RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 ERVK-7P63135 1459 aa13.21□□□□□ -0.3
COL8A1-207ENST00000483969 ZC3H13Q5T200 1668 aaKnown RBP13.21□□□□□ -0.3
COL8A1-207ENST00000483969 SETD5Q9C0A6 1442 aa13.21□□□□□ -0.3
COL8A1-207ENST00000483969 DEPDC5O75140 1603 aa13.21□□□□□ -0.3
COL8A1-207ENST00000483969 NUTM2FA1L443 756 aa13.2□□□□□ -0.3
COL8A1-207ENST00000483969 ANKLE2Q86XL3 938 aa13.2□□□□□ -0.3
COL8A1-207ENST00000483969 ZNF516Q92618 1163 aa13.2□□□□□ -0.3
COL8A1-207ENST00000483969 ADGRG1Q9Y653 693 aa13.2□□□□□ -0.3
COL8A1-207ENST00000483969 A2ML1A8K2U0 1454 aa13.2□□□□□ -0.3
COL8A1-207ENST00000483969 RPRD2Q5VT52 1461 aaKnown RBP13.19□□□□□ -0.3
COL8A1-207ENST00000483969 HRCP23327 699 aa13.19□□□□□ -0.3
COL8A1-207ENST00000483969 Q6ZNB5 142 aa13.19□□□□□ -0.3
COL8A1-207ENST00000483969 GGCXP38435 758 aa13.18□□□□□ -0.3
COL8A1-207ENST00000483969 COPS2P61201 443 aa13.18□□□□□ -0.3
COL8A1-207ENST00000483969 PRKD2Q9BZL6 878 aa13.18□□□□□ -0.3
COL8A1-207ENST00000483969 TMEM134Q9H6X4 195 aa13.18□□□□□ -0.3
COL8A1-207ENST00000483969 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.18□□□□□ -0.3
COL8A1-207ENST00000483969 SPATA31D1Q6ZQQ2 1576 aa13.18□□□□□ -0.3
COL8A1-207ENST00000483969 PREX1Q8TCU6 1659 aa13.18□□□□□ -0.3
COL8A1-207ENST00000483969 SETD1BQ9UPS6 1966 aaKnown RBP13.18□□□□□ -0.3
COL8A1-207ENST00000483969 NOS1P29475 1434 aa13.17□□□□□ -0.3
COL8A1-207ENST00000483969 FCHSD2O94868 740 aa13.17□□□□□ -0.3
COL8A1-207ENST00000483969 V9GY48 417 aaPredicted RBP13.17□□□□□ -0.3
COL8A1-207ENST00000483969 UNC13BO14795 1591 aa13.16□□□□□ -0.3
COL8A1-207ENST00000483969 MPHOSPH9Q99550 1183 aa13.16□□□□□ -0.3
COL8A1-207ENST00000483969 EID1Q9Y6B2 187 aa13.16□□□□□ -0.3
COL8A1-207ENST00000483969 CAMSAP1Q5T5Y3 1602 aa13.16□□□□□ -0.3
COL8A1-207ENST00000483969 EFCAB6Q5THR3 1501 aa13.15□□□□□ -0.3
COL8A1-207ENST00000483969 PCDHB3Q9Y5E6 796 aa13.15□□□□□ -0.3
COL8A1-207ENST00000483969 SEMA3EO15041 775 aa13.14□□□□□ -0.31
COL8A1-207ENST00000483969 TXNDC2Q86VQ3 553 aa13.14□□□□□ -0.31
COL8A1-207ENST00000483969 PLA2R1Q13018 1463 aa13.14□□□□□ -0.31
COL8A1-207ENST00000483969 UGGT1Q9NYU2 1555 aa13.14□□□□□ -0.31
COL8A1-207ENST00000483969 CEP170BQ9Y4F5 1589 aaPredicted RBP13.14□□□□□ -0.31
COL8A1-207ENST00000483969 RAB3GAP2Q9H2M9 1393 aa13.13□□□□□ -0.31
COL8A1-207ENST00000483969 ZPR1O75312 459 aa13.13□□□□□ -0.31
COL8A1-207ENST00000483969 TRIM26Q12899 539 aaPredicted RBP13.13□□□□□ -0.31
COL8A1-207ENST00000483969 CEP152O94986 1710 aa13.13□□□□□ -0.31
COL8A1-207ENST00000483969 PTPRTO14522 1441 aa13.13□□□□□ -0.31
COL8A1-207ENST00000483969 RCCD1A6NED2 376 aa13.12□□□□□ -0.31
COL8A1-207ENST00000483969 KMT5BQ4FZB7 885 aa13.12□□□□□ -0.31
COL8A1-207ENST00000483969 NKX2-3Q8TAU0 364 aa13.12□□□□□ -0.31
COL8A1-207ENST00000483969 TMUB1Q9BVT8 246 aa13.12□□□□□ -0.31
COL8A1-207ENST00000483969 IQGAP3Q86VI3 1631 aa13.12□□□□□ -0.31
COL8A1-207ENST00000483969 MYO3AQ8NEV4 1616 aa13.11□□□□□ -0.31
COL8A1-207ENST00000483969 PLCB2Q00722 1185 aa13.11□□□□□ -0.31
COL8A1-207ENST00000483969 TET3O43151 1660 aa13.11□□□□□ -0.31
COL8A1-207ENST00000483969 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.1□□□□□ -0.31
COL8A1-207ENST00000483969 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.1□□□□□ -0.31
COL8A1-207ENST00000483969 TMEM2Q9UHN6 1383 aa13.09□□□□□ -0.31
COL8A1-207ENST00000483969 GCC2Q8IWJ2 1684 aa13.09□□□□□ -0.31
COL8A1-207ENST00000483969 GFRA3O60609 400 aa13.09□□□□□ -0.31
COL8A1-207ENST00000483969 LTKP29376 864 aa13.09□□□□□ -0.31
COL8A1-207ENST00000483969 HIC1Q14526 733 aa13.08□□□□□ -0.32
COL8A1-207ENST00000483969 BLOC1S3Q6QNY0 202 aa13.08□□□□□ -0.32
COL8A1-207ENST00000483969 NRG2O14511 850 aaPredicted RBP13.07□□□□□ -0.32
COL8A1-207ENST00000483969 ACTN4O43707 911 aaKnown RBP13.07□□□□□ -0.32
COL8A1-207ENST00000483969 PPP1R15AO75807 674 aaPredicted RBP13.07□□□□□ -0.32
COL8A1-207ENST00000483969 OATP04181 439 aa13.07□□□□□ -0.32
COL8A1-207ENST00000483969 CFHP08603 1231 aa13.07□□□□□ -0.32
COL8A1-207ENST00000483969 ZNF326Q5BKZ1 582 aaKnown RBP13.07□□□□□ -0.32
COL8A1-207ENST00000483969 SMYD5Q6GMV2 418 aa13.07□□□□□ -0.32
COL8A1-207ENST00000483969 BCANQ96GW7 911 aa13.07□□□□□ -0.32
COL8A1-207ENST00000483969 ZNF142P52746 1687 aaPredicted RBP13.06□□□□□ -0.32
COL8A1-207ENST00000483969 FAM161AQ3B820 660 aa13.06□□□□□ -0.32
COL8A1-207ENST00000483969 NPHP4O75161 1426 aaPredicted RBP13.05□□□□□ -0.32
COL8A1-207ENST00000483969 TESPA1A2RU30 521 aaPredicted RBP13.05□□□□□ -0.32
COL8A1-207ENST00000483969 SYNMO15061 1565 aa13.05□□□□□ -0.32
COL8A1-207ENST00000483969 ARHGAP23Q9P227 1491 aa13.04□□□□□ -0.32
COL8A1-207ENST00000483969 PXYLP1Q8TE99 480 aa13.04□□□□□ -0.32
COL8A1-207ENST00000483969 MED14O60244 1454 aa13.04□□□□□ -0.32
COL8A1-207ENST00000483969 SCAF11Q99590 1463 aaKnown RBP13.04□□□□□ -0.32
COL8A1-207ENST00000483969 SLIT1O75093 1534 aa13.03□□□□□ -0.32
COL8A1-207ENST00000483969 E9PCH4 1651 aa13.03□□□□□ -0.32
COL8A1-207ENST00000483969 RPGRIP1LQ68CZ1 1315 aa13.02□□□□□ -0.33
COL8A1-207ENST00000483969 RIMS2Q9UQ26 1411 aa13.02□□□□□ -0.33
COL8A1-207ENST00000483969 ADGRB3O60242 1522 aa13.01□□□□□ -0.33
COL8A1-207ENST00000483969 PIK3C2BO00750 1634 aa13.01□□□□□ -0.33
COL8A1-207ENST00000483969 STRCQ7RTU9 1775 aa13□□□□□ -0.33
COL8A1-207ENST00000483969 CCDC144AA2RUR9 1427 aa13□□□□□ -0.33
COL8A1-207ENST00000483969 ZNF335Q9H4Z2 1342 aaPredicted RBP13□□□□□ -0.33
COL8A1-207ENST00000483969 TLL1O43897 1013 aa13□□□□□ -0.33
COL8A1-207ENST00000483969 NUTM2DQ5VT03 806 aaPredicted RBP13□□□□□ -0.33
COL8A1-207ENST00000483969 METTL3Q86U44 580 aaKnown RBP13□□□□□ -0.33
COL8A1-207ENST00000483969 SLC26A8Q96RN1 970 aa13□□□□□ -0.33
COL8A1-207ENST00000483969 TRPM2O94759 1503 aa12.99□□□□□ -0.33
COL8A1-207ENST00000483969 SLC10A3P09131 477 aa12.99□□□□□ -0.33
COL8A1-207ENST00000483969 RGL3Q3MIN7 710 aa12.99□□□□□ -0.33
COL8A1-207ENST00000483969 TBX22Q9Y458 520 aa12.99□□□□□ -0.33
COL8A1-207ENST00000483969 UBR1Q8IWV7 1749 aa12.99□□□□□ -0.33
COL8A1-207ENST00000483969 PLEKHG1Q9ULL1 1385 aa12.98□□□□□ -0.33
COL8A1-207ENST00000483969 RNF223E7ERA6 249 aa12.98□□□□□ -0.33
COL8A1-207ENST00000483969 GNPATO15228 680 aa12.98□□□□□ -0.33
COL8A1-207ENST00000483969 NR1I2O75469 434 aa12.98□□□□□ -0.33
COL8A1-207ENST00000483969 RBM26Q5T8P6 1007 aaKnown RBP12.98□□□□□ -0.33
COL8A1-207ENST00000483969 TRAF7Q6Q0C0 670 aa12.98□□□□□ -0.33
COL8A1-207ENST00000483969 CFAP65Q6ZU64 1925 aaKnown RBP12.98□□□□□ -0.33
COL8A1-207ENST00000483969 ZFYVE9O95405 1425 aa12.97□□□□□ -0.33
COL8A1-207ENST00000483969 KDM5AP29375 1690 aaKnown RBP12.97□□□□□ -0.33
COL8A1-207ENST00000483969 PDZRN3Q9UPQ7 1066 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms