RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 CDK19Q9BWU1 502 aa15.44■□□□□ 0.06
CCDC78-213ENST00000482878 ARHGAP31Q2M1Z3 1444 aa15.44■□□□□ 0.06
CCDC78-213ENST00000482878 CFAP74Q9C0B2 1584 aa15.44■□□□□ 0.06
CCDC78-213ENST00000482878 YTHDC2Q9H6S0 1430 aaKnown RBP15.43■□□□□ 0.06
CCDC78-213ENST00000482878 THUMPD2Q9BTF0 503 aaKnown RBP15.43■□□□□ 0.06
CCDC78-213ENST00000482878 DDX11L8A8MPP1 907 aa15.43■□□□□ 0.06
CCDC78-213ENST00000482878 DDIT3P35638 169 aa15.43■□□□□ 0.06
CCDC78-213ENST00000482878 PHACTR3Q96KR7 559 aa15.42■□□□□ 0.06
CCDC78-213ENST00000482878 C1orf115Q9H7X2 142 aa15.42■□□□□ 0.06
CCDC78-213ENST00000482878 ZBTB7BO15156 539 aaPredicted RBP15.42■□□□□ 0.06
CCDC78-213ENST00000482878 PDE4CQ08493 712 aa15.42■□□□□ 0.06
CCDC78-213ENST00000482878 POLKQ9UBT6 870 aa15.42■□□□□ 0.06
CCDC78-213ENST00000482878 NCOA3Q9Y6Q9 1424 aa15.42■□□□□ 0.06
CCDC78-213ENST00000482878 ANKRD45Q5TZF3 282 aa15.41■□□□□ 0.06
CCDC78-213ENST00000482878 HMOX1P09601 288 aa15.41■□□□□ 0.06
CCDC78-213ENST00000482878 TSPYL6Q8N831 410 aa15.41■□□□□ 0.06
CCDC78-213ENST00000482878 SNX21Q969T3 373 aa15.41■□□□□ 0.06
CCDC78-213ENST00000482878 PPIP5K1Q6PFW1 1433 aa15.41■□□□□ 0.06
CCDC78-213ENST00000482878 LRRC7Q96NW7 1537 aa15.41■□□□□ 0.06
CCDC78-213ENST00000482878 VAMP4O75379 141 aa15.41■□□□□ 0.06
CCDC78-213ENST00000482878 BRPF1P55201 1214 aaPredicted RBP15.41■□□□□ 0.06
CCDC78-213ENST00000482878 BMP2KLQ5H9B9 411 aa15.41■□□□□ 0.06
CCDC78-213ENST00000482878 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.41■□□□□ 0.06
CCDC78-213ENST00000482878 FAM135BQ49AJ0 1406 aa15.4■□□□□ 0.06
CCDC78-213ENST00000482878 DIP2CQ9Y2E4 1556 aa15.4■□□□□ 0.06
CCDC78-213ENST00000482878 ZBTB7CA1YPR0 619 aa15.4■□□□□ 0.06
CCDC78-213ENST00000482878 TRHP20396 242 aaPredicted RBP15.4■□□□□ 0.06
CCDC78-213ENST00000482878 MRPL50Q8N5N7 158 aaKnown RBP15.4■□□□□ 0.06
CCDC78-213ENST00000482878 KIF2CQ99661 725 aa15.4■□□□□ 0.06
CCDC78-213ENST00000482878 ELL2O00472 640 aaPredicted RBP15.39■□□□□ 0.05
CCDC78-213ENST00000482878 ARHGEF40Q8TER5 1519 aa15.39■□□□□ 0.05
CCDC78-213ENST00000482878 MAP7D2Q96T17 732 aa15.39■□□□□ 0.05
CCDC78-213ENST00000482878 NFE2L2Q16236 605 aa15.38■□□□□ 0.05
CCDC78-213ENST00000482878 ZNF428Q96B54 188 aa15.38■□□□□ 0.05
CCDC78-213ENST00000482878 ANKRD26Q9UPS8 1709 aa15.38■□□□□ 0.05
CCDC78-213ENST00000482878 WAPLQ7Z5K2 1190 aa15.38■□□□□ 0.05
CCDC78-213ENST00000482878 SIRT2Q8IXJ6 389 aa15.38■□□□□ 0.05
CCDC78-213ENST00000482878 CD2BP2O95400 341 aaKnown RBP15.38■□□□□ 0.05
CCDC78-213ENST00000482878 C14orf37Q86TY3 774 aa15.38■□□□□ 0.05
CCDC78-213ENST00000482878 TNPO1Q92973 898 aaKnown RBP15.38■□□□□ 0.05
CCDC78-213ENST00000482878 YEATS2Q9ULM3 1422 aa15.38■□□□□ 0.05
CCDC78-213ENST00000482878 ZSCAN30Q86W11 494 aa15.37■□□□□ 0.05
CCDC78-213ENST00000482878 GCC1Q96CN9 775 aa15.37■□□□□ 0.05
CCDC78-213ENST00000482878 HSP90AB1P08238 724 aaKnown RBP15.37■□□□□ 0.05
CCDC78-213ENST00000482878 GAS2L3Q86XJ1 694 aa15.37■□□□□ 0.05
CCDC78-213ENST00000482878 TMEM131LA2VDJ0 1609 aa15.37■□□□□ 0.05
CCDC78-213ENST00000482878 CLTCQ00610 1675 aaKnown RBP15.37■□□□□ 0.05
CCDC78-213ENST00000482878 NEO1Q92859 1461 aa15.37■□□□□ 0.05
CCDC78-213ENST00000482878 TBC1D9Q6ZT07 1266 aa15.36■□□□□ 0.05
CCDC78-213ENST00000482878 ARHGAP45Q92619 1136 aa15.36■□□□□ 0.05
CCDC78-213ENST00000482878 EMILIN1Q9Y6C2 1016 aa15.36■□□□□ 0.05
CCDC78-213ENST00000482878 CDC42BPGQ6DT37 1551 aa15.36■□□□□ 0.05
CCDC78-213ENST00000482878 MBIPQ9NS73 344 aa15.36■□□□□ 0.05
CCDC78-213ENST00000482878 ISY1Q9ULR0 285 aaKnown RBP15.36■□□□□ 0.05
CCDC78-213ENST00000482878 PIK3R4Q99570 1358 aa15.36■□□□□ 0.05
CCDC78-213ENST00000482878 UQCRHLA0A096LP55 91 aa15.36■□□□□ 0.05
CCDC78-213ENST00000482878 UQCRHP07919 91 aa15.36■□□□□ 0.05
CCDC78-213ENST00000482878 NASPP49321 788 aaPredicted RBP15.36■□□□□ 0.05
CCDC78-213ENST00000482878 OFD1O75665 1012 aa15.35■□□□□ 0.05
CCDC78-213ENST00000482878 FOXD4L1Q9NU39 408 aa15.35■□□□□ 0.05
CCDC78-213ENST00000482878 PTCH1Q13635 1447 aa15.35■□□□□ 0.05
CCDC78-213ENST00000482878 RBM42Q9BTD8 480 aaKnown RBP15.35■□□□□ 0.05
CCDC78-213ENST00000482878 MYO5BQ9ULV0 1848 aa15.34■□□□□ 0.05
CCDC78-213ENST00000482878 CCDC173Q0VFZ6 552 aa15.34■□□□□ 0.05
CCDC78-213ENST00000482878 IFT57Q9NWB7 429 aa15.34■□□□□ 0.05
CCDC78-213ENST00000482878 ALKQ9UM73 1620 aa15.34■□□□□ 0.05
CCDC78-213ENST00000482878 ABCC4O15439 1325 aa15.34■□□□□ 0.05
CCDC78-213ENST00000482878 ZNF853P0CG23 659 aa15.34■□□□□ 0.05
CCDC78-213ENST00000482878 GNAI1P63096 354 aa15.34■□□□□ 0.05
CCDC78-213ENST00000482878 RAB3GAP1Q15042 981 aa15.34■□□□□ 0.05
CCDC78-213ENST00000482878 IL13P35225 146 aa15.33■□□□□ 0.05
CCDC78-213ENST00000482878 CIZ1Q9ULV3 898 aaPredicted RBP15.33■□□□□ 0.05
CCDC78-213ENST00000482878 TXNDC2Q86VQ3 553 aa15.33■□□□□ 0.04
CCDC78-213ENST00000482878 C8orf58Q8NAV2 365 aa15.33■□□□□ 0.04
CCDC78-213ENST00000482878 GBP4Q96PP9 640 aa15.33■□□□□ 0.04
CCDC78-213ENST00000482878 CHMP4BQ9H444 224 aaKnown RBP15.33■□□□□ 0.04
CCDC78-213ENST00000482878 TWISTNBQ3B726 338 aaPredicted RBP15.33■□□□□ 0.04
CCDC78-213ENST00000482878 ZRANB1Q9UGI0 708 aa15.33■□□□□ 0.04
CCDC78-213ENST00000482878 BBXQ8WY36 941 aaPredicted RBP15.32■□□□□ 0.04
CCDC78-213ENST00000482878 NCLP19338 710 aaKnown RBP15.32■□□□□ 0.04
CCDC78-213ENST00000482878 XPCQ01831 940 aaPredicted RBP15.31■□□□□ 0.04
CCDC78-213ENST00000482878 NME9Q86XW9 330 aa15.31■□□□□ 0.04
CCDC78-213ENST00000482878 SMAP1Q8IYB5 467 aaPredicted RBP15.31■□□□□ 0.04
CCDC78-213ENST00000482878 FAM83GA6ND36 823 aa15.31■□□□□ 0.04
CCDC78-213ENST00000482878 PREX1Q8TCU6 1659 aa15.31■□□□□ 0.04
CCDC78-213ENST00000482878 K7ELQ4 463 aaPredicted RBP15.31■□□□□ 0.04
CCDC78-213ENST00000482878 KIF20BQ96Q89 1820 aa15.3■□□□□ 0.04
CCDC78-213ENST00000482878 GSPT1P15170 499 aaKnown RBP15.3■□□□□ 0.04
CCDC78-213ENST00000482878 CFAP44Q96MT7 982 aa15.3■□□□□ 0.04
CCDC78-213ENST00000482878 DCTN1Q14203 1278 aa15.29■□□□□ 0.04
CCDC78-213ENST00000482878 ATP7BP35670 1465 aa15.29■□□□□ 0.04
CCDC78-213ENST00000482878 CEBPAP49715 358 aaPredicted RBP15.29■□□□□ 0.04
CCDC78-213ENST00000482878 GAS2L2Q8NHY3 880 aa15.29■□□□□ 0.04
CCDC78-213ENST00000482878 CDC45O75419 566 aa15.28■□□□□ 0.04
CCDC78-213ENST00000482878 RRS1Q15050 365 aaKnown RBP15.28■□□□□ 0.04
CCDC78-213ENST00000482878 NCKAP5LQ9HCH0 1330 aa15.28■□□□□ 0.04
CCDC78-213ENST00000482878 PLEKHM2Q8IWE5 1019 aa15.27■□□□□ 0.04
CCDC78-213ENST00000482878 API5Q9BZZ5 524 aaKnown RBP15.27■□□□□ 0.04
CCDC78-213ENST00000482878 GOLGA6L22H0YM25 854 aa15.27■□□□□ 0.04
CCDC78-213ENST00000482878 SSFA2P28290 1259 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms