0.62
LTN1-206ENST00000486427 ZFP42Q96MM3 310 aa11.18□□□□□ -0.62
LTN1-206ENST00000486427 PURBQ96QR8 312 aaKnown RBP11.18□□□□□ -0.62
LTN1-206ENST00000486427 CDCA7Q9BWT1 371 aaPredicted RBP11.18□□□□□ -0.62
LTN1-206ENST00000486427 PIK3CDO00329 1044 aa11.17□□□□□ -0.62
LTN1-206ENST00000486427 SLFNL1Q499Z3 407 aa11.17□□□□□ -0.62
LTN1-206ENST00000486427 RNF135Q8IUD6 432 aa11.17□□□□□ -0.62
LTN1-206ENST00000486427 LINC00528Q8N1L1 170 aa11.17□□□□□ -0.62
LTN1-206ENST00000486427 AGBL1Q96MI9 1066 aa11.17□□□□□ -0.62
LTN1-206ENST00000486427 ERVK-9P63128 1117 aa11.16□□□□□ -0.62
LTN1-206ENST00000486427 C6orf118Q5T5N4 469 aa11.16□□□□□ -0.62
LTN1-206ENST00000486427 CCDC125Q86Z20 511 aa11.16□□□□□ -0.62
LTN1-206ENST00000486427 SNRPBP14678 240 aaKnown RBP11.15□□□□□ -0.62
LTN1-206ENST00000486427 HDGFL1Q5TGJ6 251 aa11.15□□□□□ -0.62
LTN1-206ENST00000486427 KDF1Q8NAX2 398 aaPredicted RBP11.15□□□□□ -0.62
LTN1-206ENST00000486427 TRIM47Q96LD4 638 aa11.15□□□□□ -0.62
LTN1-206ENST00000486427 CHIC2Q9UKJ5 165 aa11.15□□□□□ -0.62
LTN1-206ENST00000486427 C11orf95C9JLR9 678 aaPredicted RBP11.14□□□□□ -0.63
LTN1-206ENST00000486427 CC2D2BQ6DHV5 1058 aa11.14□□□□□ -0.63
LTN1-206ENST00000486427 TSEN34Q9BSV6 310 aaKnown RBP11.14□□□□□ -0.63
LTN1-206ENST00000486427 TRAK2O60296 914 aa11.13□□□□□ -0.63
LTN1-206ENST00000486427 ADH1AP07327 375 aa11.13□□□□□ -0.63
LTN1-206ENST00000486427 BMP2P12643 396 aa11.13□□□□□ -0.63
LTN1-206ENST00000486427 RELBQ01201 579 aa11.13□□□□□ -0.63
LTN1-206ENST00000486427 SCARF1Q14162 830 aa11.13□□□□□ -0.63
LTN1-206ENST00000486427 SENP2Q9HC62 589 aa11.13□□□□□ -0.63
LTN1-206ENST00000486427 UCN2Q96RP3 112 aa11.12□□□□□ -0.63
LTN1-206ENST00000486427 DOLKQ9UPQ8 538 aa11.12□□□□□ -0.63
LTN1-206ENST00000486427 UPP2O95045 317 aa11.11□□□□□ -0.63
LTN1-206ENST00000486427 PLPP7Q8NBV4 271 aa11.11□□□□□ -0.63
LTN1-206ENST00000486427 GLMNQ92990 594 aa11.11□□□□□ -0.63
LTN1-206ENST00000486427 OSBPL3Q9H4L5 887 aa11.11□□□□□ -0.63
LTN1-206ENST00000486427 KIFC2Q96AC6 838 aa11.1□□□□□ -0.63
LTN1-206ENST00000486427 ZMYND15Q9H091 742 aa11.1□□□□□ -0.63
LTN1-206ENST00000486427 ZNF395Q9H8N7 513 aaPredicted RBP11.1□□□□□ -0.63
LTN1-206ENST00000486427 SPINT1O43278 529 aa11.09□□□□□ -0.63
LTN1-206ENST00000486427 PTGIRP43119 386 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms