RNA–Protein interactions for RNA: ENST00000483645.5

MSL3-216, Transcript of MSL complex subunit 3, humanhuman

TSL 4

Gene MSL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-216ENST00000483645 TRIM52Q96A61 297 aa8.92□□□□□ -0.98
MSL3-216ENST00000483645 PCDHB9Q9Y5E1 797 aa8.92□□□□□ -0.98
MSL3-216ENST00000483645 EMILIN1Q9Y6C2 1016 aa8.92□□□□□ -0.98
MSL3-216ENST00000483645 ZIC2O95409 532 aaPredicted RBP8.91□□□□□ -0.98
MSL3-216ENST00000483645 FBXO45P0C2W1 286 aa8.91□□□□□ -0.98
MSL3-216ENST00000483645 FLIIQ13045 1269 aa8.91□□□□□ -0.98
MSL3-216ENST00000483645 MCM6Q14566 821 aa8.91□□□□□ -0.98
MSL3-216ENST00000483645 ATP13A2Q9NQ11 1180 aa8.91□□□□□ -0.98
MSL3-216ENST00000483645 PGPEP1Q9NXJ5 209 aa8.91□□□□□ -0.98
MSL3-216ENST00000483645 NR3C2P08235 984 aa8.9□□□□□ -0.98
MSL3-216ENST00000483645 TIMP2P16035 220 aa8.9□□□□□ -0.98
MSL3-216ENST00000483645 SENP2Q9HC62 589 aa8.9□□□□□ -0.98
MSL3-216ENST00000483645 TBC1D2BQ9UPU7 963 aa8.9□□□□□ -0.98
MSL3-216ENST00000483645 WWC1Q8IX03 1113 aa8.89□□□□□ -0.99
MSL3-216ENST00000483645 DACH1Q9UI36 760 aa8.89□□□□□ -0.99
MSL3-216ENST00000483645 UPP2O95045 317 aa8.88□□□□□ -0.99
MSL3-216ENST00000483645 ABL2P42684 1182 aa8.88□□□□□ -0.99
MSL3-216ENST00000483645 KIFC2Q96AC6 838 aa8.88□□□□□ -0.99
MSL3-216ENST00000483645 ITPKCQ96DU7 683 aa8.88□□□□□ -0.99
MSL3-216ENST00000483645 C11orf95C9JLR9 678 aaPredicted RBP8.87□□□□□ -0.99
MSL3-216ENST00000483645 RAD21O60216 631 aa8.87□□□□□ -0.99
MSL3-216ENST00000483645 RAB15P59190 212 aa8.87□□□□□ -0.99
MSL3-216ENST00000483645 SCARF1Q14162 830 aa8.87□□□□□ -0.99
MSL3-216ENST00000483645 PPP1R26Q5T8A7 1209 aaPredicted RBP8.87□□□□□ -0.99
MSL3-216ENST00000483645 GDPD2Q9HCC8 539 aa8.87□□□□□ -0.99
MSL3-216ENST00000483645 EIF4G2P78344 907 aaKnown RBP eCLIP8.86□□□□□ -0.99
MSL3-216ENST00000483645 INTS6LQ5JSJ4 861 aaKnown RBP8.86□□□□□ -0.99
MSL3-216ENST00000483645 RNF20Q5VTR2 975 aa8.86□□□□□ -0.99
MSL3-216ENST00000483645 SEPT12Q8IYM1 358 aa8.86□□□□□ -0.99
MSL3-216ENST00000483645 KLF16Q9BXK1 252 aaPredicted RBP8.86□□□□□ -0.99
MSL3-216ENST00000483645 ZFAND3Q9H8U3 227 aa8.86□□□□□ -0.99
MSL3-216ENST00000483645 GMPR2Q9P2T1 348 aaKnown RBP8.86□□□□□ -0.99
MSL3-216ENST00000483645 BMP1P13497 986 aa8.85□□□□□ -0.99
MSL3-216ENST00000483645 UBTFP17480 764 aaKnown RBP8.85□□□□□ -0.99
MSL3-216ENST00000483645 WASHC4Q2M389 1173 aa8.85□□□□□ -0.99
MSL3-216ENST00000483645 CCDC125Q86Z20 511 aa8.85□□□□□ -0.99
MSL3-216ENST00000483645 MRPL14Q6P1L8 145 aaKnown RBP8.84□□□□□ -0.99
MSL3-216ENST00000483645 ESPNB1AK53 854 aa8.83□□□□□ -1
MSL3-216ENST00000483645 GPR37L1O60883 481 aa8.83□□□□□ -1
MSL3-216ENST00000483645 TRIM47Q96LD4 638 aa8.83□□□□□ -1
MSL3-216ENST00000483645 POTECB2RU33 542 aa8.82□□□□□ -1
MSL3-216ENST00000483645 GIGYF1O75420 1035 aaPredicted RBP8.81□□□□□ -1
MSL3-216ENST00000483645 TRIM46Q7Z4K8 759 aa8.81□□□□□ -1
MSL3-216ENST00000483645 MEIOBQ8N635 442 aa8.81□□□□□ -1
MSL3-216ENST00000483645 PURBQ96QR8 312 aaKnown RBP8.81□□□□□ -1
MSL3-216ENST00000483645 TSEN34Q9BSV6 310 aaKnown RBP8.81□□□□□ -1
MSL3-216ENST00000483645 ESF1Q9H501 851 aaKnown RBP8.81□□□□□ -1
MSL3-216ENST00000483645 COG6Q9Y2V7 657 aa8.81□□□□□ -1
MSL3-216ENST00000483645 ERVH48-1M5A8F1 160 aa8.8□□□□□ -1
MSL3-216ENST00000483645 BMP2P12643 396 aa8.8□□□□□ -1
MSL3-216ENST00000483645 VAC14Q08AM6 782 aa8.8□□□□□ -1
MSL3-216ENST00000483645 IRF5Q13568 498 aa8.8□□□□□ -1
MSL3-216ENST00000483645 C6orf118Q5T5N4 469 aa8.8□□□□□ -1
MSL3-216ENST00000483645 LINC00528Q8N1L1 170 aa8.8□□□□□ -1
MSL3-216ENST00000483645 ZFP42Q96MM3 310 aa8.8□□□□□ -1
MSL3-216ENST00000483645 TMPRSS4Q9NRS4 437 aa8.79□□□□□ -1
MSL3-216ENST00000483645 SOX11P35716 441 aa8.78□□□□□ -1
MSL3-216ENST00000483645 SEMA3FQ13275 785 aa8.78□□□□□ -1
MSL3-216ENST00000483645 ZNF784Q8NCA9 323 aaPredicted RBP8.78□□□□□ -1
MSL3-216ENST00000483645 SNRPBP14678 240 aaKnown RBP8.77□□□□□ -1.01
MSL3-216ENST00000483645 CBLBQ13191 982 aa8.77□□□□□ -1.01
MSL3-216ENST00000483645 SLFNL1Q499Z3 407 aa8.77□□□□□ -1.01
MSL3-216ENST00000483645 Q6ZVU0 165 aa8.77□□□□□ -1.01
MSL3-216ENST00000483645 CEP126Q9P2H0 1117 aa8.77□□□□□ -1.01
MSL3-216ENST00000483645 POM121Q96HA1 1249 aa8.76□□□□□ -1.01
MSL3-216ENST00000483645 CYLDQ9NQC7 956 aa8.76□□□□□ -1.01
MSL3-216ENST00000483645 PCDHB11Q9Y5F2 797 aa8.76□□□□□ -1.01
MSL3-216ENST00000483645 MAN1A2O60476 641 aa8.74□□□□□ -1.01
MSL3-216ENST00000483645 ADH1AP07327 375 aa8.74□□□□□ -1.01
MSL3-216ENST00000483645 MYCP01106 439 aaPredicted RBP8.73□□□□□ -1.01
MSL3-216ENST00000483645 RELBQ01201 579 aa8.73□□□□□ -1.01
MSL3-216ENST00000483645 CC2D2BQ6DHV5 1058 aa8.73□□□□□ -1.01
MSL3-216ENST00000483645 LILRA1O75019 489 aa8.72□□□□□ -1.01
MSL3-216ENST00000483645 RNF135Q8IUD6 432 aa8.72□□□□□ -1.01
MSL3-216ENST00000483645 AGBL1Q96MI9 1066 aa8.72□□□□□ -1.01
MSL3-216ENST00000483645 TTLL8A6PVC2 850 aa8.71□□□□□ -1.02
MSL3-216ENST00000483645 ATP5J2-PTCD1G3V325 749 aa8.71□□□□□ -1.02
MSL3-216ENST00000483645 SPINT1O43278 529 aa8.71□□□□□ -1.02
MSL3-216ENST00000483645 ERVK-9P63128 1117 aa8.71□□□□□ -1.02
MSL3-216ENST00000483645 ZNF775Q96BV0 537 aaPredicted RBP8.71□□□□□ -1.02
MSL3-216ENST00000483645 DOLKQ9UPQ8 538 aa8.71□□□□□ -1.02
MSL3-216ENST00000483645 ADD1P35611 737 aaKnown RBP8.7□□□□□ -1.02
MSL3-216ENST00000483645 CYP2U1Q7Z449 544 aa8.7□□□□□ -1.02
MSL3-216ENST00000483645 SIRT1Q96EB6 747 aa8.7□□□□□ -1.02
MSL3-216ENST00000483645 ZNF395Q9H8N7 513 aaPredicted RBP8.7□□□□□ -1.02
MSL3-216ENST00000483645 POLMQ9NP87 494 aaPredicted RBP8.7□□□□□ -1.02
MSL3-216ENST00000483645 PTGIRP43119 386 aa8.69□□□□□ -1.02
MSL3-216ENST00000483645 PROSER2Q86WR7 435 aaPredicted RBP8.69□□□□□ -1.02
MSL3-216ENST00000483645 CLUAP1Q96AJ1 413 aa8.69□□□□□ -1.02
MSL3-216ENST00000483645 SOS2Q07890 1332 aaPredicted RBP8.69□□□□□ -1.02
MSL3-216ENST00000483645 USP4Q13107 963 aa8.68□□□□□ -1.02
MSL3-216ENST00000483645 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.68□□□□□ -1.022e-6■■□□□ 13.3
MSL3-216ENST00000483645 CCDC85AQ96PX6 553 aaPredicted RBP8.68□□□□□ -1.02
MSL3-216ENST00000483645 INSM2Q96T92 566 aaPredicted RBP8.68□□□□□ -1.02
MSL3-216ENST00000483645 LOC100996750A0A140TA64 210 aa8.67□□□□□ -1.02
MSL3-216ENST00000483645 MAP7D1Q3KQU3 841 aa8.67□□□□□ -1.02
MSL3-216ENST00000483645 KRTAP4-6Q9BYQ5 205 aa8.67□□□□□ -1.02
MSL3-216ENST00000483645 SCTRP47872 440 aa8.66□□□□□ -1.02
MSL3-216ENST00000483645 OXLD1Q5BKU9 147 aa8.66□□□□□ -1.02
MSL3-216ENST00000483645 PHTF2Q8N3S3 785 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms