RNA–Protein interactions for RNA: ENST00000485402.5

TTC3-219, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,626 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-219ENST00000485402 MFAP1P55081 439 aaKnown RBP18.81■□□□□ 0.6
TTC3-219ENST00000485402 POLKQ9UBT6 870 aa18.81■□□□□ 0.6
TTC3-219ENST00000485402 RLBP1P12271 317 aa18.8■□□□□ 0.6
TTC3-219ENST00000485402 TBC1D2Q9BYX2 928 aa18.8■□□□□ 0.6
TTC3-219ENST00000485402 NAP1L5Q96NT1 182 aaPredicted RBP18.8■□□□□ 0.6
TTC3-219ENST00000485402 PDE3AQ14432 1141 aa18.8■□□□□ 0.6
TTC3-219ENST00000485402 TRMT2AQ8IZ69 625 aaKnown RBP18.8■□□□□ 0.6
TTC3-219ENST00000485402 PHF8Q9UPP1 1060 aa18.8■□□□□ 0.6
TTC3-219ENST00000485402 RGPD8O14715 1765 aaPredicted RBP18.79■□□□□ 0.6
TTC3-219ENST00000485402 USP6P35125 1406 aa18.79■□□□□ 0.6
TTC3-219ENST00000485402 ORAI2Q96SN7 254 aa18.78■□□□□ 0.6
TTC3-219ENST00000485402 XPCQ01831 940 aaPredicted RBP18.78■□□□□ 0.6
TTC3-219ENST00000485402 L1TD1Q5T7N2 865 aaKnown RBP18.78■□□□□ 0.6
TTC3-219ENST00000485402 DIAPH1O60610 1272 aaKnown RBP18.78■□□□□ 0.6
TTC3-219ENST00000485402 PANK2Q9BZ23 570 aa18.78■□□□□ 0.6
TTC3-219ENST00000485402 INSRP06213 1382 aa18.77■□□□□ 0.6
TTC3-219ENST00000485402 GOLGA6L3A6NEY3 463 aa18.76■□□□□ 0.59
TTC3-219ENST00000485402 NLRP6P59044 892 aa18.76■□□□□ 0.59
TTC3-219ENST00000485402 PSME1Q06323 249 aa18.76■□□□□ 0.59
TTC3-219ENST00000485402 FOXO3O43524 673 aa18.76■□□□□ 0.59
TTC3-219ENST00000485402 TCP11L2Q8N4U5 519 aa18.76■□□□□ 0.59
TTC3-219ENST00000485402 ITSN1Q15811 1721 aa18.76■□□□□ 0.59
TTC3-219ENST00000485402 ADGRL3Q9HAR2 1447 aa18.76■□□□□ 0.59
TTC3-219ENST00000485402 ABTB2Q8N961 1025 aa18.75■□□□□ 0.59
TTC3-219ENST00000485402 KIF20BQ96Q89 1820 aa18.75■□□□□ 0.59
TTC3-219ENST00000485402 LMOD2Q6P5Q4 547 aa18.75■□□□□ 0.59
TTC3-219ENST00000485402 FTSJ3Q8IY81 847 aaKnown RBP18.75■□□□□ 0.59
TTC3-219ENST00000485402 UBE2Q2Q8WVN8 375 aa18.75■□□□□ 0.59
TTC3-219ENST00000485402 C19orf44Q9H6X5 657 aa18.75■□□□□ 0.59
TTC3-219ENST00000485402 RARSP54136 660 aaKnown RBP18.74■□□□□ 0.59
TTC3-219ENST00000485402 LMTK3Q96Q04 1460 aa18.74■□□□□ 0.59
TTC3-219ENST00000485402 TMEM94Q12767 1356 aa18.74■□□□□ 0.59
TTC3-219ENST00000485402 ATF3P18847 181 aa18.74■□□□□ 0.59
TTC3-219ENST00000485402 NALCNQ8IZF0 1738 aa18.73■□□□□ 0.59
TTC3-219ENST00000485402 RUNDC1Q96C34 613 aa18.73■□□□□ 0.59
TTC3-219ENST00000485402 RWDD1Q9H446 243 aaPredicted RBP18.73■□□□□ 0.59
TTC3-219ENST00000485402 ANKARQ7Z5J8 1434 aa18.73■□□□□ 0.59
TTC3-219ENST00000485402 XRCC6P12956 609 aaKnown RBP eCLIP18.73■□□□□ 0.593e-6■■□□□ 14.4
TTC3-219ENST00000485402 TBC1D32Q96NH3 1257 aa18.72■□□□□ 0.59
TTC3-219ENST00000485402 HMOX1P09601 288 aa18.72■□□□□ 0.59
TTC3-219ENST00000485402 MON2Q7Z3U7 1717 aa18.72■□□□□ 0.59
TTC3-219ENST00000485402 AKAP12Q02952 1782 aa18.71■□□□□ 0.59
TTC3-219ENST00000485402 TTC21AQ8NDW8 1320 aa18.71■□□□□ 0.59
TTC3-219ENST00000485402 TOPAZ1Q8N9V7 1692 aa18.71■□□□□ 0.59
TTC3-219ENST00000485402 ANTXR1Q9H6X2 564 aa18.7■□□□□ 0.58
TTC3-219ENST00000485402 FOXD4L1Q9NU39 408 aa18.7■□□□□ 0.58
TTC3-219ENST00000485402 MAP2P11137 1827 aaKnown RBP18.69■□□□□ 0.58
TTC3-219ENST00000485402 ANKRD26Q9UPS8 1709 aa18.69■□□□□ 0.58
TTC3-219ENST00000485402 MCM4P33991 863 aa18.69■□□□□ 0.58
TTC3-219ENST00000485402 PNNQ9H307 717 aaKnown RBP18.69■□□□□ 0.58
TTC3-219ENST00000485402 ZNF335Q9H4Z2 1342 aaPredicted RBP18.69■□□□□ 0.58
TTC3-219ENST00000485402 ZBTB7CA1YPR0 619 aa18.69■□□□□ 0.58
TTC3-219ENST00000485402 C22orf23Q9BZE7 217 aa18.69■□□□□ 0.58
TTC3-219ENST00000485402 FMN2Q9NZ56 1722 aa18.69■□□□□ 0.58
TTC3-219ENST00000485402 TSR2Q969E8 191 aaKnown RBP18.68■□□□□ 0.58
TTC3-219ENST00000485402 TRAK2O60296 914 aa18.68■□□□□ 0.58
TTC3-219ENST00000485402 HSP90AB2PQ58FF8 381 aa18.67■□□□□ 0.58
TTC3-219ENST00000485402 ITPRIPQ8IWB1 547 aa18.67■□□□□ 0.58
TTC3-219ENST00000485402 DDX17Q92841 729 aaKnown RBP18.67■□□□□ 0.58
TTC3-219ENST00000485402 SHPRHQ149N8 1683 aa18.67■□□□□ 0.58
TTC3-219ENST00000485402 SSH2Q76I76 1423 aa18.66■□□□□ 0.58
TTC3-219ENST00000485402 AMPHP49418 695 aa18.66■□□□□ 0.58
TTC3-219ENST00000485402 PNPLA6Q8IY17 1366 aa18.66■□□□□ 0.58
TTC3-219ENST00000485402 AATKQ6ZMQ8 1374 aa18.66■□□□□ 0.58
TTC3-219ENST00000485402 PRKAR2BP31323 418 aa18.65■□□□□ 0.58
TTC3-219ENST00000485402 SMC4Q9NTJ3 1288 aa18.65■□□□□ 0.58
TTC3-219ENST00000485402 OVOS2A0A0J9YW53 1432 aa18.65■□□□□ 0.58
TTC3-219ENST00000485402 OVOS2Q6IE36 1432 aa18.65■□□□□ 0.58
TTC3-219ENST00000485402 HSP90AA1P07900 732 aaKnown RBP18.64■□□□□ 0.58
TTC3-219ENST00000485402 MAP3K19Q56UN5 1328 aa18.64■□□□□ 0.57
TTC3-219ENST00000485402 IL13P35225 146 aa18.63■□□□□ 0.57
TTC3-219ENST00000485402 HSCBQ8IWL3 235 aa18.63■□□□□ 0.57
TTC3-219ENST00000485402 NWD1Q149M9 1564 aa18.63■□□□□ 0.57
TTC3-219ENST00000485402 COL3A1P02461 1466 aaPredicted RBP18.63■□□□□ 0.57
TTC3-219ENST00000485402 CHMP5Q9NZZ3 219 aa18.63■□□□□ 0.57
TTC3-219ENST00000485402 KRT28Q7Z3Y7 464 aa18.63■□□□□ 0.57
TTC3-219ENST00000485402 CADPS2Q86UW7 1296 aa18.62■□□□□ 0.57
TTC3-219ENST00000485402 DZIP1LQ8IYY4 767 aaKnown RBP18.62■□□□□ 0.57
TTC3-219ENST00000485402 ZKSCAN2Q63HK3 967 aa18.62■□□□□ 0.57
TTC3-219ENST00000485402 LTV1Q96GA3 475 aaPredicted RBP18.62■□□□□ 0.57
TTC3-219ENST00000485402 EIF4A2Q14240 407 aaKnown RBP18.61■□□□□ 0.57
TTC3-219ENST00000485402 PLEKHF1Q96S99 279 aa18.61■□□□□ 0.57
TTC3-219ENST00000485402 MSH6P52701 1360 aa18.61■□□□□ 0.57
TTC3-219ENST00000485402 NRKQ7Z2Y5 1582 aa18.61■□□□□ 0.57
TTC3-219ENST00000485402 FCHSD2O94868 740 aa18.61■□□□□ 0.57
TTC3-219ENST00000485402 STRCP1A6NGW2 1772 aa18.61■□□□□ 0.57
TTC3-219ENST00000485402 MYH16Q9H6N6 1097 aa18.61■□□□□ 0.57
TTC3-219ENST00000485402 MVPQ14764 893 aaKnown RBP18.6■□□□□ 0.57
TTC3-219ENST00000485402 C1orf167Q5SNV9 1468 aa18.6■□□□□ 0.57
TTC3-219ENST00000485402 TMPOP42166 694 aaKnown RBP18.6■□□□□ 0.57
TTC3-219ENST00000485402 RIPK4P57078 832 aa18.6■□□□□ 0.57
TTC3-219ENST00000485402 STRCQ7RTU9 1775 aa18.6■□□□□ 0.57
TTC3-219ENST00000485402 PHACTR3Q96KR7 559 aa18.59■□□□□ 0.57
TTC3-219ENST00000485402 LNPKQ9C0E8 428 aa18.59■□□□□ 0.57
TTC3-219ENST00000485402 EXOSC9Q06265 439 aaKnown RBP18.59■□□□□ 0.57
TTC3-219ENST00000485402 SULT6B1Q6IMI4 303 aa18.59■□□□□ 0.57
TTC3-219ENST00000485402 USP31Q70CQ4 1352 aa18.59■□□□□ 0.57
TTC3-219ENST00000485402 AEBP1Q8IUX7 1158 aa18.59■□□□□ 0.57
TTC3-219ENST00000485402 NGEFQ8N5V2 710 aa18.58■□□□□ 0.57
TTC3-219ENST00000485402 CDK12Q9NYV4 1490 aaPredicted RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms