RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 R3HDM1Q15032 1099 aaKnown RBP18.82■□□□□ 0.6
SMAD9-204ENST00000483941 USP6P35125 1406 aa18.82■□□□□ 0.6
SMAD9-204ENST00000483941 MRS2Q9HD23 443 aa18.81■□□□□ 0.6
SMAD9-204ENST00000483941 BTG4Q9NY30 223 aa18.81■□□□□ 0.6
SMAD9-204ENST00000483941 TTC21BQ7Z4L5 1316 aa18.8■□□□□ 0.6
SMAD9-204ENST00000483941 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.8■□□□□ 0.6
SMAD9-204ENST00000483941 COG3Q96JB2 828 aa18.8■□□□□ 0.6
SMAD9-204ENST00000483941 RREB1Q92766 1687 aa18.79■□□□□ 0.6
SMAD9-204ENST00000483941 FAM182BQ5T319 152 aa18.79■□□□□ 0.6
SMAD9-204ENST00000483941 PPP2R1AP30153 589 aa18.78■□□□□ 0.6
SMAD9-204ENST00000483941 AKAP12Q02952 1782 aa18.78■□□□□ 0.6
SMAD9-204ENST00000483941 SPATA31A5Q5VU36 1347 aa18.77■□□□□ 0.6
SMAD9-204ENST00000483941 SPATA31A7Q8IWB4 1347 aa18.77■□□□□ 0.6
SMAD9-204ENST00000483941 GGNBP2Q9H3C7 697 aa18.77■□□□□ 0.6
SMAD9-204ENST00000483941 NUP188Q5SRE5 1749 aa18.77■□□□□ 0.59
SMAD9-204ENST00000483941 MON2Q7Z3U7 1717 aa18.77■□□□□ 0.59
SMAD9-204ENST00000483941 SSH2Q76I76 1423 aa18.75■□□□□ 0.59
SMAD9-204ENST00000483941 CFAP53Q96M91 514 aa18.75■□□□□ 0.59
SMAD9-204ENST00000483941 PHRF1Q9P1Y6 1649 aaKnown RBP18.74■□□□□ 0.59
SMAD9-204ENST00000483941 EZH2Q15910 746 aaKnown RBP18.74■□□□□ 0.59
SMAD9-204ENST00000483941 PAK3O75914 559 aaPredicted RBP18.73■□□□□ 0.59
SMAD9-204ENST00000483941 NME9Q86XW9 330 aa18.73■□□□□ 0.59
SMAD9-204ENST00000483941 USP31Q70CQ4 1352 aa18.72■□□□□ 0.59
SMAD9-204ENST00000483941 ABTB2Q8N961 1025 aa18.72■□□□□ 0.59
SMAD9-204ENST00000483941 AATKQ6ZMQ8 1374 aa18.7■□□□□ 0.58
SMAD9-204ENST00000483941 TNNT2P45379 298 aaPredicted RBP18.7■□□□□ 0.58
SMAD9-204ENST00000483941 CAMKK2Q96RR4 588 aa18.7■□□□□ 0.58
SMAD9-204ENST00000483941 PRDM11Q9NQV5 511 aa18.7■□□□□ 0.58
SMAD9-204ENST00000483941 KIF20BQ96Q89 1820 aa18.7■□□□□ 0.58
SMAD9-204ENST00000483941 TRIM37O94972 964 aa18.69■□□□□ 0.58
SMAD9-204ENST00000483941 YY1P25490 414 aa18.69■□□□□ 0.58
SMAD9-204ENST00000483941 NLRP6P59044 892 aa18.69■□□□□ 0.58
SMAD9-204ENST00000483941 NRKQ7Z2Y5 1582 aa18.68■□□□□ 0.58
SMAD9-204ENST00000483941 FAM196AQ6ZSG2 479 aa18.68■□□□□ 0.58
SMAD9-204ENST00000483941 ANKRD26Q9UPS8 1709 aa18.68■□□□□ 0.58
SMAD9-204ENST00000483941 SPATA31A1Q5TZJ5 1347 aa18.68■□□□□ 0.58
SMAD9-204ENST00000483941 MTHFSP49914 203 aa18.67■□□□□ 0.58
SMAD9-204ENST00000483941 KCNH5Q8NCM2 988 aa18.67■□□□□ 0.58
SMAD9-204ENST00000483941 PNISRQ8TF01 805 aaKnown RBP18.67■□□□□ 0.58
SMAD9-204ENST00000483941 OVOS2A0A0J9YW53 1432 aa18.66■□□□□ 0.58
SMAD9-204ENST00000483941 OVOS2Q6IE36 1432 aa18.66■□□□□ 0.58
SMAD9-204ENST00000483941 WDR43Q15061 677 aaKnown RBP eCLIP18.66■□□□□ 0.58
SMAD9-204ENST00000483941 KIAA0232Q92628 1395 aa18.66■□□□□ 0.58
SMAD9-204ENST00000483941 APBA3O96018 575 aa18.65■□□□□ 0.58
SMAD9-204ENST00000483941 FAM9BQ8IZU0 186 aa18.65■□□□□ 0.58
SMAD9-204ENST00000483941 NUDCQ9Y266 331 aa18.65■□□□□ 0.58
SMAD9-204ENST00000483941 INSRP06213 1382 aa18.65■□□□□ 0.58
SMAD9-204ENST00000483941 CCDC184Q52MB2 194 aa18.64■□□□□ 0.57
SMAD9-204ENST00000483941 STRN4Q9NRL3 753 aa18.63■□□□□ 0.57
SMAD9-204ENST00000483941 KIF24Q5T7B8 1368 aa18.62■□□□□ 0.57
SMAD9-204ENST00000483941 RGPD3A6NKT7 1758 aaPredicted RBP18.62■□□□□ 0.57
SMAD9-204ENST00000483941 RGPD4Q7Z3J3 1758 aa18.62■□□□□ 0.57
SMAD9-204ENST00000483941 CHRNA2Q15822 529 aa18.61■□□□□ 0.57
SMAD9-204ENST00000483941 POLKQ9UBT6 870 aa18.61■□□□□ 0.57
SMAD9-204ENST00000483941 PARP4Q9UKK3 1724 aaKnown RBP18.6■□□□□ 0.57
SMAD9-204ENST00000483941 LMO7Q8WWI1 1683 aa18.6■□□□□ 0.57
SMAD9-204ENST00000483941 NBPF14Q5TI25 921 aa18.6■□□□□ 0.57
SMAD9-204ENST00000483941 CAMTA1Q9Y6Y1 1673 aa18.6■□□□□ 0.57
SMAD9-204ENST00000483941 PNNQ9H307 717 aaKnown RBP18.59■□□□□ 0.57
SMAD9-204ENST00000483941 USP35Q9P2H5 1018 aa18.59■□□□□ 0.57
SMAD9-204ENST00000483941 PPP1R1BQ9UD71 204 aaPredicted RBP18.59■□□□□ 0.57
SMAD9-204ENST00000483941 SMG6Q86US8 1419 aaKnown RBP18.58■□□□□ 0.57
SMAD9-204ENST00000483941 PPM1GO15355 546 aaPredicted RBP18.58■□□□□ 0.56
SMAD9-204ENST00000483941 DIAPH1O60610 1272 aaKnown RBP18.58■□□□□ 0.56
SMAD9-204ENST00000483941 PDE3BQ13370 1112 aa18.58■□□□□ 0.56
SMAD9-204ENST00000483941 BARGINQ6ZT62 677 aa18.58■□□□□ 0.56
SMAD9-204ENST00000483941 YTHDC1Q96MU7 727 aaKnown RBP18.58■□□□□ 0.56
SMAD9-204ENST00000483941 PIK3C2AO00443 1686 aa18.57■□□□□ 0.56
SMAD9-204ENST00000483941 USP54Q70EL1 1684 aa18.57■□□□□ 0.56
SMAD9-204ENST00000483941 SPON1Q9HCB6 807 aa18.57■□□□□ 0.56
SMAD9-204ENST00000483941 UTRNP46939 3433 aa18.57■□□□□ 0.56
SMAD9-204ENST00000483941 CASZ1Q86V15 1759 aa18.56■□□□□ 0.56
SMAD9-204ENST00000483941 DCAF8L1A6NGE4 600 aa18.56■□□□□ 0.56
SMAD9-204ENST00000483941 AMPHP49418 695 aa18.56■□□□□ 0.56
SMAD9-204ENST00000483941 ZC3H6P61129 1189 aaKnown RBP18.56■□□□□ 0.56
SMAD9-204ENST00000483941 NUTM2GQ5VZR2 741 aa18.56■□□□□ 0.56
SMAD9-204ENST00000483941 SBF2Q86WG5 1849 aa18.56■□□□□ 0.56
SMAD9-204ENST00000483941 USP19O94966 1318 aa18.55■□□□□ 0.56
SMAD9-204ENST00000483941 CENPBP07199 599 aaPredicted RBP18.55■□□□□ 0.56
SMAD9-204ENST00000483941 PEAK1Q9H792 1746 aa18.54■□□□□ 0.56
SMAD9-204ENST00000483941 KCNQ2O43526 872 aa18.54■□□□□ 0.56
SMAD9-204ENST00000483941 GCP02774 474 aa18.54■□□□□ 0.56
SMAD9-204ENST00000483941 EVA1CP58658 441 aa18.54■□□□□ 0.56
SMAD9-204ENST00000483941 RRS1Q15050 365 aaKnown RBP18.54■□□□□ 0.56
SMAD9-204ENST00000483941 RTL1A6NKG5 1358 aa18.54■□□□□ 0.56
SMAD9-204ENST00000483941 FLT4P35916 1363 aa18.54■□□□□ 0.56
SMAD9-204ENST00000483941 NGEFQ8N5V2 710 aa18.53■□□□□ 0.56
SMAD9-204ENST00000483941 EMILIN1Q9Y6C2 1016 aa18.53■□□□□ 0.56
SMAD9-204ENST00000483941 LRRC37A3O60309 1634 aa18.52■□□□□ 0.56
SMAD9-204ENST00000483941 MAP3K19Q56UN5 1328 aa18.52■□□□□ 0.56
SMAD9-204ENST00000483941 SOX12O15370 315 aa18.52■□□□□ 0.56
SMAD9-204ENST00000483941 HNRNPUQ00839 825 aaKnown RBP eCLIP18.52■□□□□ 0.56
SMAD9-204ENST00000483941 LARP1Q6PKG0 1096 aaKnown RBP18.52■□□□□ 0.56
SMAD9-204ENST00000483941 TCP11L2Q8N4U5 519 aa18.52■□□□□ 0.56
SMAD9-204ENST00000483941 ADAMTS8Q9UP79 889 aa18.52■□□□□ 0.56
SMAD9-204ENST00000483941 WNK3Q9BYP7 1800 aa18.51■□□□□ 0.55
SMAD9-204ENST00000483941 NEFMP07197 916 aa18.51■□□□□ 0.55
SMAD9-204ENST00000483941 CPDO75976 1380 aa18.51■□□□□ 0.55
SMAD9-204ENST00000483941 OVOS2A0A0G2JMS6 1433 aa18.5■□□□□ 0.55
SMAD9-204ENST00000483941 SLIT3O75094 1523 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms