RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 PHRF1Q9P1Y6 1649 aaKnown RBP18.22■□□□□ 0.51
COL21A1-209ENST00000482933 CABP1Q9NZU7 370 aa18.22■□□□□ 0.51
COL21A1-209ENST00000482933 KIAA0232Q92628 1395 aa18.21■□□□□ 0.51
COL21A1-209ENST00000482933 NLRP13Q86W25 1043 aa18.21■□□□□ 0.51
COL21A1-209ENST00000482933 ZC3H6P61129 1189 aaKnown RBP18.2■□□□□ 0.5
COL21A1-209ENST00000482933 BRWD3Q6RI45 1802 aa18.19■□□□□ 0.5
COL21A1-209ENST00000482933 A0A0G2JS52 829 aa18.19■□□□□ 0.5
COL21A1-209ENST00000482933 MYT1Q01538 1121 aa18.19■□□□□ 0.5
COL21A1-209ENST00000482933 CARD11Q9BXL7 1154 aa18.19■□□□□ 0.5
COL21A1-209ENST00000482933 KRT27Q7Z3Y8 459 aa18.18■□□□□ 0.5
COL21A1-209ENST00000482933 SPATA31A5Q5VU36 1347 aa18.18■□□□□ 0.5
COL21A1-209ENST00000482933 SPATA31A7Q8IWB4 1347 aa18.18■□□□□ 0.5
COL21A1-209ENST00000482933 USP6P35125 1406 aa18.17■□□□□ 0.5
COL21A1-209ENST00000482933 CHRNA2Q15822 529 aa18.17■□□□□ 0.5
COL21A1-209ENST00000482933 FAM98CQ17RN3 349 aaKnown RBP18.17■□□□□ 0.5
COL21A1-209ENST00000482933 USP19O94966 1318 aa18.17■□□□□ 0.5
COL21A1-209ENST00000482933 LHX8Q68G74 356 aa18.16■□□□□ 0.5
COL21A1-209ENST00000482933 RASEFQ8IZ41 740 aa18.16■□□□□ 0.5
COL21A1-209ENST00000482933 SBNO2Q9Y2G9 1366 aa18.15■□□□□ 0.5
COL21A1-209ENST00000482933 NRKQ7Z2Y5 1582 aa18.15■□□□□ 0.5
COL21A1-209ENST00000482933 BLMP54132 1417 aaPredicted RBP18.15■□□□□ 0.5
COL21A1-209ENST00000482933 EP400Q96L91 3159 aa18.15■□□□□ 0.5
COL21A1-209ENST00000482933 GCP02774 474 aa18.15■□□□□ 0.5
COL21A1-209ENST00000482933 SF3B2Q13435 895 aaKnown RBP18.15■□□□□ 0.5
COL21A1-209ENST00000482933 STRN4Q9NRL3 753 aa18.15■□□□□ 0.5
COL21A1-209ENST00000482933 CPDO75976 1380 aa18.14■□□□□ 0.5
COL21A1-209ENST00000482933 EVA1CP58658 441 aa18.14■□□□□ 0.49
COL21A1-209ENST00000482933 NLRP6P59044 892 aa18.14■□□□□ 0.49
COL21A1-209ENST00000482933 MS4A3Q96HJ5 214 aa18.14■□□□□ 0.49
COL21A1-209ENST00000482933 SPATA31A1Q5TZJ5 1347 aa18.12■□□□□ 0.49
COL21A1-209ENST00000482933 SSH2Q76I76 1423 aa18.12■□□□□ 0.49
COL21A1-209ENST00000482933 AKAP12Q02952 1782 aa18.09■□□□□ 0.49
COL21A1-209ENST00000482933 CAMTA1Q9Y6Y1 1673 aa18.09■□□□□ 0.49
COL21A1-209ENST00000482933 TTC21BQ7Z4L5 1316 aa18.09■□□□□ 0.49
COL21A1-209ENST00000482933 TTC21AQ8NDW8 1320 aa18.09■□□□□ 0.49
COL21A1-209ENST00000482933 NUBP1P53384 320 aa18.08■□□□□ 0.49
COL21A1-209ENST00000482933 KIF12Q96FN5 646 aa18.08■□□□□ 0.49
COL21A1-209ENST00000482933 LMO7Q8WWI1 1683 aa18.08■□□□□ 0.49
COL21A1-209ENST00000482933 THSD7AQ9UPZ6 1657 aa18.08■□□□□ 0.49
COL21A1-209ENST00000482933 SLIT3O75094 1523 aa18.08■□□□□ 0.48
COL21A1-209ENST00000482933 CPSF1Q10570 1443 aaKnown RBP18.08■□□□□ 0.48
COL21A1-209ENST00000482933 BARGINQ6ZT62 677 aa18.07■□□□□ 0.48
COL21A1-209ENST00000482933 USP35Q9P2H5 1018 aa18.07■□□□□ 0.48
COL21A1-209ENST00000482933 KTN1Q86UP2 1357 aaKnown RBP18.07■□□□□ 0.48
COL21A1-209ENST00000482933 PIK3C2AO00443 1686 aa18.07■□□□□ 0.48
COL21A1-209ENST00000482933 SLC24A1O60721 1099 aa18.06■□□□□ 0.48
COL21A1-209ENST00000482933 LARP1Q6PKG0 1096 aaKnown RBP18.06■□□□□ 0.48
COL21A1-209ENST00000482933 KCNH5Q8NCM2 988 aa18.06■□□□□ 0.48
COL21A1-209ENST00000482933 ZBTB7CA1YPR0 619 aa18.06■□□□□ 0.48
COL21A1-209ENST00000482933 TCP11L2Q8N4U5 519 aa18.06■□□□□ 0.48
COL21A1-209ENST00000482933 PUS7Q96PZ0 661 aaKnown RBP18.06■□□□□ 0.48
COL21A1-209ENST00000482933 THRAP3Q9Y2W1 955 aaKnown RBP18.06■□□□□ 0.48
COL21A1-209ENST00000482933 DEFB132Q7Z7B7 95 aa18.05■□□□□ 0.48
COL21A1-209ENST00000482933 TMC1Q8TDI8 760 aa18.05■□□□□ 0.48
COL21A1-209ENST00000482933 FAM212AQ96EL1 285 aa18.05■□□□□ 0.48
COL21A1-209ENST00000482933 AATKQ6ZMQ8 1374 aa18.05■□□□□ 0.48
COL21A1-209ENST00000482933 BAG6P46379 1132 aa18.04■□□□□ 0.48
COL21A1-209ENST00000482933 HDGFL2Q7Z4V5 671 aaPredicted RBP18.04■□□□□ 0.48
COL21A1-209ENST00000482933 COL5A2P05997 1499 aaPredicted RBP18.04■□□□□ 0.48
COL21A1-209ENST00000482933 MON2Q7Z3U7 1717 aa18.02■□□□□ 0.48
COL21A1-209ENST00000482933 VASPP50552 380 aaPredicted RBP18.02■□□□□ 0.48
COL21A1-209ENST00000482933 CRB1P82279 1406 aa18.01■□□□□ 0.47
COL21A1-209ENST00000482933 ST20-MTHFSA0A0A6YYL1 179 aa18.01■□□□□ 0.47
COL21A1-209ENST00000482933 PDE3BQ13370 1112 aa18.01■□□□□ 0.47
COL21A1-209ENST00000482933 FAM182BQ5T319 152 aa18.01■□□□□ 0.47
COL21A1-209ENST00000482933 FAM196AQ6ZSG2 479 aa18.01■□□□□ 0.47
COL21A1-209ENST00000482933 ASTLQ6HA08 431 aaPredicted RBP18■□□□□ 0.47
COL21A1-209ENST00000482933 ARHGEF25Q86VW2 580 aa18■□□□□ 0.47
COL21A1-209ENST00000482933 SLC12A5Q9H2X9 1139 aa18■□□□□ 0.47
COL21A1-209ENST00000482933 TERF2IPQ9NYB0 399 aa18■□□□□ 0.47
COL21A1-209ENST00000482933 RGPD1P0DJD0 1748 aa18■□□□□ 0.47
COL21A1-209ENST00000482933 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.99■□□□□ 0.47
COL21A1-209ENST00000482933 CD163L1Q9NR16 1453 aa17.99■□□□□ 0.47
COL21A1-209ENST00000482933 USP31Q70CQ4 1352 aa17.99■□□□□ 0.47
COL21A1-209ENST00000482933 SOX12O15370 315 aa17.98■□□□□ 0.47
COL21A1-209ENST00000482933 TOM1L2Q6ZVM7 507 aa17.98■□□□□ 0.47
COL21A1-209ENST00000482933 TESK2Q96S53 571 aa17.98■□□□□ 0.47
COL21A1-209ENST00000482933 TIMELESSQ9UNS1 1208 aa17.98■□□□□ 0.47
COL21A1-209ENST00000482933 COL18A1P39060 1754 aa17.98■□□□□ 0.47
COL21A1-209ENST00000482933 NINLQ9Y2I6 1382 aa17.98■□□□□ 0.47
COL21A1-209ENST00000482933 CLSPNQ9HAW4 1339 aa17.98■□□□□ 0.47
COL21A1-209ENST00000482933 WDR17Q8IZU2 1322 aa17.97■□□□□ 0.47
COL21A1-209ENST00000482933 MAP3K13O43283 966 aa17.97■□□□□ 0.47
COL21A1-209ENST00000482933 AXIN2Q9Y2T1 843 aa17.97■□□□□ 0.47
COL21A1-209ENST00000482933 EDC4Q6P2E9 1401 aaKnown RBP17.96■□□□□ 0.47
COL21A1-209ENST00000482933 C11orf95C9JLR9 678 aaPredicted RBP17.96■□□□□ 0.47
COL21A1-209ENST00000482933 SGIP1Q9BQI5 828 aa17.96■□□□□ 0.47
COL21A1-209ENST00000482933 A0A1W2PP64 1363 aa17.95■□□□□ 0.46
COL21A1-209ENST00000482933 NFAT5O94916 1531 aa17.95■□□□□ 0.46
COL21A1-209ENST00000482933 USP54Q70EL1 1684 aa17.95■□□□□ 0.46
COL21A1-209ENST00000482933 DISP2A7MBM2 1401 aa17.95■□□□□ 0.46
COL21A1-209ENST00000482933 CSB-PGBD3P0DP91 1061 aa17.95■□□□□ 0.46
COL21A1-209ENST00000482933 EN1Q05925 392 aaPredicted RBP17.95■□□□□ 0.46
COL21A1-209ENST00000482933 NME9Q86XW9 330 aa17.95■□□□□ 0.46
COL21A1-209ENST00000482933 PARP4Q9UKK3 1724 aaKnown RBP17.95■□□□□ 0.46
COL21A1-209ENST00000482933 ABCC6O95255 1503 aa17.95■□□□□ 0.46
COL21A1-209ENST00000482933 ATMINO43313 823 aaPredicted RBP17.94■□□□□ 0.46
COL21A1-209ENST00000482933 TRIM37O94972 964 aa17.94■□□□□ 0.46
COL21A1-209ENST00000482933 PCGF6Q9BYE7 350 aa17.94■□□□□ 0.46
COL21A1-209ENST00000482933 USP47Q96K76 1375 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms