RNA–Protein interactions for RNA: ENST00000482843.5

RAPGEF3-210, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 3,395 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-210ENST00000482843 BRPF3Q9ULD4 1205 aa15.15■□□□□ 0.02
RAPGEF3-210ENST00000482843 SIGLEC1Q9BZZ2 1709 aa15.15■□□□□ 0.02
RAPGEF3-210ENST00000482843 NINLQ9Y2I6 1382 aa15.15■□□□□ 0.02
RAPGEF3-210ENST00000482843 NFE2L2Q16236 605 aa15.15■□□□□ 0.02
RAPGEF3-210ENST00000482843 LMOD2Q6P5Q4 547 aa15.15■□□□□ 0.02
RAPGEF3-210ENST00000482843 PPLO60437 1756 aa15.14■□□□□ 0.01
RAPGEF3-210ENST00000482843 PIK3C2BO00750 1634 aa15.14■□□□□ 0.01
RAPGEF3-210ENST00000482843 MIS18AQ9NYP9 233 aa15.14■□□□□ 0.01
RAPGEF3-210ENST00000482843 AMPHP49418 695 aa15.13■□□□□ 0.01
RAPGEF3-210ENST00000482843 TMEM132AQ24JP5 1023 aa15.13■□□□□ 0.01
RAPGEF3-210ENST00000482843 LTKP29376 864 aa15.13■□□□□ 0.01
RAPGEF3-210ENST00000482843 MCM10Q7L590 875 aa15.13■□□□□ 0.01
RAPGEF3-210ENST00000482843 TNRQ92752 1358 aa15.12■□□□□ 0.01
RAPGEF3-210ENST00000482843 ANKRD45Q5TZF3 282 aa15.12■□□□□ 0.01
RAPGEF3-210ENST00000482843 TWISTNBQ3B726 338 aaPredicted RBP15.12■□□□□ 0.01
RAPGEF3-210ENST00000482843 HSP90AB2PQ58FF8 381 aa15.12■□□□□ 0.01
RAPGEF3-210ENST00000482843 PHF23Q9BUL5 403 aaPredicted RBP15.12■□□□□ 0.01
RAPGEF3-210ENST00000482843 ACEP12821 1306 aa15.12■□□□□ 0.01
RAPGEF3-210ENST00000482843 CALD1Q05682 793 aaKnown RBP15.11■□□□□ 0.01
RAPGEF3-210ENST00000482843 BECN1Q14457 450 aa15.11■□□□□ 0.01
RAPGEF3-210ENST00000482843 NECTIN2Q92692 538 aa15.11■□□□□ 0.01
RAPGEF3-210ENST00000482843 KIF16BQ96L93 1317 aa15.11■□□□□ 0.01
RAPGEF3-210ENST00000482843 GNAI1P63096 354 aa15.11■□□□□ 0.01
RAPGEF3-210ENST00000482843 KRT24Q2M2I5 525 aa15.11■□□□□ 0.01
RAPGEF3-210ENST00000482843 AMOTL2Q9Y2J4 779 aa15.11■□□□□ 0.01
RAPGEF3-210ENST00000482843 PTPRMP28827 1452 aa15.11■□□□□ 0.01
RAPGEF3-210ENST00000482843 SECISBP2LQ93073 1101 aaKnown RBP15.11■□□□□ 0.01
RAPGEF3-210ENST00000482843 MBIPQ9NS73 344 aa15.1■□□□□ 0.01
RAPGEF3-210ENST00000482843 ZFYVE9O95405 1425 aa15.1■□□□□ 0.01
RAPGEF3-210ENST00000482843 SLC4A10Q6U841 1118 aa15.1■□□□□ 0.01
RAPGEF3-210ENST00000482843 NEURL4Q96JN8 1562 aa15.1■□□□□ 0.01
RAPGEF3-210ENST00000482843 A2ML1A8K2U0 1454 aa15.09■□□□□ 0.01
RAPGEF3-210ENST00000482843 RTF1Q92541 710 aaKnown RBP15.09■□□□□ 0.01
RAPGEF3-210ENST00000482843 ALKQ9UM73 1620 aa15.09■□□□□ 0.01
RAPGEF3-210ENST00000482843 NLRP6P59044 892 aa15.09■□□□□ 0.01
RAPGEF3-210ENST00000482843 PLCD3Q8N3E9 789 aa15.09■□□□□ 0.01
RAPGEF3-210ENST00000482843 ZNF692Q9BU19 519 aaPredicted RBP15.09■□□□□ 0.01
RAPGEF3-210ENST00000482843 NFKBIBQ15653 356 aa15.08■□□□□ 0.01
RAPGEF3-210ENST00000482843 C8orf58Q8NAV2 365 aa15.08■□□□□ 0
RAPGEF3-210ENST00000482843 IFT172Q9UG01 1749 aa15.08■□□□□ 0
RAPGEF3-210ENST00000482843 IL13P35225 146 aa15.08■□□□□ 0
RAPGEF3-210ENST00000482843 BCCIPQ9P287 314 aaKnown RBP eCLIP15.08■□□□□ 0
RAPGEF3-210ENST00000482843 LMOD3Q0VAK6 560 aa15.07■□□□□ 0
RAPGEF3-210ENST00000482843 PRR36Q9H6K5 1346 aa15.07■□□□□ 0
RAPGEF3-210ENST00000482843 CCDC9Q9Y3X0 531 aaKnown RBP15.07■□□□□ 0
RAPGEF3-210ENST00000482843 CT47B1P0C2W7 299 aaPredicted RBP15.07■□□□□ 0
RAPGEF3-210ENST00000482843 FRAT2O75474 233 aaPredicted RBP15.06■□□□□ 0
RAPGEF3-210ENST00000482843 EIF4A2Q14240 407 aaKnown RBP15.05■□□□□ 0
RAPGEF3-210ENST00000482843 MYO5BQ9ULV0 1848 aa15.05■□□□□ 0
RAPGEF3-210ENST00000482843 TTC21BQ7Z4L5 1316 aa15.05■□□□□ 0
RAPGEF3-210ENST00000482843 RICTORQ6R327 1708 aa15.05■□□□□ 0
RAPGEF3-210ENST00000482843 RIMBP3CA6NJZ7 1639 aa15.05■□□□□ 0
RAPGEF3-210ENST00000482843 RIMBP3BA6NNM3 1639 aa15.05■□□□□ 0
RAPGEF3-210ENST00000482843 RIMBP3Q9UFD9 1639 aa15.05■□□□□ 0
RAPGEF3-210ENST00000482843 HSP90AA1P07900 732 aaKnown RBP15.05■□□□□ -0
RAPGEF3-210ENST00000482843 USP35Q9P2H5 1018 aa15.05■□□□□ -0
RAPGEF3-210ENST00000482843 FOXO3O43524 673 aa15.05■□□□□ -0
RAPGEF3-210ENST00000482843 VAMP4O75379 141 aa15.04■□□□□ -0
RAPGEF3-210ENST00000482843 ROBO2Q9HCK4 1378 aa15.04■□□□□ -0
RAPGEF3-210ENST00000482843 ARHGEF28Q8N1W1 1705 aaKnown RBP15.04■□□□□ -0
RAPGEF3-210ENST00000482843 ZC3H13Q5T200 1668 aaKnown RBP15.04■□□□□ -0
RAPGEF3-210ENST00000482843 PREX1Q8TCU6 1659 aa15.04■□□□□ -0
RAPGEF3-210ENST00000482843 TMEM131LA2VDJ0 1609 aa15.03■□□□□ -0
RAPGEF3-210ENST00000482843 MYO3AQ8NEV4 1616 aa15.03■□□□□ -0
RAPGEF3-210ENST00000482843 IL16Q14005 1332 aa15.03■□□□□ -0
RAPGEF3-210ENST00000482843 ARHGEF40Q8TER5 1519 aa15.03■□□□□ -0
RAPGEF3-210ENST00000482843 ABTB2Q8N961 1025 aa15.02■□□□□ -0
RAPGEF3-210ENST00000482843 CD163L1Q9NR16 1453 aa15.02■□□□□ -0
RAPGEF3-210ENST00000482843 TMEM2Q9UHN6 1383 aa15.02■□□□□ -0
RAPGEF3-210ENST00000482843 CLTCQ00610 1675 aaKnown RBP15.02□□□□□ -0.01
RAPGEF3-210ENST00000482843 FOXD4L1Q9NU39 408 aa15.02□□□□□ -0.01
RAPGEF3-210ENST00000482843 IFT57Q9NWB7 429 aa15.02□□□□□ -0.01
RAPGEF3-210ENST00000482843 ZBTB40Q9NUA8 1239 aa15.01□□□□□ -0.01
RAPGEF3-210ENST00000482843 TSPYL4Q9UJ04 414 aa15.01□□□□□ -0.01
RAPGEF3-210ENST00000482843 XPCQ01831 940 aaPredicted RBP15.01□□□□□ -0.01
RAPGEF3-210ENST00000482843 THEMISQ8N1K5 641 aaPredicted RBP15.01□□□□□ -0.01
RAPGEF3-210ENST00000482843 IQSEC2Q5JU85 1478 aa15.01□□□□□ -0.01
RAPGEF3-210ENST00000482843 USHBP1Q8N6Y0 703 aa15.01□□□□□ -0.01
RAPGEF3-210ENST00000482843 C22orf23Q9BZE7 217 aa15.01□□□□□ -0.01
RAPGEF3-210ENST00000482843 EDC4Q6P2E9 1401 aaKnown RBP15□□□□□ -0.01
RAPGEF3-210ENST00000482843 ALDH1L2Q3SY69 923 aa15□□□□□ -0.01
RAPGEF3-210ENST00000482843 IPO4Q8TEX9 1081 aaKnown RBP15□□□□□ -0.01
RAPGEF3-210ENST00000482843 SLC4A2P04920 1241 aa15□□□□□ -0.01
RAPGEF3-210ENST00000482843 DIP2BQ9P265 1576 aa14.99□□□□□ -0.01
RAPGEF3-210ENST00000482843 NCLP19338 710 aaKnown RBP14.99□□□□□ -0.01
RAPGEF3-210ENST00000482843 MRPL50Q8N5N7 158 aaKnown RBP14.99□□□□□ -0.01
RAPGEF3-210ENST00000482843 CHD1LQ86WJ1 897 aa14.99□□□□□ -0.01
RAPGEF3-210ENST00000482843 API5Q9BZZ5 524 aaKnown RBP14.99□□□□□ -0.01
RAPGEF3-210ENST00000482843 KCNA6P17658 529 aa14.98□□□□□ -0.01
RAPGEF3-210ENST00000482843 F6X3S4 739 aa14.98□□□□□ -0.01
RAPGEF3-210ENST00000482843 MAP3K19Q56UN5 1328 aa14.97□□□□□ -0.01
RAPGEF3-210ENST00000482843 PNPLA6Q8IY17 1366 aa14.96□□□□□ -0.01
RAPGEF3-210ENST00000482843 SHPRHQ149N8 1683 aa14.96□□□□□ -0.01
RAPGEF3-210ENST00000482843 ZNF526Q8TF50 670 aaPredicted RBP14.96□□□□□ -0.01
RAPGEF3-210ENST00000482843 GZF1Q9H116 711 aaPredicted RBP14.96□□□□□ -0.01
RAPGEF3-210ENST00000482843 HDAC1Q13547 482 aaPredicted RBP14.96□□□□□ -0.01
RAPGEF3-210ENST00000482843 ESCO1Q5FWF5 840 aa14.96□□□□□ -0.02
RAPGEF3-210ENST00000482843 ZNF592Q92610 1267 aa14.96□□□□□ -0.02
RAPGEF3-210ENST00000482843 ZBTB7BO15156 539 aaPredicted RBP14.95□□□□□ -0.02
RAPGEF3-210ENST00000482843 PSME1Q06323 249 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms