RNA–Protein interactions for RNA: ENST00000483821.1

RXRB-205, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-205ENST00000483821 IQSEC2Q5JU85 1478 aa17.56■□□□□ 0.4
RXRB-205ENST00000483821 TRPM3Q9HCF6 1732 aaPredicted RBP17.55■□□□□ 0.4
RXRB-205ENST00000483821 SLFN5Q08AF3 891 aa17.55■□□□□ 0.4
RXRB-205ENST00000483821 NEUROD2Q15784 382 aa17.55■□□□□ 0.4
RXRB-205ENST00000483821 SUPT16HQ9Y5B9 1047 aaKnown RBP17.55■□□□□ 0.4
RXRB-205ENST00000483821 TNS3Q68CZ2 1445 aa17.55■□□□□ 0.4
RXRB-205ENST00000483821 SPATA31A3Q5VYP0 1347 aa17.54■□□□□ 0.4
RXRB-205ENST00000483821 SLIT3O75094 1523 aa17.54■□□□□ 0.4
RXRB-205ENST00000483821 HMOX1P09601 288 aa17.54■□□□□ 0.4
RXRB-205ENST00000483821 CALD1Q05682 793 aaKnown RBP17.54■□□□□ 0.4
RXRB-205ENST00000483821 LMOD3Q0VAK6 560 aa17.54■□□□□ 0.4
RXRB-205ENST00000483821 CDCA7LQ96GN5 454 aa17.54■□□□□ 0.4
RXRB-205ENST00000483821 SOS2Q07890 1332 aaPredicted RBP17.53■□□□□ 0.4
RXRB-205ENST00000483821 PXDNQ92626 1479 aa17.53■□□□□ 0.4
RXRB-205ENST00000483821 RIPK4P57078 832 aa17.53■□□□□ 0.4
RXRB-205ENST00000483821 SULT6B1Q6IMI4 303 aa17.53■□□□□ 0.4
RXRB-205ENST00000483821 AEBP2Q6ZN18 517 aaPredicted RBP17.53■□□□□ 0.4
RXRB-205ENST00000483821 ARHGEF25Q86VW2 580 aa17.53■□□□□ 0.4
RXRB-205ENST00000483821 RRP7AQ9Y3A4 280 aaKnown RBP17.53■□□□□ 0.4
RXRB-205ENST00000483821 NFAT5O94916 1531 aa17.52■□□□□ 0.4
RXRB-205ENST00000483821 NFE2L2Q16236 605 aa17.52■□□□□ 0.4
RXRB-205ENST00000483821 MYH16Q9H6N6 1097 aa17.52■□□□□ 0.4
RXRB-205ENST00000483821 MARF1Q9Y4F3 1742 aaKnown RBP17.52■□□□□ 0.39
RXRB-205ENST00000483821 TRMT2AQ8IZ69 625 aaKnown RBP17.51■□□□□ 0.39
RXRB-205ENST00000483821 PEAK1Q9H792 1746 aa17.51■□□□□ 0.39
RXRB-205ENST00000483821 RCAN3Q9UKA8 241 aa17.51■□□□□ 0.39
RXRB-205ENST00000483821 IL16Q14005 1332 aa17.5■□□□□ 0.39
RXRB-205ENST00000483821 DDX17Q92841 729 aaKnown RBP17.5■□□□□ 0.39
RXRB-205ENST00000483821 ALS2Q96Q42 1657 aa17.5■□□□□ 0.39
RXRB-205ENST00000483821 IGSF1Q8N6C5 1336 aa17.49■□□□□ 0.39
RXRB-205ENST00000483821 DUSP27Q5VZP5 1158 aa17.49■□□□□ 0.39
RXRB-205ENST00000483821 ERICH6BQ5W0A0 696 aa17.49■□□□□ 0.39
RXRB-205ENST00000483821 EYA1Q99502 592 aa17.49■□□□□ 0.39
RXRB-205ENST00000483821 LTBP4Q8N2S1 1624 aa17.49■□□□□ 0.39
RXRB-205ENST00000483821 ZBTB7CA1YPR0 619 aa17.48■□□□□ 0.39
RXRB-205ENST00000483821 PHRF1Q9P1Y6 1649 aaKnown RBP17.47■□□□□ 0.39
RXRB-205ENST00000483821 PHACTR3Q96KR7 559 aa17.47■□□□□ 0.39
RXRB-205ENST00000483821 KDRP35968 1356 aa17.47■□□□□ 0.39
RXRB-205ENST00000483821 FKBP8Q14318 412 aa17.46■□□□□ 0.39
RXRB-205ENST00000483821 LTV1Q96GA3 475 aaPredicted RBP17.46■□□□□ 0.39
RXRB-205ENST00000483821 TRIM35Q9UPQ4 493 aa17.46■□□□□ 0.39
RXRB-205ENST00000483821 TOM1O60784 492 aa17.45■□□□□ 0.38
RXRB-205ENST00000483821 AEBP1Q8IUX7 1158 aa17.45■□□□□ 0.38
RXRB-205ENST00000483821 RNF123Q5XPI4 1314 aa17.45■□□□□ 0.38
RXRB-205ENST00000483821 HAP1P54257 671 aaPredicted RBP17.44■□□□□ 0.38
RXRB-205ENST00000483821 ZC3H6P61129 1189 aaKnown RBP17.44■□□□□ 0.38
RXRB-205ENST00000483821 GAS2L2Q8NHY3 880 aa17.44■□□□□ 0.38
RXRB-205ENST00000483821 LRRC59Q96AG4 307 aaKnown RBP17.44■□□□□ 0.38
RXRB-205ENST00000483821 MED1Q15648 1581 aaPredicted RBP17.44■□□□□ 0.38
RXRB-205ENST00000483821 RGPD1P0DJD0 1748 aa17.44■□□□□ 0.38
RXRB-205ENST00000483821 LTN1O94822 1766 aa17.43■□□□□ 0.38
RXRB-205ENST00000483821 CPDO75976 1380 aa17.43■□□□□ 0.38
RXRB-205ENST00000483821 PLEKHG5O94827 1062 aa17.43■□□□□ 0.38
RXRB-205ENST00000483821 CT47B1P0C2W7 299 aaPredicted RBP17.43■□□□□ 0.38
RXRB-205ENST00000483821 ABCC6O95255 1503 aa17.42■□□□□ 0.38
RXRB-205ENST00000483821 HTATSF1O43719 755 aaKnown RBP17.42■□□□□ 0.38
RXRB-205ENST00000483821 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.42■□□□□ 0.38
RXRB-205ENST00000483821 ANKRD24Q8TF21 1146 aa17.42■□□□□ 0.38
RXRB-205ENST00000483821 SPINK5Q9NQ38 1064 aaPredicted RBP17.41■□□□□ 0.38
RXRB-205ENST00000483821 NHSL1Q5SYE7 1610 aa17.4■□□□□ 0.38
RXRB-205ENST00000483821 GNAI1P63096 354 aa17.4■□□□□ 0.38
RXRB-205ENST00000483821 CABLES1Q8TDN4 633 aa17.4■□□□□ 0.38
RXRB-205ENST00000483821 RTF1Q92541 710 aaKnown RBP17.4■□□□□ 0.38
RXRB-205ENST00000483821 NBPF6Q5VWK0 638 aa17.39■□□□□ 0.37
RXRB-205ENST00000483821 NBPF4Q96M43 638 aa17.39■□□□□ 0.37
RXRB-205ENST00000483821 IFT57Q9NWB7 429 aa17.39■□□□□ 0.37
RXRB-205ENST00000483821 RRP1P56182 461 aaKnown RBP17.38■□□□□ 0.37
RXRB-205ENST00000483821 AMOTQ4VCS5 1084 aa17.38■□□□□ 0.37
RXRB-205ENST00000483821 PLEKHO1Q53GL0 409 aaPredicted RBP17.37■□□□□ 0.37
RXRB-205ENST00000483821 PRDM11Q9NQV5 511 aa17.37■□□□□ 0.37
RXRB-205ENST00000483821 AHDC1Q5TGY3 1603 aaPredicted RBP17.36■□□□□ 0.37
RXRB-205ENST00000483821 CSB-PGBD3P0DP91 1061 aa17.36■□□□□ 0.37
RXRB-205ENST00000483821 MTHFSDQ2M296 383 aaKnown RBP17.36■□□□□ 0.37
RXRB-205ENST00000483821 AXIN2Q9Y2T1 843 aa17.36■□□□□ 0.37
RXRB-205ENST00000483821 ERBB3P21860 1342 aa17.36■□□□□ 0.37
RXRB-205ENST00000483821 KIAA0232Q92628 1395 aa17.36■□□□□ 0.37
RXRB-205ENST00000483821 CFAP44Q96MT7 982 aa17.35■□□□□ 0.37
RXRB-205ENST00000483821 FANCIQ9NVI1 1328 aa17.35■□□□□ 0.37
RXRB-205ENST00000483821 PLEKHG2Q9H7P9 1386 aa17.35■□□□□ 0.37
RXRB-205ENST00000483821 GNAT3A8MTJ3 354 aa17.34■□□□□ 0.37
RXRB-205ENST00000483821 NCAPD2Q15021 1401 aa17.34■□□□□ 0.37
RXRB-205ENST00000483821 ZNF428Q96B54 188 aa17.34■□□□□ 0.37
RXRB-205ENST00000483821 NLRP2Q9NX02 1062 aa17.34■□□□□ 0.37
RXRB-205ENST00000483821 ROBO1Q9Y6N7 1651 aa17.34■□□□□ 0.37
RXRB-205ENST00000483821 ZNF853P0CG23 659 aa17.33■□□□□ 0.36
RXRB-205ENST00000483821 LAS1LQ9Y4W2 734 aaKnown RBP17.33■□□□□ 0.36
RXRB-205ENST00000483821 UBAP1LF5GYI3 381 aa17.32■□□□□ 0.36
RXRB-205ENST00000483821 CHRNA2Q15822 529 aa17.32■□□□□ 0.36
RXRB-205ENST00000483821 USHBP1Q8N6Y0 703 aa17.32■□□□□ 0.36
RXRB-205ENST00000483821 RAPGEF4Q8WZA2 1011 aa17.32■□□□□ 0.36
RXRB-205ENST00000483821 CRYBG1Q9Y4K1 1723 aa17.32■□□□□ 0.36
RXRB-205ENST00000483821 EXOSC9Q06265 439 aaKnown RBP17.31■□□□□ 0.36
RXRB-205ENST00000483821 TSR2Q969E8 191 aaKnown RBP17.31■□□□□ 0.36
RXRB-205ENST00000483821 MAP3K5Q99683 1374 aa17.3■□□□□ 0.36
RXRB-205ENST00000483821 IRX6P78412 446 aaPredicted RBP17.3■□□□□ 0.36
RXRB-205ENST00000483821 BABAM1Q9NWV8 329 aa17.3■□□□□ 0.36
RXRB-205ENST00000483821 PPP4R2Q9NY27 417 aa17.3■□□□□ 0.36
RXRB-205ENST00000483821 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.3■□□□□ 0.36
RXRB-205ENST00000483821 FAM83GA6ND36 823 aa17.29■□□□□ 0.36
RXRB-205ENST00000483821 TATP17735 454 aaPredicted RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms