RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 LRSAM1Q6UWE0 723 aa14.56□□□□□ -0.08
VTI1A-205ENST00000483122 TMEM63CQ9P1W3 806 aa14.56□□□□□ -0.08
VTI1A-205ENST00000483122 NSFL1CQ9UNZ2 370 aaKnown RBP14.56□□□□□ -0.08
VTI1A-205ENST00000483122 ZNF710Q8N1W2 664 aa14.55□□□□□ -0.08
VTI1A-205ENST00000483122 PPP6R1Q9UPN7 881 aa14.55□□□□□ -0.08
VTI1A-205ENST00000483122 GGT6Q6P531 493 aa14.55□□□□□ -0.08
VTI1A-205ENST00000483122 RNF214Q8ND24 703 aa14.55□□□□□ -0.08
VTI1A-205ENST00000483122 MYRIPQ8NFW9 859 aa14.55□□□□□ -0.08
VTI1A-205ENST00000483122 U2AF1L5P0DN76 240 aaPredicted RBP14.54□□□□□ -0.08
VTI1A-205ENST00000483122 CBX1P83916 185 aa14.54□□□□□ -0.08
VTI1A-205ENST00000483122 U2AF1Q01081 240 aaKnown RBP eCLIP14.54□□□□□ -0.08
VTI1A-205ENST00000483122 NOS1P29475 1434 aa14.54□□□□□ -0.08
VTI1A-205ENST00000483122 FER1L4A9Z1Z3 1794 aa14.53□□□□□ -0.08
VTI1A-205ENST00000483122 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.53□□□□□ -0.08
VTI1A-205ENST00000483122 LMTK2Q8IWU2 1503 aa14.53□□□□□ -0.08
VTI1A-205ENST00000483122 ZDHHC9Q9Y397 364 aa14.53□□□□□ -0.08
VTI1A-205ENST00000483122 ADGRB2O60241 1585 aa14.53□□□□□ -0.08
VTI1A-205ENST00000483122 CLTCL1P53675 1640 aa14.53□□□□□ -0.08
VTI1A-205ENST00000483122 ADAMTSL3P82987 1691 aa14.52□□□□□ -0.08
VTI1A-205ENST00000483122 ABCC3O15438 1527 aa14.52□□□□□ -0.08
VTI1A-205ENST00000483122 ZGPATQ8N5A5 531 aaKnown RBP14.52□□□□□ -0.08
VTI1A-205ENST00000483122 C1orf115Q9H7X2 142 aa14.52□□□□□ -0.08
VTI1A-205ENST00000483122 TET3O43151 1660 aa14.52□□□□□ -0.09
VTI1A-205ENST00000483122 CLTCQ00610 1675 aaKnown RBP14.52□□□□□ -0.09
VTI1A-205ENST00000483122 PPIP5K1Q6PFW1 1433 aa14.52□□□□□ -0.09
VTI1A-205ENST00000483122 FAM177BA6PVY3 158 aa14.52□□□□□ -0.09
VTI1A-205ENST00000483122 KIAA2012Q0VF49 1180 aa14.52□□□□□ -0.09
VTI1A-205ENST00000483122 MLECQ14165 292 aa14.52□□□□□ -0.09
VTI1A-205ENST00000483122 RABEP1Q15276 862 aa14.52□□□□□ -0.09
VTI1A-205ENST00000483122 DNTTIP2Q5QJE6 756 aaKnown RBP14.52□□□□□ -0.09
VTI1A-205ENST00000483122 CFAP53Q96M91 514 aa14.52□□□□□ -0.09
VTI1A-205ENST00000483122 SLC12A5Q9H2X9 1139 aa14.52□□□□□ -0.09
VTI1A-205ENST00000483122 MROH2AA6NES4 1674 aa14.51□□□□□ -0.09
VTI1A-205ENST00000483122 PTMAP06454 111 aaKnown RBP14.51□□□□□ -0.09
VTI1A-205ENST00000483122 MPNDQ8N594 471 aa14.51□□□□□ -0.09
VTI1A-205ENST00000483122 CAMSAP1Q5T5Y3 1602 aa14.51□□□□□ -0.09
VTI1A-205ENST00000483122 PTPRTO14522 1441 aa14.51□□□□□ -0.09
VTI1A-205ENST00000483122 KIAA1210Q9ULL0 1709 aa14.51□□□□□ -0.09
VTI1A-205ENST00000483122 TRPM2O94759 1503 aa14.51□□□□□ -0.09
VTI1A-205ENST00000483122 CDC45O75419 566 aa14.51□□□□□ -0.09
VTI1A-205ENST00000483122 ATP2B3Q16720 1220 aa14.51□□□□□ -0.09
VTI1A-205ENST00000483122 TRIM35Q9UPQ4 493 aa14.51□□□□□ -0.09
VTI1A-205ENST00000483122 NCBP3Q53F19 620 aaKnown RBP14.5□□□□□ -0.09
VTI1A-205ENST00000483122 GSPT1P15170 499 aaKnown RBP14.49□□□□□ -0.09
VTI1A-205ENST00000483122 PPP4R3BQ5MIZ7 849 aa14.49□□□□□ -0.09
VTI1A-205ENST00000483122 FOXD4L5Q5VV16 416 aaPredicted RBP14.49□□□□□ -0.09
VTI1A-205ENST00000483122 FOXD4L4Q8WXT5 416 aaPredicted RBP14.49□□□□□ -0.09
VTI1A-205ENST00000483122 STAC3Q96MF2 364 aa14.49□□□□□ -0.09
VTI1A-205ENST00000483122 SLC24A1O60721 1099 aa14.49□□□□□ -0.09
VTI1A-205ENST00000483122 GCC1Q96CN9 775 aa14.49□□□□□ -0.09
VTI1A-205ENST00000483122 ZNF830Q96NB3 372 aaPredicted RBP14.49□□□□□ -0.09
VTI1A-205ENST00000483122 ESF1Q9H501 851 aaKnown RBP14.49□□□□□ -0.09
VTI1A-205ENST00000483122 EFCAB6Q5THR3 1501 aa14.48□□□□□ -0.09
VTI1A-205ENST00000483122 IPO8O15397 1037 aaKnown RBP14.48□□□□□ -0.09
VTI1A-205ENST00000483122 TMPOP42166 694 aaKnown RBP14.48□□□□□ -0.09
VTI1A-205ENST00000483122 GTPBP4Q9BZE4 634 aaKnown RBP14.48□□□□□ -0.09
VTI1A-205ENST00000483122 ABCC11Q96J66 1382 aa14.47□□□□□ -0.09
VTI1A-205ENST00000483122 ADGRF5Q8IZF2 1346 aa14.47□□□□□ -0.09
VTI1A-205ENST00000483122 C17orf53Q8N3J3 647 aaPredicted RBP14.47□□□□□ -0.09
VTI1A-205ENST00000483122 CWC22Q9HCG8 908 aaKnown RBP14.47□□□□□ -0.09
VTI1A-205ENST00000483122 RIMS1Q86UR5 1692 aaKnown RBP14.47□□□□□ -0.09
VTI1A-205ENST00000483122 ZBTB7BO15156 539 aaPredicted RBP14.46□□□□□ -0.09
VTI1A-205ENST00000483122 SIRT2Q8IXJ6 389 aa14.46□□□□□ -0.09
VTI1A-205ENST00000483122 USP26Q9BXU7 913 aa14.46□□□□□ -0.09
VTI1A-205ENST00000483122 GTF2F1P35269 517 aaKnown RBP eCLIP14.46□□□□□ -0.09
VTI1A-205ENST00000483122 PRIMPOLQ96LW4 560 aa14.46□□□□□ -0.09
VTI1A-205ENST00000483122 PLEKHF1Q96S99 279 aa14.46□□□□□ -0.09
VTI1A-205ENST00000483122 BBXQ8WY36 941 aaPredicted RBP14.45□□□□□ -0.1
VTI1A-205ENST00000483122 U2SURPO15042 1029 aaKnown RBP14.45□□□□□ -0.1
VTI1A-205ENST00000483122 KIF20AO95235 890 aa14.45□□□□□ -0.1
VTI1A-205ENST00000483122 HMGN5P82970 282 aaKnown RBP14.45□□□□□ -0.1
VTI1A-205ENST00000483122 NOLC1Q14978 699 aaKnown RBP eCLIP14.45□□□□□ -0.1
VTI1A-205ENST00000483122 TSPY26PQ9H489 355 aa14.45□□□□□ -0.1
VTI1A-205ENST00000483122 MED14O60244 1454 aa14.45□□□□□ -0.1
VTI1A-205ENST00000483122 SPDYE4A6NLX3 237 aa14.44□□□□□ -0.1
VTI1A-205ENST00000483122 PIBF1Q8WXW3 757 aa14.44□□□□□ -0.1
VTI1A-205ENST00000483122 GTF2E1P29083 439 aaPredicted RBP14.44□□□□□ -0.1
VTI1A-205ENST00000483122 BCL2L12Q9HB09 334 aa14.44□□□□□ -0.1
VTI1A-205ENST00000483122 C3P01024 1663 aa14.44□□□□□ -0.1
VTI1A-205ENST00000483122 MYO3AQ8NEV4 1616 aa14.43□□□□□ -0.1
VTI1A-205ENST00000483122 LETM1O95202 739 aaPredicted RBP14.43□□□□□ -0.1
VTI1A-205ENST00000483122 PLEKHM2Q8IWE5 1019 aa14.43□□□□□ -0.1
VTI1A-205ENST00000483122 TTC12Q9H892 705 aaPredicted RBP14.43□□□□□ -0.1
VTI1A-205ENST00000483122 MBD3O95983 291 aa14.42□□□□□ -0.1
VTI1A-205ENST00000483122 KIF3AQ9Y496 699 aa14.42□□□□□ -0.1
VTI1A-205ENST00000483122 SBNO2Q9Y2G9 1366 aa14.42□□□□□ -0.1
VTI1A-205ENST00000483122 NPATQ14207 1427 aa14.42□□□□□ -0.1
VTI1A-205ENST00000483122 IGSF3O75054 1194 aa14.42□□□□□ -0.1
VTI1A-205ENST00000483122 ALDH1L2Q3SY69 923 aa14.42□□□□□ -0.1
VTI1A-205ENST00000483122 IL16Q14005 1332 aa14.41□□□□□ -0.1
VTI1A-205ENST00000483122 PREX1Q8TCU6 1659 aa14.41□□□□□ -0.1
VTI1A-205ENST00000483122 USP32Q8NFA0 1604 aa14.41□□□□□ -0.1
VTI1A-205ENST00000483122 ST18O60284 1047 aa14.41□□□□□ -0.1
VTI1A-205ENST00000483122 C16orf71Q8IYS4 520 aaPredicted RBP14.41□□□□□ -0.1
VTI1A-205ENST00000483122 TRAK1Q9UPV9 953 aa14.41□□□□□ -0.1
VTI1A-205ENST00000483122 TTC22Q5TAA0 569 aa14.4□□□□□ -0.1
VTI1A-205ENST00000483122 USP25Q9UHP3 1055 aa14.4□□□□□ -0.1
VTI1A-205ENST00000483122 UGGT1Q9NYU2 1555 aa14.39□□□□□ -0.11
VTI1A-205ENST00000483122 PDCL2Q8N4E4 241 aa14.39□□□□□ -0.11
VTI1A-205ENST00000483122 SPATA31D1Q6ZQQ2 1576 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms