RNA–Protein interactions for RNA: ENST00000482928.5

TSPAN1-208, Transcript of tetraspanin 1, humanhuman

TSL 2

Gene TSPAN1, Length 844 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-208ENST00000482928 EZH2Q15910 746 aaKnown RBP16.69■□□□□ 0.26
TSPAN1-208ENST00000482928 TTC21BQ7Z4L5 1316 aa16.69■□□□□ 0.26
TSPAN1-208ENST00000482928 NRKQ7Z2Y5 1582 aa16.68■□□□□ 0.26
TSPAN1-208ENST00000482928 NUP188Q5SRE5 1749 aa16.68■□□□□ 0.26
TSPAN1-208ENST00000482928 PSME1Q06323 249 aa16.68■□□□□ 0.26
TSPAN1-208ENST00000482928 RREB1Q92766 1687 aa16.68■□□□□ 0.26
TSPAN1-208ENST00000482928 KIF1AQ12756 1690 aa16.67■□□□□ 0.26
TSPAN1-208ENST00000482928 PAK3O75914 559 aaPredicted RBP16.67■□□□□ 0.26
TSPAN1-208ENST00000482928 NME9Q86XW9 330 aa16.67■□□□□ 0.26
TSPAN1-208ENST00000482928 HNRNPUQ00839 825 aaKnown RBP eCLIP16.66■□□□□ 0.26
TSPAN1-208ENST00000482928 PNISRQ8TF01 805 aaKnown RBP16.66■□□□□ 0.26
TSPAN1-208ENST00000482928 C1orf167Q5SNV9 1468 aa16.66■□□□□ 0.26
TSPAN1-208ENST00000482928 HSPA6P17066 643 aa16.65■□□□□ 0.26
TSPAN1-208ENST00000482928 UNC5CLQ8IV45 518 aa16.65■□□□□ 0.26
TSPAN1-208ENST00000482928 SHANK3Q9BYB0 1731 aa16.65■□□□□ 0.26
TSPAN1-208ENST00000482928 COL13A1Q5TAT6 717 aaPredicted RBP16.64■□□□□ 0.25
TSPAN1-208ENST00000482928 TNS4Q8IZW8 715 aa16.64■□□□□ 0.25
TSPAN1-208ENST00000482928 A0A0G2JS52 829 aa16.63■□□□□ 0.25
TSPAN1-208ENST00000482928 MYT1Q01538 1121 aa16.63■□□□□ 0.25
TSPAN1-208ENST00000482928 MTHFSP49914 203 aa16.62■□□□□ 0.25
TSPAN1-208ENST00000482928 ORAI2Q96SN7 254 aa16.62■□□□□ 0.25
TSPAN1-208ENST00000482928 SLIT2O94813 1529 aa16.6■□□□□ 0.25
TSPAN1-208ENST00000482928 PPM1GO15355 546 aaPredicted RBP16.6■□□□□ 0.25
TSPAN1-208ENST00000482928 ABTB2Q8N961 1025 aa16.6■□□□□ 0.25
TSPAN1-208ENST00000482928 SSH2Q76I76 1423 aa16.6■□□□□ 0.25
TSPAN1-208ENST00000482928 FOXO3O43524 673 aa16.59■□□□□ 0.25
TSPAN1-208ENST00000482928 NLRP6P59044 892 aa16.59■□□□□ 0.25
TSPAN1-208ENST00000482928 NUDCQ9Y266 331 aa16.59■□□□□ 0.25
TSPAN1-208ENST00000482928 NBPF14Q5TI25 921 aa16.58■□□□□ 0.24
TSPAN1-208ENST00000482928 LMOD2Q6P5Q4 547 aa16.58■□□□□ 0.24
TSPAN1-208ENST00000482928 SOS2Q07890 1332 aaPredicted RBP16.58■□□□□ 0.24
TSPAN1-208ENST00000482928 OVOS2A0A0J9YW53 1432 aa16.58■□□□□ 0.24
TSPAN1-208ENST00000482928 OVOS2Q6IE36 1432 aa16.58■□□□□ 0.24
TSPAN1-208ENST00000482928 AATKQ6ZMQ8 1374 aa16.57■□□□□ 0.24
TSPAN1-208ENST00000482928 NPHP3Q7Z494 1330 aa16.57■□□□□ 0.24
TSPAN1-208ENST00000482928 KRT28Q7Z3Y7 464 aa16.57■□□□□ 0.24
TSPAN1-208ENST00000482928 CAMKK2Q96RR4 588 aa16.57■□□□□ 0.24
TSPAN1-208ENST00000482928 CCDC9Q9Y3X0 531 aaKnown RBP16.57■□□□□ 0.24
TSPAN1-208ENST00000482928 PIK3C2AO00443 1686 aa16.56■□□□□ 0.24
TSPAN1-208ENST00000482928 USP31Q70CQ4 1352 aa16.56■□□□□ 0.24
TSPAN1-208ENST00000482928 SOX12O15370 315 aa16.56■□□□□ 0.24
TSPAN1-208ENST00000482928 INSRP06213 1382 aa16.55■□□□□ 0.24
TSPAN1-208ENST00000482928 XPCQ01831 940 aaPredicted RBP16.55■□□□□ 0.24
TSPAN1-208ENST00000482928 NUTM2GQ5VZR2 741 aa16.55■□□□□ 0.24
TSPAN1-208ENST00000482928 PLCH1Q4KWH8 1693 aa16.55■□□□□ 0.24
TSPAN1-208ENST00000482928 DIAPH1O60610 1272 aaKnown RBP16.54■□□□□ 0.24
TSPAN1-208ENST00000482928 FAM83GA6ND36 823 aa16.53■□□□□ 0.24
TSPAN1-208ENST00000482928 U2SURPO15042 1029 aaKnown RBP16.53■□□□□ 0.24
TSPAN1-208ENST00000482928 ONECUT3O60422 494 aaPredicted RBP16.53■□□□□ 0.24
TSPAN1-208ENST00000482928 POLKQ9UBT6 870 aa16.53■□□□□ 0.24
TSPAN1-208ENST00000482928 ADAMTS8Q9UP79 889 aa16.53■□□□□ 0.24
TSPAN1-208ENST00000482928 MAP2P11137 1827 aaKnown RBP16.53■□□□□ 0.24
TSPAN1-208ENST00000482928 NWD2Q9ULI1 1742 aa16.53■□□□□ 0.24
TSPAN1-208ENST00000482928 RRS1Q15050 365 aaKnown RBP16.52■□□□□ 0.24
TSPAN1-208ENST00000482928 FAM182BQ5T319 152 aa16.52■□□□□ 0.24
TSPAN1-208ENST00000482928 EMILIN1Q9Y6C2 1016 aa16.52■□□□□ 0.24
TSPAN1-208ENST00000482928 CASZ1Q86V15 1759 aa16.51■□□□□ 0.23
TSPAN1-208ENST00000482928 ZBED9Q6R2W3 1325 aa16.51■□□□□ 0.23
TSPAN1-208ENST00000482928 USP54Q70EL1 1684 aa16.51■□□□□ 0.23
TSPAN1-208ENST00000482928 U2AF1L5P0DN76 240 aaPredicted RBP16.51■□□□□ 0.23
TSPAN1-208ENST00000482928 U2AF1Q01081 240 aaKnown RBP eCLIP16.51■□□□□ 0.23
TSPAN1-208ENST00000482928 VPS72Q15906 364 aa16.51■□□□□ 0.23
TSPAN1-208ENST00000482928 KCNH5Q8NCM2 988 aa16.51■□□□□ 0.23
TSPAN1-208ENST00000482928 PNNQ9H307 717 aaKnown RBP16.51■□□□□ 0.23
TSPAN1-208ENST00000482928 SMG6Q86US8 1419 aaKnown RBP16.51■□□□□ 0.23
TSPAN1-208ENST00000482928 NEFMP07197 916 aa16.5■□□□□ 0.23
TSPAN1-208ENST00000482928 AMPHP49418 695 aa16.5■□□□□ 0.23
TSPAN1-208ENST00000482928 SBNO1A3KN83 1393 aa16.5■□□□□ 0.23
TSPAN1-208ENST00000482928 PLEKHG5O94827 1062 aa16.49■□□□□ 0.23
TSPAN1-208ENST00000482928 FBLN1P23142 703 aa16.49■□□□□ 0.23
TSPAN1-208ENST00000482928 TRPM3Q9HCF6 1732 aaPredicted RBP16.49■□□□□ 0.23
TSPAN1-208ENST00000482928 COL3A1P02461 1466 aaPredicted RBP16.48■□□□□ 0.23
TSPAN1-208ENST00000482928 TNS3Q68CZ2 1445 aa16.47■□□□□ 0.23
TSPAN1-208ENST00000482928 ZBTB7CA1YPR0 619 aa16.47■□□□□ 0.23
TSPAN1-208ENST00000482928 CCDC146Q8IYE0 955 aa16.47■□□□□ 0.23
TSPAN1-208ENST00000482928 SYT17Q9BSW7 474 aa16.47■□□□□ 0.23
TSPAN1-208ENST00000482928 FHDC1Q9C0D6 1143 aaPredicted RBP16.47■□□□□ 0.23
TSPAN1-208ENST00000482928 ARHGEF10O15013 1369 aa16.47■□□□□ 0.23
TSPAN1-208ENST00000482928 FLT4P35916 1363 aa16.47■□□□□ 0.23
TSPAN1-208ENST00000482928 APBA3O96018 575 aa16.46■□□□□ 0.23
TSPAN1-208ENST00000482928 SALL2Q9Y467 1007 aaPredicted RBP16.46■□□□□ 0.23
TSPAN1-208ENST00000482928 MAP3K19Q56UN5 1328 aa16.45■□□□□ 0.22
TSPAN1-208ENST00000482928 MAPK8IP3Q9UPT6 1336 aa16.45■□□□□ 0.22
TSPAN1-208ENST00000482928 RUNDC1Q96C34 613 aa16.45■□□□□ 0.22
TSPAN1-208ENST00000482928 KIF24Q5T7B8 1368 aa16.45■□□□□ 0.22
TSPAN1-208ENST00000482928 PXDNQ92626 1479 aa16.45■□□□□ 0.22
TSPAN1-208ENST00000482928 TRIM37O94972 964 aa16.44■□□□□ 0.22
TSPAN1-208ENST00000482928 ALS2Q96Q42 1657 aa16.43■□□□□ 0.22
TSPAN1-208ENST00000482928 RTL1A6NKG5 1358 aa16.43■□□□□ 0.22
TSPAN1-208ENST00000482928 HAP1P54257 671 aaPredicted RBP16.43■□□□□ 0.22
TSPAN1-208ENST00000482928 FAM98CQ17RN3 349 aaKnown RBP16.43■□□□□ 0.22
TSPAN1-208ENST00000482928 NGEFQ8N5V2 710 aa16.43■□□□□ 0.22
TSPAN1-208ENST00000482928 SPATA31A3Q5VYP0 1347 aa16.43■□□□□ 0.22
TSPAN1-208ENST00000482928 SLIT3O75094 1523 aa16.42■□□□□ 0.22
TSPAN1-208ENST00000482928 GCP02774 474 aa16.42■□□□□ 0.22
TSPAN1-208ENST00000482928 GPR162Q16538 588 aa16.42■□□□□ 0.22
TSPAN1-208ENST00000482928 USP19O94966 1318 aa16.42■□□□□ 0.22
TSPAN1-208ENST00000482928 APAF1O14727 1248 aa16.41■□□□□ 0.22
TSPAN1-208ENST00000482928 IL13P35225 146 aa16.41■□□□□ 0.22
TSPAN1-208ENST00000482928 LTN1O94822 1766 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms