RNA–Protein interactions for RNA: ENST00000482889.1

CLCC1-209, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 752 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-209ENST00000482889 WASHC4Q2M389 1173 aa6.39□□□□□ -1.39
CLCC1-209ENST00000482889 TBC1D9Q6ZT07 1266 aa6.39□□□□□ -1.39
CLCC1-209ENST00000482889 CYP4X1Q8N118 509 aa6.39□□□□□ -1.39
CLCC1-209ENST00000482889 MPNDQ8N594 471 aa6.39□□□□□ -1.39
CLCC1-209ENST00000482889 SNIP1Q8TAD8 396 aaKnown RBP6.39□□□□□ -1.39
CLCC1-209ENST00000482889 SIAH2O43255 324 aa6.38□□□□□ -1.39
CLCC1-209ENST00000482889 VARSP26640 1264 aaKnown RBP6.38□□□□□ -1.39
CLCC1-209ENST00000482889 LINC01559Q495D7 138 aa6.38□□□□□ -1.39
CLCC1-209ENST00000482889 NBPF14Q5TI25 921 aa6.38□□□□□ -1.39
CLCC1-209ENST00000482889 FOXD4L5Q5VV16 416 aaPredicted RBP6.38□□□□□ -1.39
CLCC1-209ENST00000482889 EHBP1Q8NDI1 1231 aa6.38□□□□□ -1.39
CLCC1-209ENST00000482889 FOXD4L4Q8WXT5 416 aaPredicted RBP6.38□□□□□ -1.39
CLCC1-209ENST00000482889 ZC3H4Q9UPT8 1303 aaKnown RBP6.38□□□□□ -1.39
CLCC1-209ENST00000482889 TMEM88BA6NKF7 163 aa6.37□□□□□ -1.39
CLCC1-209ENST00000482889 MFAP1P55081 439 aaKnown RBP6.37□□□□□ -1.39
CLCC1-209ENST00000482889 TTC24A2A3L6 582 aaPredicted RBP6.36□□□□□ -1.39
CLCC1-209ENST00000482889 FAM187AA6NFU0 413 aa6.36□□□□□ -1.39
CLCC1-209ENST00000482889 AVPP01185 164 aa6.36□□□□□ -1.39
CLCC1-209ENST00000482889 PKDCCQ504Y2 493 aa6.36□□□□□ -1.39
CLCC1-209ENST00000482889 TMCO4Q5TGY1 634 aa6.36□□□□□ -1.39
CLCC1-209ENST00000482889 SH3RF1Q7Z6J0 888 aa6.36□□□□□ -1.39
CLCC1-209ENST00000482889 BPHLQ86WA6 291 aaPredicted RBP6.36□□□□□ -1.39
CLCC1-209ENST00000482889 PIK3CDO00329 1044 aa6.35□□□□□ -1.39
CLCC1-209ENST00000482889 PDXDC2PQ6P474 469 aa6.35□□□□□ -1.39
CLCC1-209ENST00000482889 SH3BP5LQ7L8J4 393 aa6.35□□□□□ -1.39
CLCC1-209ENST00000482889 PNMA1Q8ND90 353 aa6.35□□□□□ -1.39
CLCC1-209ENST00000482889 FKBPLQ9UIM3 349 aa6.35□□□□□ -1.39
CLCC1-209ENST00000482889 MAFBQ9Y5Q3 323 aaPredicted RBP6.35□□□□□ -1.39
CLCC1-209ENST00000482889 SMPD1P17405 629 aa6.34□□□□□ -1.39
CLCC1-209ENST00000482889 CRIPAKQ8N1N5 446 aa6.34□□□□□ -1.39
CLCC1-209ENST00000482889 FAM174AQ8TBP5 190 aa6.34□□□□□ -1.39
CLCC1-209ENST00000482889 FOXJ1Q92949 421 aa6.34□□□□□ -1.39
CLCC1-209ENST00000482889 C1QTNF2Q9BXJ5 285 aa6.34□□□□□ -1.39
CLCC1-209ENST00000482889 GPSM3Q9Y4H4 160 aa6.34□□□□□ -1.39
CLCC1-209ENST00000482889 FBXO45P0C2W1 286 aa6.33□□□□□ -1.4
CLCC1-209ENST00000482889 SMCPP49901 116 aaPredicted RBP6.33□□□□□ -1.4
CLCC1-209ENST00000482889 MYT1Q01538 1121 aa6.33□□□□□ -1.4
CLCC1-209ENST00000482889 CTC1Q2NKJ3 1217 aa6.33□□□□□ -1.4
CLCC1-209ENST00000482889 C4orf48Q5BLP8 95 aa6.33□□□□□ -1.4
CLCC1-209ENST00000482889 KANK4Q5T7N3 995 aaPredicted RBP6.33□□□□□ -1.4
CLCC1-209ENST00000482889 CDK15Q96Q40 435 aa6.33□□□□□ -1.4
CLCC1-209ENST00000482889 J3QL48 77 aa6.32□□□□□ -1.4
CLCC1-209ENST00000482889 ATG7O95352 703 aa6.32□□□□□ -1.4
CLCC1-209ENST00000482889 BRD1O95696 1058 aa6.32□□□□□ -1.4
CLCC1-209ENST00000482889 ALDH1A1P00352 501 aa6.32□□□□□ -1.4
CLCC1-209ENST00000482889 CSB-PGBD3P0DP91 1061 aa6.32□□□□□ -1.4
CLCC1-209ENST00000482889 TRMT44Q8IYL2 757 aaKnown RBP6.32□□□□□ -1.4
CLCC1-209ENST00000482889 SEMA3FQ13275 785 aa6.31□□□□□ -1.4
CLCC1-209ENST00000482889 AGERQ15109 404 aa6.31□□□□□ -1.4
CLCC1-209ENST00000482889 VRTNQ9H8Y1 702 aa6.31□□□□□ -1.4
CLCC1-209ENST00000482889 SLAIN2Q9P270 581 aa6.31□□□□□ -1.4
CLCC1-209ENST00000482889 USTQ9Y2C2 406 aa6.31□□□□□ -1.4
CLCC1-209ENST00000482889 MAP4K5Q9Y4K4 846 aa6.31□□□□□ -1.4
CLCC1-209ENST00000482889 ATP9BO43861 1147 aa6.3□□□□□ -1.4
CLCC1-209ENST00000482889 PTK2Q05397 1052 aa6.3□□□□□ -1.4
CLCC1-209ENST00000482889 OCSTAMPQ9BR26 566 aa6.3□□□□□ -1.4
CLCC1-209ENST00000482889 ZMIZ1Q9ULJ6 1067 aa6.3□□□□□ -1.4
CLCC1-209ENST00000482889 TLL2Q9Y6L7 1015 aa6.3□□□□□ -1.4
CLCC1-209ENST00000482889 IVNS1ABPQ9Y6Y0 642 aa6.3□□□□□ -1.4
CLCC1-209ENST00000482889 POTECB2RU33 542 aa6.29□□□□□ -1.4
CLCC1-209ENST00000482889 ADH1CP00326 375 aa6.29□□□□□ -1.4
CLCC1-209ENST00000482889 KCNA1Q09470 495 aa6.29□□□□□ -1.4
CLCC1-209ENST00000482889 NR1H3Q13133 447 aa6.29□□□□□ -1.4
CLCC1-209ENST00000482889 ERFEQ4G0M1 354 aa6.29□□□□□ -1.4
CLCC1-209ENST00000482889 HPS1Q92902 700 aa6.29□□□□□ -1.4
CLCC1-209ENST00000482889 ARHGAP9Q9BRR9 750 aa6.29□□□□□ -1.4
CLCC1-209ENST00000482889 AAASQ9NRG9 546 aa6.29□□□□□ -1.4
CLCC1-209ENST00000482889 WASF2Q9Y6W5 498 aa6.29□□□□□ -1.4
CLCC1-209ENST00000482889 MAGEB6P1A0A0J9YX57 407 aa6.28□□□□□ -1.4
CLCC1-209ENST00000482889 SOX11P35716 441 aa6.28□□□□□ -1.4
CLCC1-209ENST00000482889 NR5A1Q13285 461 aa6.28□□□□□ -1.4
CLCC1-209ENST00000482889 PHLDB3Q6NSJ2 640 aa6.28□□□□□ -1.4
CLCC1-209ENST00000482889 DEPDC4Q8N2C3 294 aa6.28□□□□□ -1.4
CLCC1-209ENST00000482889 STK32AQ8WU08 396 aa6.28□□□□□ -1.4
CLCC1-209ENST00000482889 CDV3Q9UKY7 258 aaKnown RBP6.28□□□□□ -1.4
CLCC1-209ENST00000482889 AXIN1O15169 862 aa6.27□□□□□ -1.41
CLCC1-209ENST00000482889 TSGA10IPQ3SY00 556 aa6.27□□□□□ -1.41
CLCC1-209ENST00000482889 TMEM164Q5U3C3 297 aa6.27□□□□□ -1.41
CLCC1-209ENST00000482889 ZBTB33Q86T24 672 aa6.27□□□□□ -1.41
CLCC1-209ENST00000482889 CARD14Q9BXL6 1004 aa6.27□□□□□ -1.41
CLCC1-209ENST00000482889 ZBBXA8MT70 800 aa6.26□□□□□ -1.41
CLCC1-209ENST00000482889 GRM5P41594 1212 aa6.26□□□□□ -1.41
CLCC1-209ENST00000482889 PDE4CQ08493 712 aa6.26□□□□□ -1.41
CLCC1-209ENST00000482889 NNTQ13423 1086 aa6.26□□□□□ -1.41
CLCC1-209ENST00000482889 ST8SIA5O15466 376 aa6.25□□□□□ -1.41
CLCC1-209ENST00000482889 SCNN1AP37088 669 aa6.25□□□□□ -1.41
CLCC1-209ENST00000482889 RBM25P49756 843 aaKnown RBP6.25□□□□□ -1.41
CLCC1-209ENST00000482889 EIF4G2P78344 907 aaKnown RBP eCLIP6.25□□□□□ -1.41
CLCC1-209ENST00000482889 PHTF2Q8N3S3 785 aa6.25□□□□□ -1.41
CLCC1-209ENST00000482889 ADAM32Q8TC27 787 aa6.25□□□□□ -1.41
CLCC1-209ENST00000482889 SLC10A4Q96EP9 437 aa6.25□□□□□ -1.41
CLCC1-209ENST00000482889 SKIP12755 728 aa6.24□□□□□ -1.41
CLCC1-209ENST00000482889 ARID5BQ14865 1188 aa6.24□□□□□ -1.41
CLCC1-209ENST00000482889 CRTC2Q53ET0 693 aaPredicted RBP6.24□□□□□ -1.41
CLCC1-209ENST00000482889 VASH1Q7L8A9 365 aaPredicted RBP6.24□□□□□ -1.41
CLCC1-209ENST00000482889 KLF16Q9BXK1 252 aaPredicted RBP6.24□□□□□ -1.41
CLCC1-209ENST00000482889 USP17L3A6NCW0 530 aa6.23□□□□□ -1.41
CLCC1-209ENST00000482889 USP17L4A6NCW7 530 aa6.23□□□□□ -1.41
CLCC1-209ENST00000482889 NR3C2P08235 984 aa6.23□□□□□ -1.41
CLCC1-209ENST00000482889 FAM69CQ0P6D2 419 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms