RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 LRRC9Q6ZRR7 1453 aa8.38□□□□□ -1.07
NHLRC3-205ENST00000485407 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.37□□□□□ -1.07
NHLRC3-205ENST00000485407 TOM1O60784 492 aa8.37□□□□□ -1.07
NHLRC3-205ENST00000485407 AP1G2O75843 785 aa8.37□□□□□ -1.07
NHLRC3-205ENST00000485407 HDGFL1Q5TGJ6 251 aa8.37□□□□□ -1.07
NHLRC3-205ENST00000485407 PADI6Q6TGC4 694 aa8.37□□□□□ -1.07
NHLRC3-205ENST00000485407 THSD4Q6ZMP0 1018 aa8.37□□□□□ -1.07
NHLRC3-205ENST00000485407 PLA2G2EQ9NZK7 142 aa8.37□□□□□ -1.07
NHLRC3-205ENST00000485407 ADGRG1Q9Y653 693 aa8.37□□□□□ -1.07
NHLRC3-205ENST00000485407 ARHGEF12Q9NZN5 1544 aa8.36□□□□□ -1.07
NHLRC3-205ENST00000485407 GPATCH8Q9UKJ3 1502 aaKnown RBP8.36□□□□□ -1.07
NHLRC3-205ENST00000485407 GOLGA8CPA6NN73 597 aa8.36□□□□□ -1.07
NHLRC3-205ENST00000485407 SPIRE2Q8WWL2 714 aa8.36□□□□□ -1.07
NHLRC3-205ENST00000485407 WNT2BQ93097 391 aa8.36□□□□□ -1.07
NHLRC3-205ENST00000485407 SUPT6HQ7KZ85 1726 aaKnown RBP8.36□□□□□ -1.07
NHLRC3-205ENST00000485407 SIGLEC1Q9BZZ2 1709 aa8.36□□□□□ -1.07
NHLRC3-205ENST00000485407 CDC42BPBQ9Y5S2 1711 aa8.36□□□□□ -1.07
NHLRC3-205ENST00000485407 PREX2Q70Z35 1606 aa8.36□□□□□ -1.07
NHLRC3-205ENST00000485407 CCNB3Q8WWL7 1395 aa8.35□□□□□ -1.07
NHLRC3-205ENST00000485407 CDC42BPAQ5VT25 1732 aa8.35□□□□□ -1.07
NHLRC3-205ENST00000485407 DENND4BO75064 1496 aaPredicted RBP8.35□□□□□ -1.07
NHLRC3-205ENST00000485407 PTPN5P54829 565 aa8.35□□□□□ -1.07
NHLRC3-205ENST00000485407 ARHGAP5Q13017 1502 aa8.34□□□□□ -1.07
NHLRC3-205ENST00000485407 NCOA2Q15596 1464 aa8.34□□□□□ -1.07
NHLRC3-205ENST00000485407 CCDC27Q2M243 656 aa8.34□□□□□ -1.07
NHLRC3-205ENST00000485407 KANK4Q5T7N3 995 aaPredicted RBP8.34□□□□□ -1.07
NHLRC3-205ENST00000485407 KIAA1468Q9P260 1216 aa8.34□□□□□ -1.07
NHLRC3-205ENST00000485407 CFDP1Q9UEE9 299 aaPredicted RBP8.34□□□□□ -1.07
NHLRC3-205ENST00000485407 KIAA1107Q9UPP5 1409 aa8.34□□□□□ -1.07
NHLRC3-205ENST00000485407 ITSN2Q9NZM3 1697 aa8.34□□□□□ -1.08
NHLRC3-205ENST00000485407 PLEKHH2Q8IVE3 1493 aa8.33□□□□□ -1.08
NHLRC3-205ENST00000485407 TRIM6-TRIM34B2RNG4 842 aa8.33□□□□□ -1.08
NHLRC3-205ENST00000485407 RSPH4AQ5TD94 716 aa8.33□□□□□ -1.08
NHLRC3-205ENST00000485407 NUTM1Q86Y26 1132 aa8.33□□□□□ -1.08
NHLRC3-205ENST00000485407 SCAPERQ9BY12 1400 aa8.33□□□□□ -1.08
NHLRC3-205ENST00000485407 IVNS1ABPQ9Y6Y0 642 aa8.33□□□□□ -1.08
NHLRC3-205ENST00000485407 MAGI2Q86UL8 1455 aa8.32□□□□□ -1.08
NHLRC3-205ENST00000485407 RICTORQ6R327 1708 aa8.32□□□□□ -1.08
NHLRC3-205ENST00000485407 CARNS1A5YM72 827 aa8.32□□□□□ -1.08
NHLRC3-205ENST00000485407 NUTM2BA6NNL0 878 aaPredicted RBP8.32□□□□□ -1.08
NHLRC3-205ENST00000485407 NUTM2EB1AL46 878 aaPredicted RBP8.32□□□□□ -1.08
NHLRC3-205ENST00000485407 SPTLC1O15269 473 aa8.32□□□□□ -1.08
NHLRC3-205ENST00000485407 TUSC1Q2TAM9 212 aa8.32□□□□□ -1.08
NHLRC3-205ENST00000485407 NUTM2DQ5VT03 806 aaPredicted RBP8.32□□□□□ -1.08
NHLRC3-205ENST00000485407 POTEAQ6S8J7 498 aa8.32□□□□□ -1.08
NHLRC3-205ENST00000485407 LAPTM4BQ86VI4 370 aa8.32□□□□□ -1.08
NHLRC3-205ENST00000485407 NUTM2AQ8IVF1 878 aaPredicted RBP8.32□□□□□ -1.08
NHLRC3-205ENST00000485407 RBM46Q8TBY0 533 aaKnown RBP8.32□□□□□ -1.08
NHLRC3-205ENST00000485407 ZFYVE16Q7Z3T8 1539 aa8.32□□□□□ -1.08
NHLRC3-205ENST00000485407 MIA2Q96PC5 1412 aa8.31□□□□□ -1.08
NHLRC3-205ENST00000485407 ZMYM4Q5VZL5 1548 aa8.31□□□□□ -1.08
NHLRC3-205ENST00000485407 CFAP70Q5T0N1 1121 aa8.31□□□□□ -1.08
NHLRC3-205ENST00000485407 RSBN1LQ6PCB5 846 aaPredicted RBP8.31□□□□□ -1.08
NHLRC3-205ENST00000485407 NDUFB9Q9Y6M9 179 aa8.31□□□□□ -1.08
NHLRC3-205ENST00000485407 ZNF518AQ6AHZ1 1483 aa8.31□□□□□ -1.08
NHLRC3-205ENST00000485407 USP17L8P0C7I0 530 aa8.3□□□□□ -1.08
NHLRC3-205ENST00000485407 QPCTQ16769 361 aa8.3□□□□□ -1.08
NHLRC3-205ENST00000485407 ANKK1Q8NFD2 765 aa8.3□□□□□ -1.08
NHLRC3-205ENST00000485407 AMOTL2Q9Y2J4 779 aa8.3□□□□□ -1.08
NHLRC3-205ENST00000485407 MYOM3Q5VTT5 1437 aa8.29□□□□□ -1.08
NHLRC3-205ENST00000485407 ABCC1P33527 1531 aa8.29□□□□□ -1.08
NHLRC3-205ENST00000485407 WASHC4Q2M389 1173 aa8.29□□□□□ -1.08
NHLRC3-205ENST00000485407 RTL5Q5HYW3 569 aaPredicted RBP8.29□□□□□ -1.08
NHLRC3-205ENST00000485407 ADAMTS19Q8TE59 1207 aa8.29□□□□□ -1.08
NHLRC3-205ENST00000485407 PPP1R12CQ9BZL4 782 aa8.29□□□□□ -1.08
NHLRC3-205ENST00000485407 SEPT9Q9UHD8 586 aaPredicted RBP8.29□□□□□ -1.08
NHLRC3-205ENST00000485407 CAMSAP1Q5T5Y3 1602 aa8.29□□□□□ -1.08
NHLRC3-205ENST00000485407 TRAPPC8Q9Y2L5 1435 aa8.29□□□□□ -1.08
NHLRC3-205ENST00000485407 KDM5CP41229 1560 aa8.28□□□□□ -1.08
NHLRC3-205ENST00000485407 SAMD9LQ8IVG5 1584 aa8.28□□□□□ -1.08
NHLRC3-205ENST00000485407 MLH3Q9UHC1 1453 aa8.28□□□□□ -1.08
NHLRC3-205ENST00000485407 MOXD2PA6NHM9 499 aa8.28□□□□□ -1.08
NHLRC3-205ENST00000485407 LILRB3O75022 631 aa8.28□□□□□ -1.08
NHLRC3-205ENST00000485407 SND1Q7KZF4 910 aaKnown RBP eCLIP8.28□□□□□ -1.08
NHLRC3-205ENST00000485407 ZFRQ96KR1 1074 aaKnown RBP8.28□□□□□ -1.08
NHLRC3-205ENST00000485407 TSKSQ9UJT2 592 aa8.28□□□□□ -1.08
NHLRC3-205ENST00000485407 NDUFV2P19404 249 aa8.27□□□□□ -1.09
NHLRC3-205ENST00000485407 LMOD1P29536 600 aaPredicted RBP8.27□□□□□ -1.09
NHLRC3-205ENST00000485407 AFAP1Q8N556 730 aa8.27□□□□□ -1.09
NHLRC3-205ENST00000485407 VRTNQ9H8Y1 702 aa8.27□□□□□ -1.09
NHLRC3-205ENST00000485407 PTPRKQ15262 1439 aa8.27□□□□□ -1.09
NHLRC3-205ENST00000485407 MBD5Q9P267 1494 aa8.26□□□□□ -1.09
NHLRC3-205ENST00000485407 SETD1AO15047 1707 aaKnown RBP8.26□□□□□ -1.09
NHLRC3-205ENST00000485407 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.26□□□□□ -1.09
NHLRC3-205ENST00000485407 SOWAHBA6NEL2 793 aa8.26□□□□□ -1.09
NHLRC3-205ENST00000485407 CD46P15529 392 aa8.26□□□□□ -1.09
NHLRC3-205ENST00000485407 BCAMP50895 628 aa8.26□□□□□ -1.09
NHLRC3-205ENST00000485407 HNRNPMP52272 730 aaKnown RBP eCLIP8.26□□□□□ -1.09
NHLRC3-205ENST00000485407 SRPK2P78362 688 aaKnown RBP8.26□□□□□ -1.09
NHLRC3-205ENST00000485407 FAM98CQ17RN3 349 aaKnown RBP8.26□□□□□ -1.09
NHLRC3-205ENST00000485407 SULF1Q8IWU6 871 aa8.26□□□□□ -1.09
NHLRC3-205ENST00000485407 TTC13Q8NBP0 860 aa8.26□□□□□ -1.09
NHLRC3-205ENST00000485407 CDCA7LQ96GN5 454 aa8.26□□□□□ -1.09
NHLRC3-205ENST00000485407 RBM27Q9P2N5 1060 aaKnown RBP8.26□□□□□ -1.09
NHLRC3-205ENST00000485407 PCDHB15Q9Y5E8 787 aa8.26□□□□□ -1.09
NHLRC3-205ENST00000485407 RTEL1-TNFRSF6BF6WH68 1400 aa8.26□□□□□ -1.09
NHLRC3-205ENST00000485407 ATP10AO60312 1499 aa8.26□□□□□ -1.09
NHLRC3-205ENST00000485407 SYCP2Q9BX26 1530 aa8.25□□□□□ -1.09
NHLRC3-205ENST00000485407 PALM3A6NDB9 673 aaPredicted RBP8.25□□□□□ -1.09
NHLRC3-205ENST00000485407 DDX11L8A8MPP1 907 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms