RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 NPHP4O75161 1426 aaPredicted RBP23.88■■□□□ 1.41
CCM2-214ENST00000481194 ARHGEF40Q8TER5 1519 aa23.87■■□□□ 1.41
CCM2-214ENST00000481194 BTBD11A6QL63 1104 aa23.87■■□□□ 1.41
CCM2-214ENST00000481194 HSPA2P54652 639 aa23.87■■□□□ 1.41
CCM2-214ENST00000481194 UBTFL1P0CB47 393 aaPredicted RBP23.86■■□□□ 1.41
CCM2-214ENST00000481194 ADGRB3O60242 1522 aa23.86■■□□□ 1.41
CCM2-214ENST00000481194 ALDH1L2Q3SY69 923 aa23.86■■□□□ 1.41
CCM2-214ENST00000481194 ABCA6Q8N139 1617 aa23.86■■□□□ 1.41
CCM2-214ENST00000481194 CEP152O94986 1710 aa23.86■■□□□ 1.41
CCM2-214ENST00000481194 PER1O15534 1290 aaPredicted RBP23.86■■□□□ 1.41
CCM2-214ENST00000481194 KIF6Q6ZMV9 814 aa23.86■■□□□ 1.41
CCM2-214ENST00000481194 FAM135BQ49AJ0 1406 aa23.86■■□□□ 1.41
CCM2-214ENST00000481194 LRRFIP1Q32MZ4 808 aaKnown RBP23.86■■□□□ 1.41
CCM2-214ENST00000481194 PANK1Q8TE04 598 aa23.85■■□□□ 1.41
CCM2-214ENST00000481194 E9PCH4 1651 aa23.85■■□□□ 1.41
CCM2-214ENST00000481194 CARD14Q9BXL6 1004 aa23.85■■□□□ 1.41
CCM2-214ENST00000481194 TAF7Q15545 349 aaPredicted RBP23.83■■□□□ 1.41
CCM2-214ENST00000481194 NOB1Q9ULX3 412 aaKnown RBP23.83■■□□□ 1.41
CCM2-214ENST00000481194 PLEKHG3A1L390 1219 aa23.83■■□□□ 1.41
CCM2-214ENST00000481194 DDX54Q8TDD1 881 aaKnown RBP23.83■■□□□ 1.4
CCM2-214ENST00000481194 A2ML1A8K2U0 1454 aa23.82■■□□□ 1.4
CCM2-214ENST00000481194 G3BP1Q13283 466 aaKnown RBP eCLIP23.82■■□□□ 1.4
CCM2-214ENST00000481194 FAM161AQ3B820 660 aa23.82■■□□□ 1.4
CCM2-214ENST00000481194 ATF7IPQ6VMQ6 1270 aa23.82■■□□□ 1.4
CCM2-214ENST00000481194 ZMYM4Q5VZL5 1548 aa23.82■■□□□ 1.4
CCM2-214ENST00000481194 SLC4A2P04920 1241 aa23.82■■□□□ 1.4
CCM2-214ENST00000481194 ANKRD24Q8TF21 1146 aa23.82■■□□□ 1.4
CCM2-214ENST00000481194 CCDC27Q2M243 656 aa23.82■■□□□ 1.4
CCM2-214ENST00000481194 INSRP06213 1382 aa23.81■■□□□ 1.4
CCM2-214ENST00000481194 KIDINS220Q9ULH0 1771 aa23.81■■□□□ 1.4
CCM2-214ENST00000481194 HTATSF1O43719 755 aaKnown RBP23.81■■□□□ 1.4
CCM2-214ENST00000481194 NOP58Q9Y2X3 529 aaKnown RBP23.81■■□□□ 1.4
CCM2-214ENST00000481194 POLKQ9UBT6 870 aa23.8■■□□□ 1.4
CCM2-214ENST00000481194 AIMP1Q12904 312 aaKnown RBP23.79■■□□□ 1.4
CCM2-214ENST00000481194 RBM42Q9BTD8 480 aaKnown RBP23.79■■□□□ 1.4
CCM2-214ENST00000481194 PPRC1Q5VV67 1664 aaKnown RBP23.78■■□□□ 1.4
CCM2-214ENST00000481194 ATP7BP35670 1465 aa23.78■■□□□ 1.4
CCM2-214ENST00000481194 TRPM1Q7Z4N2 1603 aa23.78■■□□□ 1.4
CCM2-214ENST00000481194 IFIT2P09913 472 aaKnown RBP23.77■■□□□ 1.4
CCM2-214ENST00000481194 LAMC1P11047 1609 aa23.77■■□□□ 1.4
CCM2-214ENST00000481194 METP08581 1390 aa23.77■■□□□ 1.4
CCM2-214ENST00000481194 MVPQ14764 893 aaKnown RBP23.76■■□□□ 1.39
CCM2-214ENST00000481194 MFAP1P55081 439 aaKnown RBP23.76■■□□□ 1.39
CCM2-214ENST00000481194 BCAR3O75815 825 aa23.76■■□□□ 1.39
CCM2-214ENST00000481194 GNAI2P04899 355 aa23.76■■□□□ 1.39
CCM2-214ENST00000481194 GCC1Q96CN9 775 aa23.76■■□□□ 1.39
CCM2-214ENST00000481194 FANCIQ9NVI1 1328 aa23.76■■□□□ 1.39
CCM2-214ENST00000481194 RBM19Q9Y4C8 960 aaKnown RBP23.75■■□□□ 1.39
CCM2-214ENST00000481194 IFNL2Q8IZJ0 200 aa23.75■■□□□ 1.39
CCM2-214ENST00000481194 CLTCQ00610 1675 aaKnown RBP23.75■■□□□ 1.39
CCM2-214ENST00000481194 MCM10Q7L590 875 aa23.75■■□□□ 1.39
CCM2-214ENST00000481194 RUFY2Q8WXA3 655 aa23.74■■□□□ 1.39
CCM2-214ENST00000481194 SBNO1A3KN83 1393 aa23.74■■□□□ 1.39
CCM2-214ENST00000481194 SRCIN1Q9C0H9 1055 aa23.74■■□□□ 1.39
CCM2-214ENST00000481194 ARHGEF10O15013 1369 aa23.74■■□□□ 1.39
CCM2-214ENST00000481194 USHBP1Q8N6Y0 703 aa23.73■■□□□ 1.39
CCM2-214ENST00000481194 ERC2O15083 957 aa23.73■■□□□ 1.39
CCM2-214ENST00000481194 EIF4A2Q14240 407 aaKnown RBP23.73■■□□□ 1.39
CCM2-214ENST00000481194 DUSP27Q5VZP5 1158 aa23.73■■□□□ 1.39
CCM2-214ENST00000481194 ERC1Q8IUD2 1116 aa23.73■■□□□ 1.39
CCM2-214ENST00000481194 TMOD3Q9NYL9 352 aa23.73■■□□□ 1.39
CCM2-214ENST00000481194 SETBP1Q9Y6X0 1596 aa23.73■■□□□ 1.39
CCM2-214ENST00000481194 G3V3G9 751 aa23.72■■□□□ 1.39
CCM2-214ENST00000481194 DCAF8Q5TAQ9 597 aa23.72■■□□□ 1.39
CCM2-214ENST00000481194 PLEKHH1Q9ULM0 1364 aa23.72■■□□□ 1.39
CCM2-214ENST00000481194 LRRC59Q96AG4 307 aaKnown RBP23.72■■□□□ 1.39
CCM2-214ENST00000481194 LMTK3Q96Q04 1460 aa23.72■■□□□ 1.39
CCM2-214ENST00000481194 MADDQ8WXG6 1647 aa23.71■■□□□ 1.39
CCM2-214ENST00000481194 HSP90AB2PQ58FF8 381 aa23.71■■□□□ 1.39
CCM2-214ENST00000481194 NBR1Q14596 966 aa23.71■■□□□ 1.39
CCM2-214ENST00000481194 IP6K1Q92551 441 aa23.7■■□□□ 1.39
CCM2-214ENST00000481194 MSH5O43196 834 aa23.7■■□□□ 1.38
CCM2-214ENST00000481194 STARD3NLO95772 234 aa23.7■■□□□ 1.38
CCM2-214ENST00000481194 RARSP54136 660 aaKnown RBP23.69■■□□□ 1.38
CCM2-214ENST00000481194 NAP1L2Q9ULW6 460 aaPredicted RBP23.69■■□□□ 1.38
CCM2-214ENST00000481194 NCBP3Q53F19 620 aaKnown RBP23.69■■□□□ 1.38
CCM2-214ENST00000481194 UBAP1LF5GYI3 381 aa23.68■■□□□ 1.38
CCM2-214ENST00000481194 FRAT2O75474 233 aaPredicted RBP23.68■■□□□ 1.38
CCM2-214ENST00000481194 GCP02774 474 aa23.68■■□□□ 1.38
CCM2-214ENST00000481194 REC8O95072 547 aa23.68■■□□□ 1.38
CCM2-214ENST00000481194 EXOC5O00471 708 aa23.68■■□□□ 1.38
CCM2-214ENST00000481194 PDE4AP27815 886 aa23.68■■□□□ 1.38
CCM2-214ENST00000481194 RILPL2Q969X0 211 aa23.67■■□□□ 1.38
CCM2-214ENST00000481194 DIAPH3Q9NSV4 1193 aa23.67■■□□□ 1.38
CCM2-214ENST00000481194 PTPRCP08575 1304 aa23.67■■□□□ 1.38
CCM2-214ENST00000481194 HOXC9P31274 260 aa23.67■■□□□ 1.38
CCM2-214ENST00000481194 PTMSP20962 102 aa23.66■■□□□ 1.38
CCM2-214ENST00000481194 CHMP4CQ96CF2 233 aa23.66■■□□□ 1.38
CCM2-214ENST00000481194 ADAMTS2O95450 1211 aa23.66■■□□□ 1.38
CCM2-214ENST00000481194 ZRANB1Q9UGI0 708 aa23.66■■□□□ 1.38
CCM2-214ENST00000481194 AKAP4Q5JQC9 854 aa23.66■■□□□ 1.38
CCM2-214ENST00000481194 THUMPD2Q9BTF0 503 aaKnown RBP23.66■■□□□ 1.38
CCM2-214ENST00000481194 TEX13AQ9BXU3 409 aaPredicted RBP23.66■■□□□ 1.38
CCM2-214ENST00000481194 ALKQ9UM73 1620 aa23.66■■□□□ 1.38
CCM2-214ENST00000481194 NGLY1Q96IV0 654 aa23.65■■□□□ 1.38
CCM2-214ENST00000481194 ST18O60284 1047 aa23.65■■□□□ 1.38
CCM2-214ENST00000481194 ANKARQ7Z5J8 1434 aa23.64■■□□□ 1.38
CCM2-214ENST00000481194 DCTN1Q14203 1278 aa23.64■■□□□ 1.38
CCM2-214ENST00000481194 FMNL2Q96PY5 1086 aa23.64■■□□□ 1.38
CCM2-214ENST00000481194 MAP3K19Q56UN5 1328 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms