RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 TSR2Q969E8 191 aaKnown RBP14.31□□□□□ -0.12
SEC61A1-205ENST00000483956 ZKSCAN5Q9Y2L8 839 aa14.31□□□□□ -0.12
SEC61A1-205ENST00000483956 ABCC3O15438 1527 aa14.31□□□□□ -0.12
SEC61A1-205ENST00000483956 TMPOP42166 694 aaKnown RBP14.31□□□□□ -0.12
SEC61A1-205ENST00000483956 EXOSC9Q06265 439 aaKnown RBP14.31□□□□□ -0.12
SEC61A1-205ENST00000483956 TRIM35Q9UPQ4 493 aa14.31□□□□□ -0.12
SEC61A1-205ENST00000483956 ZBTB7CA1YPR0 619 aa14.31□□□□□ -0.12
SEC61A1-205ENST00000483956 CHGAP10645 457 aaKnown RBP14.31□□□□□ -0.12
SEC61A1-205ENST00000483956 RBM25P49756 843 aaKnown RBP14.31□□□□□ -0.12
SEC61A1-205ENST00000483956 ZNF710Q8N1W2 664 aa14.31□□□□□ -0.12
SEC61A1-205ENST00000483956 CFAP74Q9C0B2 1584 aa14.3□□□□□ -0.12
SEC61A1-205ENST00000483956 IGSF3O75054 1194 aa14.3□□□□□ -0.12
SEC61A1-205ENST00000483956 RAB3GAP1Q15042 981 aa14.3□□□□□ -0.12
SEC61A1-205ENST00000483956 ITPRIPQ8IWB1 547 aa14.3□□□□□ -0.12
SEC61A1-205ENST00000483956 SNX21Q969T3 373 aa14.3□□□□□ -0.12
SEC61A1-205ENST00000483956 ZBTB40Q9NUA8 1239 aa14.3□□□□□ -0.12
SEC61A1-205ENST00000483956 KIF16BQ96L93 1317 aa14.3□□□□□ -0.12
SEC61A1-205ENST00000483956 MLH3Q9UHC1 1453 aa14.29□□□□□ -0.12
SEC61A1-205ENST00000483956 CGNQ9P2M7 1197 aaKnown RBP14.29□□□□□ -0.12
SEC61A1-205ENST00000483956 CFAP65Q6ZU64 1925 aaKnown RBP14.29□□□□□ -0.12
SEC61A1-205ENST00000483956 A0A1W2PP64 1363 aa14.29□□□□□ -0.12
SEC61A1-205ENST00000483956 PDLIM2Q96JY6 352 aa14.28□□□□□ -0.12
SEC61A1-205ENST00000483956 SIGLEC1Q9BZZ2 1709 aa14.28□□□□□ -0.12
SEC61A1-205ENST00000483956 CDC42BPGQ6DT37 1551 aa14.28□□□□□ -0.12
SEC61A1-205ENST00000483956 ASXL2Q76L83 1435 aa14.28□□□□□ -0.12
SEC61A1-205ENST00000483956 CLTCQ00610 1675 aaKnown RBP14.28□□□□□ -0.12
SEC61A1-205ENST00000483956 POGZQ7Z3K3 1410 aa14.28□□□□□ -0.12
SEC61A1-205ENST00000483956 NUCB1Q02818 461 aa14.28□□□□□ -0.12
SEC61A1-205ENST00000483956 CIZ1Q9ULV3 898 aaPredicted RBP14.27□□□□□ -0.12
SEC61A1-205ENST00000483956 NOB1Q9ULX3 412 aaKnown RBP14.27□□□□□ -0.12
SEC61A1-205ENST00000483956 DDX49Q9Y6V7 483 aaKnown RBP14.27□□□□□ -0.12
SEC61A1-205ENST00000483956 IPO8O15397 1037 aaKnown RBP14.27□□□□□ -0.13
SEC61A1-205ENST00000483956 MAPK8IP2Q13387 824 aaPredicted RBP14.27□□□□□ -0.13
SEC61A1-205ENST00000483956 TMEM57Q8N5G2 664 aa14.27□□□□□ -0.13
SEC61A1-205ENST00000483956 FOXD4L1Q9NU39 408 aa14.27□□□□□ -0.13
SEC61A1-205ENST00000483956 ZFYVE9O95405 1425 aa14.27□□□□□ -0.13
SEC61A1-205ENST00000483956 PTMSP20962 102 aa14.26□□□□□ -0.13
SEC61A1-205ENST00000483956 ALDH1L2Q3SY69 923 aa14.26□□□□□ -0.13
SEC61A1-205ENST00000483956 MYRIPQ8NFW9 859 aa14.26□□□□□ -0.13
SEC61A1-205ENST00000483956 RBSNQ9H1K0 784 aa14.26□□□□□ -0.13
SEC61A1-205ENST00000483956 SPDYE4A6NLX3 237 aa14.26□□□□□ -0.13
SEC61A1-205ENST00000483956 VGFO15240 615 aaPredicted RBP14.26□□□□□ -0.13
SEC61A1-205ENST00000483956 PPIP5K1Q6PFW1 1433 aa14.26□□□□□ -0.13
SEC61A1-205ENST00000483956 CDK11BP21127 795 aaKnown RBP14.25□□□□□ -0.13
SEC61A1-205ENST00000483956 BRPF1P55201 1214 aaPredicted RBP14.25□□□□□ -0.13
SEC61A1-205ENST00000483956 IBTKQ9P2D0 1353 aaPredicted RBP14.25□□□□□ -0.13
SEC61A1-205ENST00000483956 REREQ9P2R6 1566 aa14.25□□□□□ -0.13
SEC61A1-205ENST00000483956 FAM177BA6PVY3 158 aa14.25□□□□□ -0.13
SEC61A1-205ENST00000483956 PNPLA6Q8IY17 1366 aa14.25□□□□□ -0.13
SEC61A1-205ENST00000483956 HSP90AB1P08238 724 aaKnown RBP14.25□□□□□ -0.13
SEC61A1-205ENST00000483956 KLHL40Q2TBA0 621 aa14.25□□□□□ -0.13
SEC61A1-205ENST00000483956 CABP2Q9NPB3 220 aa14.25□□□□□ -0.13
SEC61A1-205ENST00000483956 ZNF428Q96B54 188 aa14.24□□□□□ -0.13
SEC61A1-205ENST00000483956 ATAD2Q6PL18 1390 aa14.24□□□□□ -0.13
SEC61A1-205ENST00000483956 U2SURPO15042 1029 aaKnown RBP14.24□□□□□ -0.13
SEC61A1-205ENST00000483956 BMP2KLQ5H9B9 411 aa14.24□□□□□ -0.13
SEC61A1-205ENST00000483956 TAF3Q5VWG9 929 aa14.24□□□□□ -0.13
SEC61A1-205ENST00000483956 CD163L1Q9NR16 1453 aa14.23□□□□□ -0.13
SEC61A1-205ENST00000483956 SSFA2P28290 1259 aa14.23□□□□□ -0.13
SEC61A1-205ENST00000483956 MCM5P33992 734 aa14.23□□□□□ -0.13
SEC61A1-205ENST00000483956 DNTTIP2Q5QJE6 756 aaKnown RBP14.23□□□□□ -0.13
SEC61A1-205ENST00000483956 KIF20BQ96Q89 1820 aa14.23□□□□□ -0.13
SEC61A1-205ENST00000483956 ZNF445P59923 1031 aa14.23□□□□□ -0.13
SEC61A1-205ENST00000483956 CHD1LQ86WJ1 897 aa14.23□□□□□ -0.13
SEC61A1-205ENST00000483956 PIK3R4Q99570 1358 aa14.22□□□□□ -0.13
SEC61A1-205ENST00000483956 PTPRMP28827 1452 aa14.22□□□□□ -0.13
SEC61A1-205ENST00000483956 ARHGAP31Q2M1Z3 1444 aa14.22□□□□□ -0.13
SEC61A1-205ENST00000483956 CAVIN1Q6NZI2 390 aaKnown RBP14.22□□□□□ -0.13
SEC61A1-205ENST00000483956 LRRC7Q96NW7 1537 aa14.22□□□□□ -0.13
SEC61A1-205ENST00000483956 GOLGA6L22H0YM25 854 aa14.21□□□□□ -0.13
SEC61A1-205ENST00000483956 ZSCAN23Q3MJ62 389 aa14.21□□□□□ -0.13
SEC61A1-205ENST00000483956 PTCH1Q13635 1447 aa14.21□□□□□ -0.14
SEC61A1-205ENST00000483956 FYB1O15117 783 aa14.2□□□□□ -0.14
SEC61A1-205ENST00000483956 PRIM1P49642 420 aaKnown RBP14.2□□□□□ -0.14
SEC61A1-205ENST00000483956 GGNBP2Q9H3C7 697 aa14.2□□□□□ -0.14
SEC61A1-205ENST00000483956 TERF2IPQ9NYB0 399 aa14.2□□□□□ -0.14
SEC61A1-205ENST00000483956 GCC1Q96CN9 775 aa14.2□□□□□ -0.14
SEC61A1-205ENST00000483956 CCDC39Q9UFE4 941 aa14.2□□□□□ -0.14
SEC61A1-205ENST00000483956 DIAPH1O60610 1272 aaKnown RBP14.2□□□□□ -0.14
SEC61A1-205ENST00000483956 GGT6Q6P531 493 aa14.2□□□□□ -0.14
SEC61A1-205ENST00000483956 LNPKQ9C0E8 428 aa14.2□□□□□ -0.14
SEC61A1-205ENST00000483956 FAM135BQ49AJ0 1406 aa14.19□□□□□ -0.14
SEC61A1-205ENST00000483956 IRX5P78411 483 aaPredicted RBP14.19□□□□□ -0.14
SEC61A1-205ENST00000483956 ZNF771Q7L3S4 317 aaPredicted RBP14.19□□□□□ -0.14
SEC61A1-205ENST00000483956 KIF2CQ99661 725 aa14.19□□□□□ -0.14
SEC61A1-205ENST00000483956 ARHGAP45Q92619 1136 aa14.19□□□□□ -0.14
SEC61A1-205ENST00000483956 FCHSD2O94868 740 aa14.18□□□□□ -0.14
SEC61A1-205ENST00000483956 BAG4O95429 457 aaKnown RBP14.18□□□□□ -0.14
SEC61A1-205ENST00000483956 SRPK2P78362 688 aaKnown RBP14.18□□□□□ -0.14
SEC61A1-205ENST00000483956 KIAA2012Q0VF49 1180 aa14.17□□□□□ -0.14
SEC61A1-205ENST00000483956 CD2BP2O95400 341 aaKnown RBP14.17□□□□□ -0.14
SEC61A1-205ENST00000483956 ZFP91Q96JP5 570 aaPredicted RBP14.17□□□□□ -0.14
SEC61A1-205ENST00000483956 CHMP4AQ9BY43 222 aa14.17□□□□□ -0.14
SEC61A1-205ENST00000483956 ZBTB7BO15156 539 aaPredicted RBP14.17□□□□□ -0.14
SEC61A1-205ENST00000483956 U2AF2P26368 475 aaKnown RBP eCLIP14.16□□□□□ -0.14
SEC61A1-205ENST00000483956 GTF2F1P35269 517 aaKnown RBP eCLIP14.16□□□□□ -0.14
SEC61A1-205ENST00000483956 CLEC17AQ6ZS10 378 aa14.16□□□□□ -0.14
SEC61A1-205ENST00000483956 PDCL2Q8N4E4 241 aa14.16□□□□□ -0.14
SEC61A1-205ENST00000483956 PRIMPOLQ96LW4 560 aa14.16□□□□□ -0.14
SEC61A1-205ENST00000483956 BCL2L12Q9HB09 334 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms