RNA–Protein interactions for RNA: ENST00000479739.6

SH3YL1-222, Transcript of SH3 and SYLF domain containing 1, human

TSL 2

Gene SH3YL1, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH3YL1-222	ENST00000479739	CENPQ	Q7L2Z9	268 aa	Predicted RBP	11.82	□□□□□ -0.52
SH3YL1-222	ENST00000479739	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	11.82	□□□□□ -0.52
SH3YL1-222	ENST00000479739	ZNF692	Q9BU19	519 aa	Predicted RBP	11.82	□□□□□ -0.52
SH3YL1-222	ENST00000479739	ATRN	O75882	1429 aa		11.81	□□□□□ -0.52
SH3YL1-222	ENST00000479739	USP19	O94966	1318 aa		11.81	□□□□□ -0.52
SH3YL1-222	ENST00000479739	SOCS7	O14512	581 aa		11.81	□□□□□ -0.52
SH3YL1-222	ENST00000479739	CDCA7L	Q96GN5	454 aa		11.81	□□□□□ -0.52
SH3YL1-222	ENST00000479739	USP21	Q9UK80	565 aa		11.81	□□□□□ -0.52
SH3YL1-222	ENST00000479739	CDK12	Q9NYV4	1490 aa	Predicted RBP	11.81	□□□□□ -0.52
SH3YL1-222	ENST00000479739	NRAP	Q86VF7	1730 aa		11.81	□□□□□ -0.52
SH3YL1-222	ENST00000479739	COL14A1	Q05707	1796 aa	Known RBP	11.81	□□□□□ -0.52
SH3YL1-222	ENST00000479739	CRBN	Q96SW2	442 aa		11.8	□□□□□ -0.52
SH3YL1-222	ENST00000479739	ABTB2	Q8N961	1025 aa		11.8	□□□□□ -0.52
SH3YL1-222	ENST00000479739	QTRT2	Q9H974	415 aa	Known RBP	11.8	□□□□□ -0.52
SH3YL1-222	ENST00000479739	SALL2	Q9Y467	1007 aa	Predicted RBP	11.8	□□□□□ -0.52
SH3YL1-222	ENST00000479739	NINL	Q9Y2I6	1382 aa		11.8	□□□□□ -0.52
SH3YL1-222	ENST00000479739	SLIT3	O75094	1523 aa		11.8	□□□□□ -0.52
SH3YL1-222	ENST00000479739	KDM2B	Q8NHM5	1336 aa		11.79	□□□□□ -0.52
SH3YL1-222	ENST00000479739	USP54	Q70EL1	1684 aa		11.79	□□□□□ -0.52
SH3YL1-222	ENST00000479739	SENP3-EIF4A1	A0A087X0R7	540 aa		11.79	□□□□□ -0.52
SH3YL1-222	ENST00000479739	HAP1	P54257	671 aa	Predicted RBP	11.79	□□□□□ -0.52
SH3YL1-222	ENST00000479739	PANK3	Q9H999	370 aa		11.79	□□□□□ -0.52
SH3YL1-222	ENST00000479739	TTC21B	Q7Z4L5	1316 aa		11.79	□□□□□ -0.52
SH3YL1-222	ENST00000479739	FAM83G	A6ND36	823 aa		11.79	□□□□□ -0.52
SH3YL1-222	ENST00000479739	CDCA8	Q53HL2	280 aa		11.79	□□□□□ -0.52
SH3YL1-222	ENST00000479739	SLC12A5	Q9H2X9	1139 aa		11.79	□□□□□ -0.52
SH3YL1-222	ENST00000479739	EP400	Q96L91	3159 aa		11.78	□□□□□ -0.52
SH3YL1-222	ENST00000479739	VIRMA	Q69YN4	1812 aa	Known RBP	11.78	□□□□□ -0.52
SH3YL1-222	ENST00000479739	PLEKHG5	O94827	1062 aa		11.78	□□□□□ -0.52
SH3YL1-222	ENST00000479739	RXRB	P28702	533 aa		11.78	□□□□□ -0.52
SH3YL1-222	ENST00000479739	CC2D1B	Q5T0F9	858 aa	Known RBP	11.78	□□□□□ -0.52
SH3YL1-222	ENST00000479739	NUTM2G	Q5VZR2	741 aa		11.78	□□□□□ -0.52
SH3YL1-222	ENST00000479739	TRPC5	Q9UL62	973 aa	Predicted RBP	11.78	□□□□□ -0.52
SH3YL1-222	ENST00000479739	LAS1L	Q9Y4W2	734 aa	Known RBP	11.78	□□□□□ -0.52
SH3YL1-222	ENST00000479739		A0A1W2PP64	1363 aa		11.78	□□□□□ -0.52
SH3YL1-222	ENST00000479739	TTC21A	Q8NDW8	1320 aa		11.78	□□□□□ -0.52
SH3YL1-222	ENST00000479739	MYOM1	P52179	1685 aa		11.78	□□□□□ -0.52
SH3YL1-222	ENST00000479739	RBM6	P78332	1123 aa	Known RBP	11.78	□□□□□ -0.52
SH3YL1-222	ENST00000479739	UNC5CL	Q8IV45	518 aa		11.78	□□□□□ -0.52
SH3YL1-222	ENST00000479739	FAM161A	Q3B820	660 aa		11.77	□□□□□ -0.53
SH3YL1-222	ENST00000479739	CPD	O75976	1380 aa		11.77	□□□□□ -0.53
SH3YL1-222	ENST00000479739	KIAA0232	Q92628	1395 aa		11.77	□□□□□ -0.53
SH3YL1-222	ENST00000479739	NPC1L1	Q9UHC9	1359 aa		11.77	□□□□□ -0.53
SH3YL1-222	ENST00000479739	GLI3	P10071	1580 aa		11.77	□□□□□ -0.53
SH3YL1-222	ENST00000479739	LMO7	Q8WWI1	1683 aa		11.77	□□□□□ -0.53
SH3YL1-222	ENST00000479739	RGS12	O14924	1447 aa		11.77	□□□□□ -0.53
SH3YL1-222	ENST00000479739	WDR43	Q15061	677 aa	Known RBP eCLIP	11.76	□□□□□ -0.53
SH3YL1-222	ENST00000479739	EDC4	Q6P2E9	1401 aa	Known RBP	11.76	□□□□□ -0.53
SH3YL1-222	ENST00000479739	PLIN1	O60240	522 aa		11.76	□□□□□ -0.53
SH3YL1-222	ENST00000479739	NGEF	Q8N5V2	710 aa		11.76	□□□□□ -0.53
SH3YL1-222	ENST00000479739	GC	P02774	474 aa		11.75	□□□□□ -0.53
SH3YL1-222	ENST00000479739	NLRP6	P59044	892 aa		11.75	□□□□□ -0.53
SH3YL1-222	ENST00000479739	ZNF521	Q96K83	1311 aa		11.75	□□□□□ -0.53
SH3YL1-222	ENST00000479739	USP31	Q70CQ4	1352 aa		11.75	□□□□□ -0.53
SH3YL1-222	ENST00000479739	GOLGA2	Q08379	1002 aa		11.75	□□□□□ -0.53
SH3YL1-222	ENST00000479739	DUSP27	Q5VZP5	1158 aa		11.75	□□□□□ -0.53
SH3YL1-222	ENST00000479739	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	11.75	□□□□□ -0.53
SH3YL1-222	ENST00000479739	TERF2IP	Q9NYB0	399 aa		11.75	□□□□□ -0.53
SH3YL1-222	ENST00000479739	KNSTRN	Q9Y448	316 aa		11.75	□□□□□ -0.53
SH3YL1-222	ENST00000479739	ANKRD36B	Q8N2N9	1353 aa		11.74	□□□□□ -0.53
SH3YL1-222	ENST00000479739	GSE1	Q14687	1217 aa		11.74	□□□□□ -0.53
SH3YL1-222	ENST00000479739	VPS72	Q15906	364 aa		11.74	□□□□□ -0.53
SH3YL1-222	ENST00000479739	GJD4	Q96KN9	370 aa	Predicted RBP	11.74	□□□□□ -0.53
SH3YL1-222	ENST00000479739	PRDM11	Q9NQV5	511 aa		11.74	□□□□□ -0.53
SH3YL1-222	ENST00000479739	BTG4	Q9NY30	223 aa		11.74	□□□□□ -0.53
SH3YL1-222	ENST00000479739	NFAT5	O94916	1531 aa		11.74	□□□□□ -0.53
SH3YL1-222	ENST00000479739	ADAMTS8	Q9UP79	889 aa		11.74	□□□□□ -0.53
SH3YL1-222	ENST00000479739	COL18A1	P39060	1754 aa		11.74	□□□□□ -0.53
SH3YL1-222	ENST00000479739	ZC3H6	P61129	1189 aa	Known RBP	11.73	□□□□□ -0.53
SH3YL1-222	ENST00000479739	CAMTA1	Q9Y6Y1	1673 aa		11.73	□□□□□ -0.53
SH3YL1-222	ENST00000479739	PPP2R1A	P30153	589 aa		11.72	□□□□□ -0.53
SH3YL1-222	ENST00000479739	OVOS2	A0A0J9YW53	1432 aa		11.72	□□□□□ -0.53
SH3YL1-222	ENST00000479739	OVOS2	Q6IE36	1432 aa		11.72	□□□□□ -0.53
SH3YL1-222	ENST00000479739	NFKBIB	Q15653	356 aa		11.72	□□□□□ -0.53
SH3YL1-222	ENST00000479739	CHRNA2	Q15822	529 aa		11.72	□□□□□ -0.53
SH3YL1-222	ENST00000479739	NME9	Q86XW9	330 aa		11.71	□□□□□ -0.53
SH3YL1-222	ENST00000479739	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	11.71	□□□□□ -0.53	5e-7	■■□□□ 11.4
SH3YL1-222	ENST00000479739	ZRANB1	Q9UGI0	708 aa		11.71	□□□□□ -0.54
SH3YL1-222	ENST00000479739	AATK	Q6ZMQ8	1374 aa		11.71	□□□□□ -0.54
SH3YL1-222	ENST00000479739	SLFN5	Q08AF3	891 aa		11.7	□□□□□ -0.54
SH3YL1-222	ENST00000479739	C8orf34	Q49A92	452 aa		11.7	□□□□□ -0.54
SH3YL1-222	ENST00000479739	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.7	□□□□□ -0.54
SH3YL1-222	ENST00000479739	TRMT2A	Q8IZ69	625 aa	Known RBP	11.7	□□□□□ -0.54
SH3YL1-222	ENST00000479739	ONECUT3	O60422	494 aa	Predicted RBP	11.7	□□□□□ -0.54
SH3YL1-222	ENST00000479739	ARHGEF25	Q86VW2	580 aa		11.7	□□□□□ -0.54
SH3YL1-222	ENST00000479739	KCNH5	Q8NCM2	988 aa		11.7	□□□□□ -0.54
SH3YL1-222	ENST00000479739	COL5A2	P05997	1499 aa	Predicted RBP	11.69	□□□□□ -0.54
SH3YL1-222	ENST00000479739	ABCC6	O95255	1503 aa		11.69	□□□□□ -0.54
SH3YL1-222	ENST00000479739	BRWD3	Q6RI45	1802 aa		11.69	□□□□□ -0.54
SH3YL1-222	ENST00000479739	C20orf194	Q5TEA3	1177 aa		11.69	□□□□□ -0.54
SH3YL1-222	ENST00000479739	SPATA31A5	Q5VU36	1347 aa		11.69	□□□□□ -0.54
SH3YL1-222	ENST00000479739	SPATA31A7	Q8IWB4	1347 aa		11.69	□□□□□ -0.54
SH3YL1-222	ENST00000479739	IL27	Q8NEV9	243 aa		11.69	□□□□□ -0.54
SH3YL1-222	ENST00000479739	LTN1	O94822	1766 aa		11.69	□□□□□ -0.54
SH3YL1-222	ENST00000479739	KIF20B	Q96Q89	1820 aa		11.68	□□□□□ -0.54
SH3YL1-222	ENST00000479739	RGPD5	Q99666	1765 aa		11.68	□□□□□ -0.54
SH3YL1-222	ENST00000479739	THSD7A	Q9UPZ6	1657 aa		11.68	□□□□□ -0.54
SH3YL1-222	ENST00000479739	PKNOX2	Q96KN3	472 aa		11.68	□□□□□ -0.54
SH3YL1-222	ENST00000479739	AAMP	Q13685	434 aa		11.67	□□□□□ -0.54
SH3YL1-222	ENST00000479739	SPATA31A1	Q5TZJ5	1347 aa		11.67	□□□□□ -0.54

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