RNA–Protein interactions for RNA: ENST00000482462.1

PDGFA-206, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best)

Gene PDGFA, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-206ENST00000482462 HSPA1LP34931 641 aa24.86■■□□□ 1.57
PDGFA-206ENST00000482462 LTN1O94822 1766 aa24.86■■□□□ 1.57
PDGFA-206ENST00000482462 PEAK1Q9H792 1746 aa24.86■■□□□ 1.57
PDGFA-206ENST00000482462 USP19O94966 1318 aa24.86■■□□□ 1.57
PDGFA-206ENST00000482462 SPATA31A3Q5VYP0 1347 aa24.86■■□□□ 1.57
PDGFA-206ENST00000482462 KCNH5Q8NCM2 988 aa24.85■■□□□ 1.57
PDGFA-206ENST00000482462 ARHGEF10O15013 1369 aa24.85■■□□□ 1.57
PDGFA-206ENST00000482462 LMOD2Q6P5Q4 547 aa24.85■■□□□ 1.57
PDGFA-206ENST00000482462 AHDC1Q5TGY3 1603 aaPredicted RBP24.84■■□□□ 1.57
PDGFA-206ENST00000482462 PPM1GO15355 546 aaPredicted RBP24.84■■□□□ 1.57
PDGFA-206ENST00000482462 ADAMTS8Q9UP79 889 aa24.84■■□□□ 1.57
PDGFA-206ENST00000482462 KIF24Q5T7B8 1368 aa24.84■■□□□ 1.57
PDGFA-206ENST00000482462 MED1Q15648 1581 aaPredicted RBP24.83■■□□□ 1.57
PDGFA-206ENST00000482462 PHRF1Q9P1Y6 1649 aaKnown RBP24.83■■□□□ 1.56
PDGFA-206ENST00000482462 CRYBG1Q9Y4K1 1723 aa24.83■■□□□ 1.56
PDGFA-206ENST00000482462 SOX12O15370 315 aa24.82■■□□□ 1.56
PDGFA-206ENST00000482462 DIAPH1O60610 1272 aaKnown RBP24.82■■□□□ 1.56
PDGFA-206ENST00000482462 MAP3K19Q56UN5 1328 aa24.82■■□□□ 1.56
PDGFA-206ENST00000482462 FLT4P35916 1363 aa24.8■■□□□ 1.56
PDGFA-206ENST00000482462 ZBTB47Q9UFB7 747 aaPredicted RBP24.8■■□□□ 1.56
PDGFA-206ENST00000482462 RTL1A6NKG5 1358 aa24.78■■□□□ 1.56
PDGFA-206ENST00000482462 GCP02774 474 aa24.78■■□□□ 1.56
PDGFA-206ENST00000482462 AMPHP49418 695 aa24.76■■□□□ 1.55
PDGFA-206ENST00000482462 CDCA7LQ96GN5 454 aa24.75■■□□□ 1.55
PDGFA-206ENST00000482462 IL13P35225 146 aa24.75■■□□□ 1.55
PDGFA-206ENST00000482462 U2AF1L5P0DN76 240 aaPredicted RBP24.74■■□□□ 1.55
PDGFA-206ENST00000482462 U2AF1Q01081 240 aaKnown RBP eCLIP24.74■■□□□ 1.55
PDGFA-206ENST00000482462 BACH2Q9BYV9 841 aa24.74■■□□□ 1.55
PDGFA-206ENST00000482462 PHLPP1O60346 1717 aa24.74■■□□□ 1.55
PDGFA-206ENST00000482462 ABCA3Q99758 1704 aa24.74■■□□□ 1.55
PDGFA-206ENST00000482462 SENP3-EIF4A1A0A087X0R7 540 aa24.73■■□□□ 1.55
PDGFA-206ENST00000482462 U2SURPO15042 1029 aaKnown RBP24.73■■□□□ 1.55
PDGFA-206ENST00000482462 PDE4AP27815 886 aa24.72■■□□□ 1.55
PDGFA-206ENST00000482462 HOXC9P31274 260 aa24.72■■□□□ 1.55
PDGFA-206ENST00000482462 DEKP35659 375 aaKnown RBP24.72■■□□□ 1.55
PDGFA-206ENST00000482462 HSP90AB2PQ58FF8 381 aa24.72■■□□□ 1.55
PDGFA-206ENST00000482462 ARHGEF25Q86VW2 580 aa24.72■■□□□ 1.55
PDGFA-206ENST00000482462 RGPD1P0DJD0 1748 aa24.71■■□□□ 1.55
PDGFA-206ENST00000482462 ZNF521Q96K83 1311 aa24.7■■□□□ 1.55
PDGFA-206ENST00000482462 EIF4A2Q14240 407 aaKnown RBP24.7■■□□□ 1.55
PDGFA-206ENST00000482462 COL16A1Q07092 1604 aaPredicted RBP24.7■■□□□ 1.54
PDGFA-206ENST00000482462 IP6K1Q92551 441 aa24.7■■□□□ 1.54
PDGFA-206ENST00000482462 LRRC59Q96AG4 307 aaKnown RBP24.7■■□□□ 1.54
PDGFA-206ENST00000482462 ABCC6O95255 1503 aa24.68■■□□□ 1.54
PDGFA-206ENST00000482462 SALL2Q9Y467 1007 aaPredicted RBP24.68■■□□□ 1.54
PDGFA-206ENST00000482462 COL22A1Q8NFW1 1626 aaPredicted RBP24.67■■□□□ 1.54
PDGFA-206ENST00000482462 PLEKHG5O94827 1062 aa24.67■■□□□ 1.54
PDGFA-206ENST00000482462 CCDC146Q8IYE0 955 aa24.67■■□□□ 1.54
PDGFA-206ENST00000482462 RUNDC1Q96C34 613 aa24.67■■□□□ 1.54
PDGFA-206ENST00000482462 PNNQ9H307 717 aaKnown RBP24.67■■□□□ 1.54
PDGFA-206ENST00000482462 FCHSD2O94868 740 aa24.66■■□□□ 1.54
PDGFA-206ENST00000482462 CABLES1Q8TDN4 633 aa24.66■■□□□ 1.54
PDGFA-206ENST00000482462 COL18A1P39060 1754 aa24.65■■□□□ 1.54
PDGFA-206ENST00000482462 RGPD5Q99666 1765 aa24.65■■□□□ 1.54
PDGFA-206ENST00000482462 CPDO75976 1380 aa24.65■■□□□ 1.54
PDGFA-206ENST00000482462 CRBNQ96SW2 442 aa24.65■■□□□ 1.54
PDGFA-206ENST00000482462 ZC3H6P61129 1189 aaKnown RBP24.64■■□□□ 1.53
PDGFA-206ENST00000482462 NGEFQ8N5V2 710 aa24.64■■□□□ 1.53
PDGFA-206ENST00000482462 KDM2BQ8NHM5 1336 aa24.63■■□□□ 1.53
PDGFA-206ENST00000482462 ZBTB7CA1YPR0 619 aa24.62■■□□□ 1.53
PDGFA-206ENST00000482462 RTL5Q5HYW3 569 aaPredicted RBP24.62■■□□□ 1.53
PDGFA-206ENST00000482462 DUSP27Q5VZP5 1158 aa24.62■■□□□ 1.53
PDGFA-206ENST00000482462 PLEKHF1Q96S99 279 aa24.62■■□□□ 1.53
PDGFA-206ENST00000482462 RSPH6AQ9H0K4 717 aa24.62■■□□□ 1.53
PDGFA-206ENST00000482462 APAF1O14727 1248 aa24.62■■□□□ 1.53
PDGFA-206ENST00000482462 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.61■■□□□ 1.53
PDGFA-206ENST00000482462 USP35Q9P2H5 1018 aa24.61■■□□□ 1.53
PDGFA-206ENST00000482462 HMOX1P09601 288 aa24.59■■□□□ 1.53
PDGFA-206ENST00000482462 GOLGA2Q08379 1002 aa24.59■■□□□ 1.53
PDGFA-206ENST00000482462 CENPQQ7L2Z9 268 aaPredicted RBP24.59■■□□□ 1.53
PDGFA-206ENST00000482462 IGSF1Q8N6C5 1336 aa24.59■■□□□ 1.53
PDGFA-206ENST00000482462 KIAA0232Q92628 1395 aa24.59■■□□□ 1.53
PDGFA-206ENST00000482462 HAP1P54257 671 aaPredicted RBP24.59■■□□□ 1.53
PDGFA-206ENST00000482462 NBR1Q14596 966 aa24.59■■□□□ 1.53
PDGFA-206ENST00000482462 DDRGK1Q96HY6 314 aa24.59■■□□□ 1.53
PDGFA-206ENST00000482462 MAPK8IP3Q9UPT6 1336 aa24.59■■□□□ 1.53
PDGFA-206ENST00000482462 ILDR2Q71H61 639 aa24.58■■□□□ 1.53
PDGFA-206ENST00000482462 TRMT2AQ8IZ69 625 aaKnown RBP24.58■■□□□ 1.53
PDGFA-206ENST00000482462 RGPD2P0DJD1 1756 aa24.58■■□□□ 1.52
PDGFA-206ENST00000482462 NEFMP07197 916 aa24.57■■□□□ 1.52
PDGFA-206ENST00000482462 PRKAR2BP31323 418 aa24.57■■□□□ 1.52
PDGFA-206ENST00000482462 NCBP3Q53F19 620 aaKnown RBP24.57■■□□□ 1.52
PDGFA-206ENST00000482462 TCP11L2Q8N4U5 519 aa24.57■■□□□ 1.52
PDGFA-206ENST00000482462 EYA1Q99502 592 aa24.57■■□□□ 1.52
PDGFA-206ENST00000482462 FAM208AQ9UK61 1670 aaKnown RBP24.57■■□□□ 1.52
PDGFA-206ENST00000482462 KDRP35968 1356 aa24.57■■□□□ 1.52
PDGFA-206ENST00000482462 PLIN1O60240 522 aa24.57■■□□□ 1.52
PDGFA-206ENST00000482462 SULT6B1Q6IMI4 303 aa24.57■■□□□ 1.52
PDGFA-206ENST00000482462 LTV1Q96GA3 475 aaPredicted RBP24.56■■□□□ 1.52
PDGFA-206ENST00000482462 LMO7Q8WWI1 1683 aa24.56■■□□□ 1.52
PDGFA-206ENST00000482462 CAMTA1Q9Y6Y1 1673 aa24.56■■□□□ 1.52
PDGFA-206ENST00000482462 AXIN2Q9Y2T1 843 aa24.55■■□□□ 1.52
PDGFA-206ENST00000482462 SLFN5Q08AF3 891 aa24.54■■□□□ 1.52
PDGFA-206ENST00000482462 ANKRD24Q8TF21 1146 aa24.54■■□□□ 1.52
PDGFA-206ENST00000482462 ERBB3P21860 1342 aa24.53■■□□□ 1.52
PDGFA-206ENST00000482462 AEBP1Q8IUX7 1158 aa24.53■■□□□ 1.52
PDGFA-206ENST00000482462 PRDM11Q9NQV5 511 aa24.53■■□□□ 1.52
PDGFA-206ENST00000482462 CHRNA2Q15822 529 aa24.52■■□□□ 1.52
PDGFA-206ENST00000482462 NCAPD2Q15021 1401 aa24.51■■□□□ 1.51
PDGFA-206ENST00000482462 DLG5Q8TDM6 1919 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms