RNA–Protein interactions for RNA: ENST00000481419.1

AC006539.1-201, humanhuman

BASIC

Gene AC006539.1, Length 501 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006539.1-201ENST00000481419 CDC42BPGQ6DT37 1551 aa8.48□□□□□ -1.05
AC006539.1-201ENST00000481419 SBNO1A3KN83 1393 aa8.48□□□□□ -1.05
AC006539.1-201ENST00000481419 IQGAP3Q86VI3 1631 aa8.47□□□□□ -1.05
AC006539.1-201ENST00000481419 THRAP3Q9Y2W1 955 aaKnown RBP8.47□□□□□ -1.05
AC006539.1-201ENST00000481419 NRXN3Q9Y4C0 1643 aa8.47□□□□□ -1.05
AC006539.1-201ENST00000481419 C10orf71Q711Q0 1435 aa8.46□□□□□ -1.05
AC006539.1-201ENST00000481419 COL24A1Q17RW2 1714 aa8.46□□□□□ -1.05
AC006539.1-201ENST00000481419 NEUROD1Q13562 356 aa8.46□□□□□ -1.06
AC006539.1-201ENST00000481419 HABP4Q5JVS0 413 aaKnown RBP8.46□□□□□ -1.06
AC006539.1-201ENST00000481419 SLC4A1APQ9BWU0 796 aaKnown RBP8.46□□□□□ -1.06
AC006539.1-201ENST00000481419 NUP155O75694 1391 aa8.46□□□□□ -1.06
AC006539.1-201ENST00000481419 RRAGCQ9HB90 399 aa8.45□□□□□ -1.06
AC006539.1-201ENST00000481419 CREBZFQ9NS37 354 aa8.45□□□□□ -1.06
AC006539.1-201ENST00000481419 ANKRD30BQ9BXX2 1392 aa8.45□□□□□ -1.06
AC006539.1-201ENST00000481419 PLEKHG2Q9H7P9 1386 aa8.45□□□□□ -1.06
AC006539.1-201ENST00000481419 ROBO2Q9HCK4 1378 aa8.45□□□□□ -1.06
AC006539.1-201ENST00000481419 HSPA8P11142 646 aaKnown RBP8.44□□□□□ -1.06
AC006539.1-201ENST00000481419 WBP1LQ9NX94 342 aa8.44□□□□□ -1.06
AC006539.1-201ENST00000481419 TONSLQ96HA7 1378 aa8.44□□□□□ -1.06
AC006539.1-201ENST00000481419 PXDNLA1KZ92 1463 aa8.44□□□□□ -1.06
AC006539.1-201ENST00000481419 PARP4Q9UKK3 1724 aaKnown RBP8.43□□□□□ -1.06
AC006539.1-201ENST00000481419 PTF1AQ7RTS3 328 aa8.43□□□□□ -1.06
AC006539.1-201ENST00000481419 NBPF15Q8N660 670 aa8.43□□□□□ -1.06
AC006539.1-201ENST00000481419 TFCP2L1Q9NZI6 479 aa8.43□□□□□ -1.06
AC006539.1-201ENST00000481419 IGSF1Q8N6C5 1336 aa8.43□□□□□ -1.06
AC006539.1-201ENST00000481419 PEAK1Q9H792 1746 aa8.43□□□□□ -1.06
AC006539.1-201ENST00000481419 MSH5O43196 834 aa8.42□□□□□ -1.06
AC006539.1-201ENST00000481419 DDB1Q16531 1140 aa8.42□□□□□ -1.06
AC006539.1-201ENST00000481419 ZNF827Q17R98 1081 aa8.42□□□□□ -1.06
AC006539.1-201ENST00000481419 ATP7BP35670 1465 aa8.42□□□□□ -1.06
AC006539.1-201ENST00000481419 QSER1Q2KHR3 1735 aa8.41□□□□□ -1.06
AC006539.1-201ENST00000481419 TNRC6CQ9HCJ0 1690 aaKnown RBP8.41□□□□□ -1.06
AC006539.1-201ENST00000481419 BRD4O60885 1362 aaPredicted RBP8.41□□□□□ -1.06
AC006539.1-201ENST00000481419 ZNF316A6NFI3 1004 aaPredicted RBP8.41□□□□□ -1.06
AC006539.1-201ENST00000481419 MAP2K1Q02750 393 aaPredicted RBP8.41□□□□□ -1.06
AC006539.1-201ENST00000481419 ZNF326Q5BKZ1 582 aaKnown RBP8.41□□□□□ -1.06
AC006539.1-201ENST00000481419 BEGAINQ9BUH8 593 aa8.41□□□□□ -1.06
AC006539.1-201ENST00000481419 PHF8Q9UPP1 1060 aa8.41□□□□□ -1.06
AC006539.1-201ENST00000481419 SSH2Q76I76 1423 aa8.4□□□□□ -1.06
AC006539.1-201ENST00000481419 CNTNAP1P78357 1384 aa8.4□□□□□ -1.06
AC006539.1-201ENST00000481419 E9PCH4 1651 aa8.4□□□□□ -1.07
AC006539.1-201ENST00000481419 PAPPAQ13219 1627 aa8.4□□□□□ -1.07
AC006539.1-201ENST00000481419 CICQ96RK0 1608 aaPredicted RBP8.4□□□□□ -1.07
AC006539.1-201ENST00000481419 KCPQ6ZWJ8 1503 aa8.39□□□□□ -1.07
AC006539.1-201ENST00000481419 PNPLA7Q6ZV29 1317 aa8.39□□□□□ -1.07
AC006539.1-201ENST00000481419 CHRNA2Q15822 529 aa8.39□□□□□ -1.07
AC006539.1-201ENST00000481419 MCOLN1Q9GZU1 580 aa8.39□□□□□ -1.07
AC006539.1-201ENST00000481419 LARP1Q6PKG0 1096 aaKnown RBP8.38□□□□□ -1.07
AC006539.1-201ENST00000481419 ARHGAP27Q6ZUM4 889 aa8.38□□□□□ -1.07
AC006539.1-201ENST00000481419 ZNF219Q9P2Y4 722 aaPredicted RBP8.38□□□□□ -1.07
AC006539.1-201ENST00000481419 KIAA0232Q92628 1395 aa8.37□□□□□ -1.07
AC006539.1-201ENST00000481419 AKT1S1Q96B36 256 aa8.37□□□□□ -1.07
AC006539.1-201ENST00000481419 HIRIP3Q9BW71 556 aaPredicted RBP8.37□□□□□ -1.07
AC006539.1-201ENST00000481419 BCL9O00512 1426 aa8.37□□□□□ -1.07
AC006539.1-201ENST00000481419 AKAP12Q02952 1782 aa8.36□□□□□ -1.07
AC006539.1-201ENST00000481419 VEGFAP15692 232 aaPredicted RBP8.36□□□□□ -1.07
AC006539.1-201ENST00000481419 VEGFBP49765 207 aa8.36□□□□□ -1.07
AC006539.1-201ENST00000481419 FXR1P51114 621 aaKnown RBP eCLIP8.36□□□□□ -1.07
AC006539.1-201ENST00000481419 SOX10P56693 466 aa8.36□□□□□ -1.07
AC006539.1-201ENST00000481419 C9orf131Q5VYM1 1079 aa8.36□□□□□ -1.07
AC006539.1-201ENST00000481419 MNX1P50219 401 aaPredicted RBP8.35□□□□□ -1.07
AC006539.1-201ENST00000481419 L3MBTL2Q969R5 705 aa8.35□□□□□ -1.07
AC006539.1-201ENST00000481419 SLC27A3Q5K4L6 730 aa8.34□□□□□ -1.07
AC006539.1-201ENST00000481419 MSL1Q68DK7 614 aa8.34□□□□□ -1.07
AC006539.1-201ENST00000481419 FMN2Q9NZ56 1722 aa8.34□□□□□ -1.07
AC006539.1-201ENST00000481419 GPRASP1Q5JY77 1395 aa8.34□□□□□ -1.07
AC006539.1-201ENST00000481419 NRXN1Q9ULB1 1477 aa8.33□□□□□ -1.08
AC006539.1-201ENST00000481419 LRRC37A3O60309 1634 aa8.33□□□□□ -1.08
AC006539.1-201ENST00000481419 PHRF1Q9P1Y6 1649 aaKnown RBP8.33□□□□□ -1.08
AC006539.1-201ENST00000481419 CACNA1AO00555 2505 aa8.33□□□□□ -1.08
AC006539.1-201ENST00000481419 ZC3H6P61129 1189 aaKnown RBP8.33□□□□□ -1.08
AC006539.1-201ENST00000481419 DGKZQ13574 1117 aa8.33□□□□□ -1.08
AC006539.1-201ENST00000481419 MARCH10Q8NA82 808 aaPredicted RBP8.33□□□□□ -1.08
AC006539.1-201ENST00000481419 BCS1LQ9Y276 419 aa8.33□□□□□ -1.08
AC006539.1-201ENST00000481419 KIF1BO60333 1816 aa8.33□□□□□ -1.08
AC006539.1-201ENST00000481419 VIRMAQ69YN4 1812 aaKnown RBP8.33□□□□□ -1.08
AC006539.1-201ENST00000481419 PKD1L3Q7Z443 1732 aa8.32□□□□□ -1.08
AC006539.1-201ENST00000481419 PAK3O75914 559 aaPredicted RBP8.32□□□□□ -1.08
AC006539.1-201ENST00000481419 CDCA7Q9BWT1 371 aaPredicted RBP8.32□□□□□ -1.08
AC006539.1-201ENST00000481419 CLTCL1P53675 1640 aa8.32□□□□□ -1.08
AC006539.1-201ENST00000481419 KAT6BQ8WYB5 2073 aa8.31□□□□□ -1.08
AC006539.1-201ENST00000481419 DIEXFQ68CQ4 756 aaKnown RBP8.31□□□□□ -1.08
AC006539.1-201ENST00000481419 LRRC4BQ9NT99 713 aa8.31□□□□□ -1.08
AC006539.1-201ENST00000481419 RNF181Q9P0P0 153 aa8.31□□□□□ -1.08
AC006539.1-201ENST00000481419 SZT2Q5T011 3432 aa8.31□□□□□ -1.08
AC006539.1-201ENST00000481419 RGPD8O14715 1765 aaPredicted RBP8.3□□□□□ -1.08
AC006539.1-201ENST00000481419 PIK3C2AO00443 1686 aa8.3□□□□□ -1.08
AC006539.1-201ENST00000481419 ALS2Q96Q42 1657 aa8.3□□□□□ -1.08
AC006539.1-201ENST00000481419 CRB1P82279 1406 aa8.29□□□□□ -1.08
AC006539.1-201ENST00000481419 TUBGCP6Q96RT7 1819 aa8.29□□□□□ -1.08
AC006539.1-201ENST00000481419 TRPM1Q7Z4N2 1603 aa8.29□□□□□ -1.08
AC006539.1-201ENST00000481419 TMEM88BA6NKF7 163 aa8.28□□□□□ -1.08
AC006539.1-201ENST00000481419 IFT172Q9UG01 1749 aa8.28□□□□□ -1.08
AC006539.1-201ENST00000481419 CRYBG1Q9Y4K1 1723 aa8.28□□□□□ -1.08
AC006539.1-201ENST00000481419 SPATA31E1Q6ZUB1 1445 aa8.28□□□□□ -1.08
AC006539.1-201ENST00000481419 NHSQ6T4R5 1651 aa8.27□□□□□ -1.08
AC006539.1-201ENST00000481419 TRPM3Q9HCF6 1732 aaPredicted RBP8.27□□□□□ -1.09
AC006539.1-201ENST00000481419 EXOC5O00471 708 aa8.27□□□□□ -1.09
AC006539.1-201ENST00000481419 VGFO15240 615 aaPredicted RBP8.27□□□□□ -1.09
AC006539.1-201ENST00000481419 DEFB115Q30KQ5 88 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms