RNA–Protein interactions for RNA: ENST00000482183.1

CAPN8-208, Transcript of calpain 8, humanhuman

TSL 2

Gene CAPN8, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-208ENST00000482183 TRIM27P14373 513 aa12.66□□□□□ -0.38
CAPN8-208ENST00000482183 VIRMAQ69YN4 1812 aaKnown RBP12.65□□□□□ -0.38
CAPN8-208ENST00000482183 ANKARQ7Z5J8 1434 aa12.65□□□□□ -0.38
CAPN8-208ENST00000482183 HTATSF1O43719 755 aaKnown RBP12.65□□□□□ -0.38
CAPN8-208ENST00000482183 PAK3O75914 559 aaPredicted RBP12.65□□□□□ -0.38
CAPN8-208ENST00000482183 SMC5Q8IY18 1101 aa12.65□□□□□ -0.38
CAPN8-208ENST00000482183 NOB1Q9ULX3 412 aaKnown RBP12.65□□□□□ -0.38
CAPN8-208ENST00000482183 LRRC7Q96NW7 1537 aa12.65□□□□□ -0.38
CAPN8-208ENST00000482183 IL27Q8NEV9 243 aa12.64□□□□□ -0.39
CAPN8-208ENST00000482183 ZBTB40Q9NUA8 1239 aa12.64□□□□□ -0.39
CAPN8-208ENST00000482183 BABAM1Q9NWV8 329 aa12.64□□□□□ -0.39
CAPN8-208ENST00000482183 PDZRN3Q9UPQ7 1066 aa12.64□□□□□ -0.39
CAPN8-208ENST00000482183 KIAA0232Q92628 1395 aa12.64□□□□□ -0.39
CAPN8-208ENST00000482183 ARHGAP23Q9P227 1491 aa12.64□□□□□ -0.39
CAPN8-208ENST00000482183 C3P01024 1663 aa12.64□□□□□ -0.39
CAPN8-208ENST00000482183 ADAMTS13Q76LX8 1427 aa12.63□□□□□ -0.39
CAPN8-208ENST00000482183 ZNF853P0CG23 659 aa12.63□□□□□ -0.39
CAPN8-208ENST00000482183 PCDHB15Q9Y5E8 787 aa12.63□□□□□ -0.39
CAPN8-208ENST00000482183 USP31Q70CQ4 1352 aa12.63□□□□□ -0.39
CAPN8-208ENST00000482183 PTPRCP08575 1304 aa12.62□□□□□ -0.39
CAPN8-208ENST00000482183 MAP2P11137 1827 aaKnown RBP12.62□□□□□ -0.39
CAPN8-208ENST00000482183 ARHGEF10O15013 1369 aa12.62□□□□□ -0.39
CAPN8-208ENST00000482183 NBR1Q14596 966 aa12.62□□□□□ -0.39
CAPN8-208ENST00000482183 TSR2Q969E8 191 aaKnown RBP12.62□□□□□ -0.39
CAPN8-208ENST00000482183 USP6P35125 1406 aa12.62□□□□□ -0.39
CAPN8-208ENST00000482183 NRKQ7Z2Y5 1582 aa12.61□□□□□ -0.39
CAPN8-208ENST00000482183 VAMP4O75379 141 aa12.61□□□□□ -0.39
CAPN8-208ENST00000482183 TWISTNBQ3B726 338 aaPredicted RBP12.61□□□□□ -0.39
CAPN8-208ENST00000482183 NME9Q86XW9 330 aa12.61□□□□□ -0.39
CAPN8-208ENST00000482183 GAS2L2Q8NHY3 880 aa12.61□□□□□ -0.39
CAPN8-208ENST00000482183 RTF1Q92541 710 aaKnown RBP12.61□□□□□ -0.39
CAPN8-208ENST00000482183 RLBP1P12271 317 aa12.6□□□□□ -0.39
CAPN8-208ENST00000482183 PTMSP20962 102 aa12.6□□□□□ -0.39
CAPN8-208ENST00000482183 DEKP35659 375 aaKnown RBP12.6□□□□□ -0.39
CAPN8-208ENST00000482183 BCL2L13Q9BXK5 485 aa12.6□□□□□ -0.39
CAPN8-208ENST00000482183 OVOS2A0A0J9YW53 1432 aa12.6□□□□□ -0.39
CAPN8-208ENST00000482183 OVOS2Q6IE36 1432 aa12.6□□□□□ -0.39
CAPN8-208ENST00000482183 ACEP12821 1306 aa12.6□□□□□ -0.39
CAPN8-208ENST00000482183 RTL1A6NKG5 1358 aa12.59□□□□□ -0.39
CAPN8-208ENST00000482183 FLT4P35916 1363 aa12.59□□□□□ -0.39
CAPN8-208ENST00000482183 ROBO2Q9HCK4 1378 aa12.59□□□□□ -0.39
CAPN8-208ENST00000482183 TOPAZ1Q8N9V7 1692 aa12.59□□□□□ -0.39
CAPN8-208ENST00000482183 NUCB1Q02818 461 aa12.59□□□□□ -0.39
CAPN8-208ENST00000482183 TMEM57Q8N5G2 664 aa12.59□□□□□ -0.39
CAPN8-208ENST00000482183 MRPL50Q8N5N7 158 aaKnown RBP12.59□□□□□ -0.39
CAPN8-208ENST00000482183 TBC1D32Q96NH3 1257 aa12.59□□□□□ -0.39
CAPN8-208ENST00000482183 LAS1LQ9Y4W2 734 aaKnown RBP12.59□□□□□ -0.39
CAPN8-208ENST00000482183 EMILIN1Q9Y6C2 1016 aa12.59□□□□□ -0.39
CAPN8-208ENST00000482183 PTPRUQ92729 1446 aa12.59□□□□□ -0.39
CAPN8-208ENST00000482183 SBNO1A3KN83 1393 aa12.58□□□□□ -0.4
CAPN8-208ENST00000482183 BMP2KLQ5H9B9 411 aa12.58□□□□□ -0.4
CAPN8-208ENST00000482183 RPAP2Q8IXW5 612 aaPredicted RBP12.58□□□□□ -0.4
CAPN8-208ENST00000482183 NGDNQ8NEJ9 315 aaKnown RBP12.58□□□□□ -0.4
CAPN8-208ENST00000482183 AMOTL2Q9Y2J4 779 aa12.58□□□□□ -0.4
CAPN8-208ENST00000482183 RIMS1Q86UR5 1692 aaKnown RBP12.57□□□□□ -0.4
CAPN8-208ENST00000482183 HMMRO75330 724 aa12.57□□□□□ -0.4
CAPN8-208ENST00000482183 HMOX1P09601 288 aa12.57□□□□□ -0.4
CAPN8-208ENST00000482183 CASC1Q6TDU7 716 aa12.57□□□□□ -0.4
CAPN8-208ENST00000482183 CHD1LQ86WJ1 897 aa12.57□□□□□ -0.4
CAPN8-208ENST00000482183 ABCC4O15439 1325 aa12.57□□□□□ -0.4
CAPN8-208ENST00000482183 ZBTB7BO15156 539 aaPredicted RBP12.56□□□□□ -0.4
CAPN8-208ENST00000482183 MBIPQ9NS73 344 aa12.56□□□□□ -0.4
CAPN8-208ENST00000482183 NALCNQ8IZF0 1738 aa12.55□□□□□ -0.4
CAPN8-208ENST00000482183 CHL1O00533 1208 aa12.55□□□□□ -0.4
CAPN8-208ENST00000482183 EIF4A2Q14240 407 aaKnown RBP12.55□□□□□ -0.4
CAPN8-208ENST00000482183 INTS3Q68E01 1043 aaKnown RBP12.55□□□□□ -0.4
CAPN8-208ENST00000482183 SSH2Q76I76 1423 aa12.54□□□□□ -0.4
CAPN8-208ENST00000482183 AMPHP49418 695 aa12.54□□□□□ -0.4
CAPN8-208ENST00000482183 SULT6B1Q6IMI4 303 aa12.54□□□□□ -0.4
CAPN8-208ENST00000482183 PHACTR3Q96KR7 559 aa12.54□□□□□ -0.4
CAPN8-208ENST00000482183 C22orf23Q9BZE7 217 aa12.54□□□□□ -0.4
CAPN8-208ENST00000482183 HDAC5Q9UQL6 1122 aa12.54□□□□□ -0.4
CAPN8-208ENST00000482183 PRR36Q9H6K5 1346 aa12.54□□□□□ -0.4
CAPN8-208ENST00000482183 LTKP29376 864 aa12.53□□□□□ -0.4
CAPN8-208ENST00000482183 CCT4P50991 539 aaKnown RBP12.53□□□□□ -0.4
CAPN8-208ENST00000482183 HSCBQ8IWL3 235 aa12.53□□□□□ -0.4
CAPN8-208ENST00000482183 KDRP35968 1356 aa12.53□□□□□ -0.4
CAPN8-208ENST00000482183 RRS1Q15050 365 aaKnown RBP12.52□□□□□ -0.41
CAPN8-208ENST00000482183 NFKBIBQ15653 356 aa12.52□□□□□ -0.41
CAPN8-208ENST00000482183 ANKLE2Q86XL3 938 aa12.52□□□□□ -0.41
CAPN8-208ENST00000482183 STK31Q9BXU1 1019 aa12.52□□□□□ -0.41
CAPN8-208ENST00000482183 FER1L4A9Z1Z3 1794 aa12.51□□□□□ -0.41
CAPN8-208ENST00000482183 RBM25P49756 843 aaKnown RBP12.51□□□□□ -0.41
CAPN8-208ENST00000482183 GSE1Q14687 1217 aa12.51□□□□□ -0.41
CAPN8-208ENST00000482183 KCNH5Q8NCM2 988 aa12.51□□□□□ -0.41
CAPN8-208ENST00000482183 SNX21Q969T3 373 aa12.51□□□□□ -0.41
CAPN8-208ENST00000482183 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.51□□□□□ -0.41
CAPN8-208ENST00000482183 KDM4FA0A1W2PPD8 638 aa12.5□□□□□ -0.41
CAPN8-208ENST00000482183 CIZ1Q9ULV3 898 aaPredicted RBP12.5□□□□□ -0.41
CAPN8-208ENST00000482183 USP54Q70EL1 1684 aa12.5□□□□□ -0.41
CAPN8-208ENST00000482183 ADGRL3Q9HAR2 1447 aa12.49□□□□□ -0.41
CAPN8-208ENST00000482183 USP19O94966 1318 aa12.49□□□□□ -0.41
CAPN8-208ENST00000482183 IGSF1Q8N6C5 1336 aa12.49□□□□□ -0.41
CAPN8-208ENST00000482183 GNAI3P08754 354 aa12.49□□□□□ -0.41
CAPN8-208ENST00000482183 ANKRD45Q5TZF3 282 aa12.49□□□□□ -0.41
CAPN8-208ENST00000482183 CCDC30Q5VVM6 783 aa12.49□□□□□ -0.41
CAPN8-208ENST00000482183 SENP3Q9H4L4 574 aaPredicted RBP12.49□□□□□ -0.41
CAPN8-208ENST00000482183 CHMP5Q9NZZ3 219 aa12.49□□□□□ -0.41
CAPN8-208ENST00000482183 XRN1Q8IZH2 1706 aaKnown RBP12.48□□□□□ -0.41
CAPN8-208ENST00000482183 HOXB7P09629 217 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms