RNA–Protein interactions for RNA: ENST00000481460.1

TRAPPC10-209, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-209ENST00000481460 TSPY10P0CW01 314 aa8.23□□□□□ -1.09
TRAPPC10-209ENST00000481460 PDE3BQ13370 1112 aa8.23□□□□□ -1.09
TRAPPC10-209ENST00000481460 GSE1Q14687 1217 aa8.23□□□□□ -1.09
TRAPPC10-209ENST00000481460 BARGINQ6ZT62 677 aa8.23□□□□□ -1.09
TRAPPC10-209ENST00000481460 SLC16A10Q8TF71 515 aa8.23□□□□□ -1.09
TRAPPC10-209ENST00000481460 METP08581 1390 aa8.22□□□□□ -1.09
TRAPPC10-209ENST00000481460 CCDC85CA6NKD9 419 aa8.22□□□□□ -1.09
TRAPPC10-209ENST00000481460 CTCFP49711 727 aaPredicted RBP8.22□□□□□ -1.09
TRAPPC10-209ENST00000481460 DUOX2Q9NRD8 1548 aa8.22□□□□□ -1.09
TRAPPC10-209ENST00000481460 HAP1P54257 671 aaPredicted RBP8.21□□□□□ -1.1
TRAPPC10-209ENST00000481460 FAM212AQ96EL1 285 aa8.21□□□□□ -1.1
TRAPPC10-209ENST00000481460 NMRK2Q9NPI5 230 aa8.21□□□□□ -1.1
TRAPPC10-209ENST00000481460 CCDC144AA2RUR9 1427 aa8.2□□□□□ -1.1
TRAPPC10-209ENST00000481460 TNS3Q68CZ2 1445 aa8.2□□□□□ -1.1
TRAPPC10-209ENST00000481460 C10orf71Q711Q0 1435 aa8.2□□□□□ -1.1
TRAPPC10-209ENST00000481460 ECM2O94769 699 aaPredicted RBP8.2□□□□□ -1.1
TRAPPC10-209ENST00000481460 POLD1P28340 1107 aa8.2□□□□□ -1.1
TRAPPC10-209ENST00000481460 TXNRD1Q16881 649 aa8.2□□□□□ -1.1
TRAPPC10-209ENST00000481460 QSER1Q2KHR3 1735 aa8.2□□□□□ -1.1
TRAPPC10-209ENST00000481460 PAPPAQ13219 1627 aa8.18□□□□□ -1.1
TRAPPC10-209ENST00000481460 TSPYL2Q9H2G4 693 aaPredicted RBP8.18□□□□□ -1.1
TRAPPC10-209ENST00000481460 CDC42BPGQ6DT37 1551 aa8.18□□□□□ -1.1
TRAPPC10-209ENST00000481460 CICQ96RK0 1608 aaPredicted RBP8.18□□□□□ -1.1
TRAPPC10-209ENST00000481460 TOPAZ1Q8N9V7 1692 aa8.18□□□□□ -1.1
TRAPPC10-209ENST00000481460 RGL2O15211 777 aa8.17□□□□□ -1.1
TRAPPC10-209ENST00000481460 CENPBP07199 599 aaPredicted RBP8.17□□□□□ -1.1
TRAPPC10-209ENST00000481460 KRT28Q7Z3Y7 464 aa8.17□□□□□ -1.1
TRAPPC10-209ENST00000481460 PXDNLA1KZ92 1463 aa8.17□□□□□ -1.1
TRAPPC10-209ENST00000481460 PARP4Q9UKK3 1724 aaKnown RBP8.17□□□□□ -1.1
TRAPPC10-209ENST00000481460 OVOS2A0A0G2JMS6 1433 aa8.16□□□□□ -1.1
TRAPPC10-209ENST00000481460 OVOS2A0A0J9YW53 1432 aa8.16□□□□□ -1.1
TRAPPC10-209ENST00000481460 SBNO1A3KN83 1393 aa8.16□□□□□ -1.1
TRAPPC10-209ENST00000481460 BCL9O00512 1426 aa8.16□□□□□ -1.1
TRAPPC10-209ENST00000481460 ARHGEF10O15013 1369 aa8.16□□□□□ -1.1
TRAPPC10-209ENST00000481460 CHRM1P11229 460 aaPredicted RBP8.16□□□□□ -1.1
TRAPPC10-209ENST00000481460 KIF1AQ12756 1690 aa8.16□□□□□ -1.1
TRAPPC10-209ENST00000481460 KANK1Q14678 1352 aa8.16□□□□□ -1.1
TRAPPC10-209ENST00000481460 OVOS2Q6IE36 1432 aa8.16□□□□□ -1.1
TRAPPC10-209ENST00000481460 PTF1AQ7RTS3 328 aa8.16□□□□□ -1.1
TRAPPC10-209ENST00000481460 C16orf71Q8IYS4 520 aaPredicted RBP8.16□□□□□ -1.1
TRAPPC10-209ENST00000481460 KIF15Q9NS87 1388 aa8.16□□□□□ -1.1
TRAPPC10-209ENST00000481460 HFM1A2PYH4 1435 aa8.15□□□□□ -1.1
TRAPPC10-209ENST00000481460 TECPR2O15040 1411 aa8.15□□□□□ -1.1
TRAPPC10-209ENST00000481460 ERBINQ96RT1 1412 aa8.15□□□□□ -1.1
TRAPPC10-209ENST00000481460 ROBO2Q9HCK4 1378 aa8.15□□□□□ -1.1
TRAPPC10-209ENST00000481460 LBX1P52954 281 aa8.15□□□□□ -1.1
TRAPPC10-209ENST00000481460 SMC1BQ8NDV3 1235 aa8.15□□□□□ -1.1
TRAPPC10-209ENST00000481460 GCC1Q96CN9 775 aa8.15□□□□□ -1.1
TRAPPC10-209ENST00000481460 CCDC61Q9Y6R9 512 aa8.15□□□□□ -1.1
TRAPPC10-209ENST00000481460 PHRF1Q9P1Y6 1649 aaKnown RBP8.14□□□□□ -1.11
TRAPPC10-209ENST00000481460 C19orf67A6NJJ6 358 aa8.14□□□□□ -1.11
TRAPPC10-209ENST00000481460 PMFBP1Q8TBY8 1022 aa8.14□□□□□ -1.11
TRAPPC10-209ENST00000481460 CD2APQ9Y5K6 639 aa8.14□□□□□ -1.11
TRAPPC10-209ENST00000481460 ATP7BP35670 1465 aa8.13□□□□□ -1.11
TRAPPC10-209ENST00000481460 PYGBP11216 843 aa8.13□□□□□ -1.11
TRAPPC10-209ENST00000481460 RNF25Q96BH1 459 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC10-209ENST00000481460 WBP1LQ9NX94 342 aa8.13□□□□□ -1.11
TRAPPC10-209ENST00000481460 IQGAP3Q86VI3 1631 aa8.13□□□□□ -1.11
TRAPPC10-209ENST00000481460 VIRMAQ69YN4 1812 aaKnown RBP8.13□□□□□ -1.11
TRAPPC10-209ENST00000481460 CD44P16070 742 aaKnown RBP8.12□□□□□ -1.11
TRAPPC10-209ENST00000481460 PSME1Q06323 249 aa8.12□□□□□ -1.11
TRAPPC10-209ENST00000481460 HSPA8P11142 646 aaKnown RBP8.11□□□□□ -1.11
TRAPPC10-209ENST00000481460 HABP4Q5JVS0 413 aaKnown RBP8.11□□□□□ -1.11
TRAPPC10-209ENST00000481460 AIDAQ96BJ3 306 aa8.11□□□□□ -1.11
TRAPPC10-209ENST00000481460 THRAP3Q9Y2W1 955 aaKnown RBP8.1□□□□□ -1.11
TRAPPC10-209ENST00000481460 CRYBG1Q9Y4K1 1723 aa8.09□□□□□ -1.11
TRAPPC10-209ENST00000481460 TNRC6CQ9HCJ0 1690 aaKnown RBP8.09□□□□□ -1.11
TRAPPC10-209ENST00000481460 PAK3O75914 559 aaPredicted RBP8.09□□□□□ -1.11
TRAPPC10-209ENST00000481460 ZNF827Q17R98 1081 aa8.09□□□□□ -1.11
TRAPPC10-209ENST00000481460 POTEHQ6S545 545 aa8.09□□□□□ -1.11
TRAPPC10-209ENST00000481460 TCP11L2Q8N4U5 519 aa8.09□□□□□ -1.11
TRAPPC10-209ENST00000481460 CEP162Q5TB80 1403 aa8.09□□□□□ -1.11
TRAPPC10-209ENST00000481460 SZT2Q5T011 3432 aa8.08□□□□□ -1.12
TRAPPC10-209ENST00000481460 EVX2Q03828 476 aa8.08□□□□□ -1.12
TRAPPC10-209ENST00000481460 BRD4O60885 1362 aaPredicted RBP8.08□□□□□ -1.12
TRAPPC10-209ENST00000481460 PNPLA7Q6ZV29 1317 aa8.07□□□□□ -1.12
TRAPPC10-209ENST00000481460 MPNDQ8N594 471 aa8.07□□□□□ -1.12
TRAPPC10-209ENST00000481460 KIF12Q96FN5 646 aa8.07□□□□□ -1.12
TRAPPC10-209ENST00000481460 TUBGCP6Q96RT7 1819 aa8.07□□□□□ -1.12
TRAPPC10-209ENST00000481460 ADAMTS7Q9UKP4 1686 aa8.07□□□□□ -1.12
TRAPPC10-209ENST00000481460 CACNA1AO00555 2505 aa8.06□□□□□ -1.12
TRAPPC10-209ENST00000481460 SSH2Q76I76 1423 aa8.06□□□□□ -1.12
TRAPPC10-209ENST00000481460 ALS2Q96Q42 1657 aa8.06□□□□□ -1.12
TRAPPC10-209ENST00000481460 FXR1P51114 621 aaKnown RBP eCLIP8.06□□□□□ -1.12
TRAPPC10-209ENST00000481460 USP35Q9P2H5 1018 aa8.06□□□□□ -1.12
TRAPPC10-209ENST00000481460 CNTNAP1P78357 1384 aa8.06□□□□□ -1.12
TRAPPC10-209ENST00000481460 FMN2Q9NZ56 1722 aa8.06□□□□□ -1.12
TRAPPC10-209ENST00000481460 RGPD8O14715 1765 aaPredicted RBP8.05□□□□□ -1.12
TRAPPC10-209ENST00000481460 HAX1O00165 279 aa8.05□□□□□ -1.12
TRAPPC10-209ENST00000481460 RIOK3O14730 519 aaKnown RBP8.05□□□□□ -1.12
TRAPPC10-209ENST00000481460 PRDM11Q9NQV5 511 aa8.05□□□□□ -1.12
TRAPPC10-209ENST00000481460 MKRN1Q9UHC7 482 aaKnown RBP8.05□□□□□ -1.12
TRAPPC10-209ENST00000481460 PLEKHG2Q9H7P9 1386 aa8.05□□□□□ -1.12
TRAPPC10-209ENST00000481460 KDM2BQ8NHM5 1336 aa8.04□□□□□ -1.12
TRAPPC10-209ENST00000481460 NAIPQ13075 1403 aa8.04□□□□□ -1.12
TRAPPC10-209ENST00000481460 TRPM3Q9HCF6 1732 aaPredicted RBP8.04□□□□□ -1.12
TRAPPC10-209ENST00000481460 MAP3K13O43283 966 aa8.04□□□□□ -1.12
TRAPPC10-209ENST00000481460 ZNF579Q8NAF0 562 aaKnown RBP8.04□□□□□ -1.12
TRAPPC10-209ENST00000481460 SLC17A8Q8NDX2 589 aa8.04□□□□□ -1.12
TRAPPC10-209ENST00000481460 PHF12Q96QT6 1004 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms