RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 CEBPAP49715 358 aaPredicted RBP17.67■□□□□ 0.42
CCDC78-210ENST00000478979 LRRC7Q96NW7 1537 aa17.67■□□□□ 0.42
CCDC78-210ENST00000478979 SLC26A8Q96RN1 970 aa17.66■□□□□ 0.42
CCDC78-210ENST00000478979 CHMP5Q9NZZ3 219 aa17.66■□□□□ 0.42
CCDC78-210ENST00000478979 MAP2P11137 1827 aaKnown RBP17.66■□□□□ 0.42
CCDC78-210ENST00000478979 AEBP1Q8IUX7 1158 aa17.66■□□□□ 0.42
CCDC78-210ENST00000478979 NFE2L2Q16236 605 aa17.65■□□□□ 0.42
CCDC78-210ENST00000478979 KRT24Q2M2I5 525 aa17.64■□□□□ 0.41
CCDC78-210ENST00000478979 TRIM44Q96DX7 344 aaPredicted RBP17.64■□□□□ 0.41
CCDC78-210ENST00000478979 MBIPQ9NS73 344 aa17.64■□□□□ 0.41
CCDC78-210ENST00000478979 IPO8O15397 1037 aaKnown RBP17.63■□□□□ 0.41
CCDC78-210ENST00000478979 TPM2P07951 284 aa17.63■□□□□ 0.41
CCDC78-210ENST00000478979 KIF16BQ96L93 1317 aa17.63■□□□□ 0.41
CCDC78-210ENST00000478979 DIP2BQ9P265 1576 aa17.63■□□□□ 0.41
CCDC78-210ENST00000478979 RIMBP3CA6NJZ7 1639 aa17.62■□□□□ 0.41
CCDC78-210ENST00000478979 RIMBP3BA6NNM3 1639 aa17.62■□□□□ 0.41
CCDC78-210ENST00000478979 RIMBP3Q9UFD9 1639 aa17.62■□□□□ 0.41
CCDC78-210ENST00000478979 IL13P35225 146 aa17.62■□□□□ 0.41
CCDC78-210ENST00000478979 CCDC61Q9Y6R9 512 aa17.62■□□□□ 0.41
CCDC78-210ENST00000478979 ZMYM3Q14202 1370 aa17.62■□□□□ 0.41
CCDC78-210ENST00000478979 C8orf58Q8NAV2 365 aa17.62■□□□□ 0.41
CCDC78-210ENST00000478979 ZBTB40Q9NUA8 1239 aa17.62■□□□□ 0.41
CCDC78-210ENST00000478979 PNPLA6Q8IY17 1366 aa17.62■□□□□ 0.41
CCDC78-210ENST00000478979 CT47B1P0C2W7 299 aaPredicted RBP17.61■□□□□ 0.41
CCDC78-210ENST00000478979 KIF20BQ96Q89 1820 aa17.61■□□□□ 0.41
CCDC78-210ENST00000478979 ANKRD45Q5TZF3 282 aa17.61■□□□□ 0.41
CCDC78-210ENST00000478979 PDCL3Q9H2J4 239 aa17.61■□□□□ 0.41
CCDC78-210ENST00000478979 PRR36Q9H6K5 1346 aa17.61■□□□□ 0.41
CCDC78-210ENST00000478979 SULT6B1Q6IMI4 303 aa17.61■□□□□ 0.41
CCDC78-210ENST00000478979 DDX11L8A8MPP1 907 aa17.6■□□□□ 0.41
CCDC78-210ENST00000478979 VAMP4O75379 141 aa17.6■□□□□ 0.41
CCDC78-210ENST00000478979 PLEKHG5O94827 1062 aa17.6■□□□□ 0.41
CCDC78-210ENST00000478979 TWISTNBQ3B726 338 aaPredicted RBP17.6■□□□□ 0.41
CCDC78-210ENST00000478979 IL16Q14005 1332 aa17.6■□□□□ 0.41
CCDC78-210ENST00000478979 APBB1O00213 710 aa17.6■□□□□ 0.41
CCDC78-210ENST00000478979 MCM10Q7L590 875 aa17.6■□□□□ 0.41
CCDC78-210ENST00000478979 MIS18AQ9NYP9 233 aa17.59■□□□□ 0.41
CCDC78-210ENST00000478979 ISY1Q9ULR0 285 aaKnown RBP17.59■□□□□ 0.41
CCDC78-210ENST00000478979 AAMPQ13685 434 aa17.59■□□□□ 0.41
CCDC78-210ENST00000478979 FAM135BQ49AJ0 1406 aa17.59■□□□□ 0.41
CCDC78-210ENST00000478979 CPS1P31327 1500 aa17.58■□□□□ 0.41
CCDC78-210ENST00000478979 ANKRD26Q9UPS8 1709 aa17.58■□□□□ 0.41
CCDC78-210ENST00000478979 C22orf23Q9BZE7 217 aa17.58■□□□□ 0.4
CCDC78-210ENST00000478979 HDAC1Q13547 482 aaPredicted RBP17.57■□□□□ 0.4
CCDC78-210ENST00000478979 HSP90AB2PQ58FF8 381 aa17.57■□□□□ 0.4
CCDC78-210ENST00000478979 GAS2L3Q86XJ1 694 aa17.57■□□□□ 0.4
CCDC78-210ENST00000478979 GNAI1P63096 354 aa17.57■□□□□ 0.4
CCDC78-210ENST00000478979 NUTM2GQ5VZR2 741 aa17.57■□□□□ 0.4
CCDC78-210ENST00000478979 KIAA1211Q6ZU35 1233 aa17.57■□□□□ 0.4
CCDC78-210ENST00000478979 MRPL50Q8N5N7 158 aaKnown RBP17.56■□□□□ 0.4
CCDC78-210ENST00000478979 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.56■□□□□ 0.4
CCDC78-210ENST00000478979 MED14O60244 1454 aa17.56■□□□□ 0.4
CCDC78-210ENST00000478979 LTKP29376 864 aa17.56■□□□□ 0.4
CCDC78-210ENST00000478979 ROBO2Q9HCK4 1378 aa17.56■□□□□ 0.4
CCDC78-210ENST00000478979 ACEP12821 1306 aa17.55■□□□□ 0.4
CCDC78-210ENST00000478979 EDC4Q6P2E9 1401 aaKnown RBP17.55■□□□□ 0.4
CCDC78-210ENST00000478979 ZNF692Q9BU19 519 aaPredicted RBP17.55■□□□□ 0.4
CCDC78-210ENST00000478979 ATP7BP35670 1465 aa17.55■□□□□ 0.4
CCDC78-210ENST00000478979 ALDH1L2Q3SY69 923 aa17.55■□□□□ 0.4
CCDC78-210ENST00000478979 SMC5Q8IY18 1101 aa17.55■□□□□ 0.4
CCDC78-210ENST00000478979 EIF4A2Q14240 407 aaKnown RBP17.54■□□□□ 0.4
CCDC78-210ENST00000478979 CHD1LQ86WJ1 897 aa17.54■□□□□ 0.4
CCDC78-210ENST00000478979 FOXD4L1Q9NU39 408 aa17.54■□□□□ 0.4
CCDC78-210ENST00000478979 PODXL2Q9NZ53 605 aa17.54■□□□□ 0.4
CCDC78-210ENST00000478979 NCBP3Q53F19 620 aaKnown RBP17.53■□□□□ 0.4
CCDC78-210ENST00000478979 ZBTB7BO15156 539 aaPredicted RBP17.53■□□□□ 0.4
CCDC78-210ENST00000478979 HSCBQ8IWL3 235 aa17.53■□□□□ 0.4
CCDC78-210ENST00000478979 FOXO3O43524 673 aa17.53■□□□□ 0.4
CCDC78-210ENST00000478979 CPSF1Q10570 1443 aaKnown RBP17.53■□□□□ 0.4
CCDC78-210ENST00000478979 TNRQ92752 1358 aa17.52■□□□□ 0.4
CCDC78-210ENST00000478979 IFT57Q9NWB7 429 aa17.52■□□□□ 0.4
CCDC78-210ENST00000478979 SPATA31D1Q6ZQQ2 1576 aa17.51■□□□□ 0.39
CCDC78-210ENST00000478979 NUCB1Q02818 461 aa17.51■□□□□ 0.39
CCDC78-210ENST00000478979 HDGFP51858 240 aaKnown RBP17.51■□□□□ 0.39
CCDC78-210ENST00000478979 CALD1Q05682 793 aaKnown RBP17.51■□□□□ 0.39
CCDC78-210ENST00000478979 RBM33Q96EV2 1170 aaKnown RBP17.51■□□□□ 0.39
CCDC78-210ENST00000478979 CFAP44Q96MT7 982 aa17.51■□□□□ 0.39
CCDC78-210ENST00000478979 PPP6R1Q9UPN7 881 aa17.51■□□□□ 0.39
CCDC78-210ENST00000478979 NECTIN2Q92692 538 aa17.51■□□□□ 0.39
CCDC78-210ENST00000478979 TTC21BQ7Z4L5 1316 aa17.5■□□□□ 0.39
CCDC78-210ENST00000478979 SIRT2Q8IXJ6 389 aa17.5■□□□□ 0.39
CCDC78-210ENST00000478979 TNPO1Q92973 898 aaKnown RBP17.5■□□□□ 0.39
CCDC78-210ENST00000478979 NRXN3Q9Y4C0 1643 aa17.5■□□□□ 0.39
CCDC78-210ENST00000478979 C14orf37Q86TY3 774 aa17.49■□□□□ 0.39
CCDC78-210ENST00000478979 LTV1Q96GA3 475 aaPredicted RBP17.49■□□□□ 0.39
CCDC78-210ENST00000478979 RBM10P98175 930 aaKnown RBP17.49■□□□□ 0.39
CCDC78-210ENST00000478979 NGDNQ8NEJ9 315 aaKnown RBP17.49■□□□□ 0.39
CCDC78-210ENST00000478979 SETD1AO15047 1707 aaKnown RBP17.48■□□□□ 0.39
CCDC78-210ENST00000478979 DDIT3P35638 169 aa17.48■□□□□ 0.39
CCDC78-210ENST00000478979 SLC4A10Q6U841 1118 aa17.48■□□□□ 0.39
CCDC78-210ENST00000478979 NCOA3Q9Y6Q9 1424 aa17.47■□□□□ 0.39
CCDC78-210ENST00000478979 ZBTB7CA1YPR0 619 aa17.47■□□□□ 0.39
CCDC78-210ENST00000478979 LMOD3Q0VAK6 560 aa17.47■□□□□ 0.39
CCDC78-210ENST00000478979 PRDM4Q9UKN5 801 aa17.47■□□□□ 0.39
CCDC78-210ENST00000478979 DLC1Q96QB1 1528 aa17.47■□□□□ 0.39
CCDC78-210ENST00000478979 ZNF853P0CG23 659 aa17.47■□□□□ 0.39
CCDC78-210ENST00000478979 C16orf71Q8IYS4 520 aaPredicted RBP17.47■□□□□ 0.39
CCDC78-210ENST00000478979 TMEM2Q9UHN6 1383 aa17.47■□□□□ 0.39
CCDC78-210ENST00000478979 DLG5Q8TDM6 1919 aa17.47■□□□□ 0.39
CCDC78-210ENST00000478979 AGLP35573 1532 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms