RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 NLRP2Q9NX02 1062 aa11.12□□□□□ -0.63
LSM5-210ENST00000480956 EGFL7Q9UHF1 273 aa11.12□□□□□ -0.63
LSM5-210ENST00000480956 AXIN2Q9Y2T1 843 aa11.12□□□□□ -0.63
LSM5-210ENST00000480956 ABL1P00519 1130 aa11.11□□□□□ -0.63
LSM5-210ENST00000480956 NEFLP07196 543 aa11.11□□□□□ -0.63
LSM5-210ENST00000480956 TYW1BQ6NUM6 668 aa11.11□□□□□ -0.63
LSM5-210ENST00000480956 KRTAP3-3Q9BYR6 98 aa11.11□□□□□ -0.63
LSM5-210ENST00000480956 KRTAP3-2Q9BYR7 98 aa11.11□□□□□ -0.63
LSM5-210ENST00000480956 PPP4R3BQ5MIZ7 849 aa11.1□□□□□ -0.63
LSM5-210ENST00000480956 HELBQ8NG08 1087 aaPredicted RBP11.1□□□□□ -0.63
LSM5-210ENST00000480956 LRRN4Q8WUT4 740 aa11.1□□□□□ -0.63
LSM5-210ENST00000480956 BCL2L12Q9HB09 334 aa11.1□□□□□ -0.63
LSM5-210ENST00000480956 MAGEC2Q9UBF1 373 aaPredicted RBP11.1□□□□□ -0.63
LSM5-210ENST00000480956 DCTN4Q9UJW0 460 aa11.1□□□□□ -0.63
LSM5-210ENST00000480956 PSEN2P49810 448 aa11.09□□□□□ -0.63
LSM5-210ENST00000480956 PSME1Q06323 249 aa11.09□□□□□ -0.63
LSM5-210ENST00000480956 SULF1Q8IWU6 871 aa11.09□□□□□ -0.63
LSM5-210ENST00000480956 NFATC2IPQ8NCF5 419 aa11.09□□□□□ -0.63
LSM5-210ENST00000480956 PIF1Q9H611 641 aa11.09□□□□□ -0.63
LSM5-210ENST00000480956 PSDA5PKW4 1024 aaPredicted RBP11.09□□□□□ -0.63
LSM5-210ENST00000480956 PIK3CDO00329 1044 aa11.09□□□□□ -0.63
LSM5-210ENST00000480956 PARNO95453 639 aaKnown RBP11.09□□□□□ -0.63
LSM5-210ENST00000480956 LARP1Q6PKG0 1096 aaKnown RBP11.09□□□□□ -0.63
LSM5-210ENST00000480956 GLYCTKQ8IVS8 523 aa11.09□□□□□ -0.63
LSM5-210ENST00000480956 NLGN1Q8N2Q7 840 aa11.09□□□□□ -0.63
LSM5-210ENST00000480956 C1orf216Q8TAB5 229 aa11.09□□□□□ -0.63
LSM5-210ENST00000480956 CAPN10Q9HC96 672 aa11.09□□□□□ -0.63
LSM5-210ENST00000480956 PEX14O75381 377 aa11.08□□□□□ -0.64
LSM5-210ENST00000480956 COL9A1P20849 921 aa11.08□□□□□ -0.64
LSM5-210ENST00000480956 PLEKHM2Q8IWE5 1019 aa11.08□□□□□ -0.64
LSM5-210ENST00000480956 PMFBP1Q8TBY8 1022 aa11.08□□□□□ -0.64
LSM5-210ENST00000480956 EPS8L1Q8TE68 723 aa11.08□□□□□ -0.64
LSM5-210ENST00000480956 ZSWIM4Q9H7M6 989 aa11.08□□□□□ -0.64
LSM5-210ENST00000480956 CCSER2Q9H7U1 834 aa11.08□□□□□ -0.64
LSM5-210ENST00000480956 NOP58Q9Y2X3 529 aaKnown RBP11.08□□□□□ -0.64
LSM5-210ENST00000480956 USP17L5A8MUK1 530 aa11.07□□□□□ -0.64
LSM5-210ENST00000480956 MAP4K4O95819 1239 aaPredicted RBP11.07□□□□□ -0.64
LSM5-210ENST00000480956 C6orf132Q5T0Z8 1188 aa11.07□□□□□ -0.64
LSM5-210ENST00000480956 ZCRB1Q8TBF4 217 aaKnown RBP11.07□□□□□ -0.64
LSM5-210ENST00000480956 MCCD1P59942 119 aaPredicted RBP11.06□□□□□ -0.64
LSM5-210ENST00000480956 PTK7Q13308 1070 aa11.06□□□□□ -0.64
LSM5-210ENST00000480956 ZNF211Q13398 564 aaPredicted RBP11.06□□□□□ -0.64
LSM5-210ENST00000480956 HSP90AB2PQ58FF8 381 aa11.06□□□□□ -0.64
LSM5-210ENST00000480956 DMRTA1Q5VZB9 504 aa11.06□□□□□ -0.64
LSM5-210ENST00000480956 CERKQ8TCT0 537 aa11.06□□□□□ -0.64
LSM5-210ENST00000480956 TSC1Q92574 1164 aa11.06□□□□□ -0.64
LSM5-210ENST00000480956 TGIF2Q9GZN2 237 aa11.06□□□□□ -0.64
LSM5-210ENST00000480956 SKIP12755 728 aa11.06□□□□□ -0.64
LSM5-210ENST00000480956 SWI5Q1ZZU3 235 aa11.06□□□□□ -0.64
LSM5-210ENST00000480956 HSP90AB4PQ58FF6 505 aa11.06□□□□□ -0.64
LSM5-210ENST00000480956 METTL16Q86W50 562 aaKnown RBP11.06□□□□□ -0.64
LSM5-210ENST00000480956 TEX2Q8IWB9 1127 aa11.06□□□□□ -0.64
LSM5-210ENST00000480956 CDAN1Q8IWY9 1227 aa11.06□□□□□ -0.64
LSM5-210ENST00000480956 TMEM87AQ8NBN3 555 aa11.06□□□□□ -0.64
LSM5-210ENST00000480956 BRINP2Q9C0B6 783 aa11.06□□□□□ -0.64
LSM5-210ENST00000480956 MKRN1Q9UHC7 482 aaKnown RBP11.06□□□□□ -0.64
LSM5-210ENST00000480956 PPP1R3GB7ZBB8 358 aa11.05□□□□□ -0.64
LSM5-210ENST00000480956 ICMTO60725 284 aa11.05□□□□□ -0.64
LSM5-210ENST00000480956 RASA1P20936 1047 aa11.05□□□□□ -0.64
LSM5-210ENST00000480956 GNL2Q13823 731 aaKnown RBP11.05□□□□□ -0.64
LSM5-210ENST00000480956 TCEAL1Q15170 157 aa11.05□□□□□ -0.64
LSM5-210ENST00000480956 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.04□□□□□ -0.64
LSM5-210ENST00000480956 LDLRAD1Q5T700 205 aa11.04□□□□□ -0.64
LSM5-210ENST00000480956 ANO2Q9NQ90 1003 aa11.04□□□□□ -0.64
LSM5-210ENST00000480956 DDX11L8A8MPP1 907 aa11.04□□□□□ -0.64
LSM5-210ENST00000480956 CCDC194A0A1B0GVG4 234 aa11.03□□□□□ -0.64
LSM5-210ENST00000480956 RNF187Q5TA31 235 aaPredicted RBP11.03□□□□□ -0.64
LSM5-210ENST00000480956 ANKMY2Q8IV38 441 aa11.03□□□□□ -0.64
LSM5-210ENST00000480956 DEPDC4Q8N2C3 294 aa11.03□□□□□ -0.64
LSM5-210ENST00000480956 ARHGAP33O14559 1287 aa11.02□□□□□ -0.65
LSM5-210ENST00000480956 DNAJA1P31689 397 aaKnown RBP11.02□□□□□ -0.65
LSM5-210ENST00000480956 KCNK17Q96T54 332 aa11.02□□□□□ -0.65
LSM5-210ENST00000480956 SOGA3Q5TF21 947 aa11.01□□□□□ -0.65
LSM5-210ENST00000480956 RGL4Q8IZJ4 473 aa11.01□□□□□ -0.65
LSM5-210ENST00000480956 CHPF2Q9P2E5 772 aa11.01□□□□□ -0.65
LSM5-210ENST00000480956 FAN1Q9Y2M0 1017 aa11.01□□□□□ -0.65
LSM5-210ENST00000480956 RBL2Q08999 1139 aa11.01□□□□□ -0.65
LSM5-210ENST00000480956 TTC13Q8NBP0 860 aa11.01□□□□□ -0.65
LSM5-210ENST00000480956 RNF34Q969K3 372 aa11.01□□□□□ -0.65
LSM5-210ENST00000480956 ATP5J2-PTCD1G3V325 749 aa11□□□□□ -0.65
LSM5-210ENST00000480956 C21orf2O43822 256 aa11□□□□□ -0.65
LSM5-210ENST00000480956 SMC5Q8IY18 1101 aa11□□□□□ -0.65
LSM5-210ENST00000480956 GMLQ99445 158 aa11□□□□□ -0.65
LSM5-210ENST00000480956 FDX1P10109 184 aa10.99□□□□□ -0.65
LSM5-210ENST00000480956 PTPREP23469 700 aa10.99□□□□□ -0.65
LSM5-210ENST00000480956 ZNF746Q6NUN9 644 aaPredicted RBP10.99□□□□□ -0.65
LSM5-210ENST00000480956 RNF135Q8IUD6 432 aa10.99□□□□□ -0.65
LSM5-210ENST00000480956 SLF2Q8IX21 1173 aa10.99□□□□□ -0.65
LSM5-210ENST00000480956 METTL5Q9NRN9 209 aaKnown RBP10.99□□□□□ -0.65
LSM5-210ENST00000480956 RCCD1A6NED2 376 aa10.98□□□□□ -0.65
LSM5-210ENST00000480956 CENPBP07199 599 aaPredicted RBP10.98□□□□□ -0.65
LSM5-210ENST00000480956 OSBPL2Q9H1P3 480 aa10.98□□□□□ -0.65
LSM5-210ENST00000480956 ACBD3Q9H3P7 528 aa10.98□□□□□ -0.65
LSM5-210ENST00000480956 FAM198AQ9UFP1 575 aa10.98□□□□□ -0.65
LSM5-210ENST00000480956 HMGB1P1B2RPK0 211 aaPredicted RBP10.98□□□□□ -0.65
LSM5-210ENST00000480956 C3orf80F5H4A9 247 aa10.98□□□□□ -0.65
LSM5-210ENST00000480956 P4HBP07237 508 aaKnown RBP10.98□□□□□ -0.65
LSM5-210ENST00000480956 HSD3B2P26439 372 aa10.98□□□□□ -0.65
LSM5-210ENST00000480956 PBX2P40425 430 aa10.98□□□□□ -0.65
LSM5-210ENST00000480956 SETQ01105 290 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms