RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 MCCD1P59942 119 aaPredicted RBP10.79□□□□□ -0.68
CALD1-219ENST00000480638 NR5A1Q13285 461 aa10.79□□□□□ -0.68
CALD1-219ENST00000480638 NNTQ13423 1086 aa10.79□□□□□ -0.68
CALD1-219ENST00000480638 PKDCCQ504Y2 493 aa10.79□□□□□ -0.68
CALD1-219ENST00000480638 POM121CA8CG34 1229 aa10.78□□□□□ -0.68
CALD1-219ENST00000480638 DGAT1O75907 488 aa10.78□□□□□ -0.68
CALD1-219ENST00000480638 NR3C2P08235 984 aa10.77□□□□□ -0.69
CALD1-219ENST00000480638 SOX11P35716 441 aa10.77□□□□□ -0.69
CALD1-219ENST00000480638 C14orf37Q86TY3 774 aa10.77□□□□□ -0.69
CALD1-219ENST00000480638 HPS1Q92902 700 aa10.77□□□□□ -0.69
CALD1-219ENST00000480638 ESPNB1AK53 854 aa10.76□□□□□ -0.69
CALD1-219ENST00000480638 INTS6LQ5JSJ4 861 aaKnown RBP10.76□□□□□ -0.69
CALD1-219ENST00000480638 ZMYND15Q9H091 742 aa10.76□□□□□ -0.69
CALD1-219ENST00000480638 AVPP01185 164 aa10.75□□□□□ -0.69
CALD1-219ENST00000480638 TRAK2O60296 914 aa10.74□□□□□ -0.69
CALD1-219ENST00000480638 GIGYF1O75420 1035 aaPredicted RBP10.74□□□□□ -0.69
CALD1-219ENST00000480638 SEMA3FQ13275 785 aa10.74□□□□□ -0.69
CALD1-219ENST00000480638 CCDC116Q8IYX3 515 aa10.74□□□□□ -0.69
CALD1-219ENST00000480638 Q6ZNB5 142 aa10.73□□□□□ -0.69
CALD1-219ENST00000480638 SEPT12Q8IYM1 358 aa10.73□□□□□ -0.69
CALD1-219ENST00000480638 ALG2Q9H553 416 aa10.73□□□□□ -0.69
CALD1-219ENST00000480638 CEP126Q9P2H0 1117 aa10.73□□□□□ -0.69
CALD1-219ENST00000480638 RAB15P59190 212 aa10.72□□□□□ -0.69
CALD1-219ENST00000480638 ADAMTS19Q8TE59 1207 aa10.72□□□□□ -0.69
CALD1-219ENST00000480638 DHX9Q08211 1270 aaKnown RBP10.71□□□□□ -0.69
CALD1-219ENST00000480638 TIMP2P16035 220 aa10.7□□□□□ -0.7
CALD1-219ENST00000480638 WDR4P57081 412 aaKnown RBP10.7□□□□□ -0.7
CALD1-219ENST00000480638 MYT1Q01538 1121 aa10.7□□□□□ -0.7
CALD1-219ENST00000480638 PPP1R26Q5T8A7 1209 aaPredicted RBP10.7□□□□□ -0.7
CALD1-219ENST00000480638 KLF16Q9BXK1 252 aaPredicted RBP10.7□□□□□ -0.7
CALD1-219ENST00000480638 ERVH48-1M5A8F1 160 aa10.69□□□□□ -0.7
CALD1-219ENST00000480638 CTC1Q2NKJ3 1217 aa10.69□□□□□ -0.7
CALD1-219ENST00000480638 RNF20Q5VTR2 975 aa10.69□□□□□ -0.7
CALD1-219ENST00000480638 CRIPAKQ8N1N5 446 aa10.69□□□□□ -0.7
CALD1-219ENST00000480638 GLMNQ92990 594 aa10.69□□□□□ -0.7
CALD1-219ENST00000480638 ITPKCQ96DU7 683 aa10.69□□□□□ -0.7
CALD1-219ENST00000480638 EMILIN1Q9Y6C2 1016 aa10.69□□□□□ -0.7
CALD1-219ENST00000480638 SMCPP49901 116 aaPredicted RBP10.68□□□□□ -0.7
CALD1-219ENST00000480638 LCE2BO14633 110 aa10.67□□□□□ -0.7
CALD1-219ENST00000480638 ZIC2O95409 532 aaPredicted RBP10.67□□□□□ -0.7
CALD1-219ENST00000480638 SLFNL1Q499Z3 407 aa10.67□□□□□ -0.7
CALD1-219ENST00000480638 HDGFL1Q5TGJ6 251 aa10.67□□□□□ -0.7
CALD1-219ENST00000480638 ERICH6Q7L0X2 663 aa10.67□□□□□ -0.7
CALD1-219ENST00000480638 PHTF2Q8N3S3 785 aa10.67□□□□□ -0.7
CALD1-219ENST00000480638 ZFAND3Q9H8U3 227 aa10.67□□□□□ -0.7
CALD1-219ENST00000480638 TMPRSS4Q9NRS4 437 aa10.67□□□□□ -0.7
CALD1-219ENST00000480638 TIMELESSQ9UNS1 1208 aa10.67□□□□□ -0.7
CALD1-219ENST00000480638 ST8SIA5O15466 376 aa10.66□□□□□ -0.7
CALD1-219ENST00000480638 CCDC125Q86Z20 511 aa10.66□□□□□ -0.7
CALD1-219ENST00000480638 RNF135Q8IUD6 432 aa10.66□□□□□ -0.7
CALD1-219ENST00000480638 AAASQ9NRG9 546 aa10.66□□□□□ -0.7
CALD1-219ENST00000480638 PGPEP1Q9NXJ5 209 aa10.66□□□□□ -0.7
CALD1-219ENST00000480638 ZNF777Q9ULD5 760 aaPredicted RBP10.66□□□□□ -0.7
CALD1-219ENST00000480638 AXIN1O15169 862 aa10.65□□□□□ -0.7
CALD1-219ENST00000480638 CAPN5O15484 640 aaPredicted RBP10.65□□□□□ -0.7
CALD1-219ENST00000480638 ZNF784Q8NCA9 323 aaPredicted RBP10.65□□□□□ -0.7
CALD1-219ENST00000480638 CCDC85AQ96PX6 553 aaPredicted RBP10.65□□□□□ -0.7
CALD1-219ENST00000480638 PIK3CDO00329 1044 aa10.64□□□□□ -0.71
CALD1-219ENST00000480638 PCDHB11Q9Y5F2 797 aa10.64□□□□□ -0.71
CALD1-219ENST00000480638 TRAF7Q6Q0C0 670 aa10.63□□□□□ -0.71
CALD1-219ENST00000480638 CALR3Q96L12 384 aaKnown RBP10.63□□□□□ -0.71
CALD1-219ENST00000480638 UCN2Q96RP3 112 aa10.63□□□□□ -0.71
CALD1-219ENST00000480638 CHIC2Q9UKJ5 165 aa10.62□□□□□ -0.71
CALD1-219ENST00000480638 DOLKQ9UPQ8 538 aa10.62□□□□□ -0.71
CALD1-219ENST00000480638 LILRA1O75019 489 aa10.61□□□□□ -0.71
CALD1-219ENST00000480638 TSGA10IPQ3SY00 556 aa10.61□□□□□ -0.71
CALD1-219ENST00000480638 PLPP7Q8NBV4 271 aa10.61□□□□□ -0.71
CALD1-219ENST00000480638 CYLDQ9NQC7 956 aa10.61□□□□□ -0.71
CALD1-219ENST00000480638 ERVK-9P63128 1117 aa10.6□□□□□ -0.71
CALD1-219ENST00000480638 CBLBQ13191 982 aa10.6□□□□□ -0.71
CALD1-219ENST00000480638 MEIOBQ8N635 442 aa10.6□□□□□ -0.71
CALD1-219ENST00000480638 NFATC2IPQ8NCF5 419 aa10.6□□□□□ -0.71
CALD1-219ENST00000480638 CDCA7Q9BWT1 371 aaPredicted RBP10.6□□□□□ -0.71
CALD1-219ENST00000480638 SCTRP47872 440 aa10.59□□□□□ -0.71
CALD1-219ENST00000480638 CC2D2BQ6DHV5 1058 aa10.59□□□□□ -0.71
CALD1-219ENST00000480638 Q6ZVU0 165 aa10.59□□□□□ -0.71
CALD1-219ENST00000480638 TRIM52Q96A61 297 aa10.59□□□□□ -0.71
CALD1-219ENST00000480638 SKIP12755 728 aa10.58□□□□□ -0.72
CALD1-219ENST00000480638 BMP1P13497 986 aa10.58□□□□□ -0.72
CALD1-219ENST00000480638 MAP7D1Q3KQU3 841 aa10.58□□□□□ -0.72
CALD1-219ENST00000480638 DACH1Q9UI36 760 aa10.58□□□□□ -0.72
CALD1-219ENST00000480638 ADD1P35611 737 aaKnown RBP10.57□□□□□ -0.72
CALD1-219ENST00000480638 OXLD1Q5BKU9 147 aa10.57□□□□□ -0.72
CALD1-219ENST00000480638 TBC1D9Q6ZT07 1266 aa10.57□□□□□ -0.72
CALD1-219ENST00000480638 ATP13A2Q9NQ11 1180 aa10.57□□□□□ -0.72
CALD1-219ENST00000480638 ARID3CA6NKF2 412 aa10.56□□□□□ -0.72
CALD1-219ENST00000480638 ATP9BO43861 1147 aa10.56□□□□□ -0.72
CALD1-219ENST00000480638 TRIM46Q7Z4K8 759 aa10.56□□□□□ -0.72
CALD1-219ENST00000480638 USP17L5A8MUK1 530 aa10.55□□□□□ -0.72
CALD1-219ENST00000480638 ADH1AP07327 375 aa10.55□□□□□ -0.72
CALD1-219ENST00000480638 MRPL14Q6P1L8 145 aaKnown RBP10.55□□□□□ -0.72
CALD1-219ENST00000480638 LINC00528Q8N1L1 170 aa10.55□□□□□ -0.72
CALD1-219ENST00000480638 OSBPL3Q9H4L5 887 aa10.54□□□□□ -0.72
CALD1-219ENST00000480638 MYCP01106 439 aaPredicted RBP10.53□□□□□ -0.72
CALD1-219ENST00000480638 NCOA4Q13772 614 aa10.53□□□□□ -0.72
CALD1-219ENST00000480638 AGBL1Q96MI9 1066 aa10.53□□□□□ -0.72
CALD1-219ENST00000480638 PPP1R12CQ9BZL4 782 aa10.53□□□□□ -0.72
CALD1-219ENST00000480638 USP17L3A6NCW0 530 aa10.52□□□□□ -0.73
CALD1-219ENST00000480638 USP17L4A6NCW7 530 aa10.52□□□□□ -0.73
CALD1-219ENST00000480638 PALM3A6NDB9 673 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms