RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 PRDM9Q9NQV7 894 aa10.02□□□□□ -0.81
HOXB3-209ENST00000478644 FCF1Q9Y324 198 aaKnown RBP10.02□□□□□ -0.81
HOXB3-209ENST00000478644 MLH3Q9UHC1 1453 aa10.02□□□□□ -0.81
HOXB3-209ENST00000478644 DXOO77932 396 aaKnown RBP10.01□□□□□ -0.81
HOXB3-209ENST00000478644 PLEKHH2Q8IVE3 1493 aa10.01□□□□□ -0.81
HOXB3-209ENST00000478644 KDM5CP41229 1560 aa10.01□□□□□ -0.81
HOXB3-209ENST00000478644 REREQ9P2R6 1566 aa10.01□□□□□ -0.81
HOXB3-209ENST00000478644 GDF9O60383 454 aa10□□□□□ -0.81
HOXB3-209ENST00000478644 ZNF697Q5TEC3 545 aa10□□□□□ -0.81
HOXB3-209ENST00000478644 PCF11O94913 1555 aaKnown RBP10□□□□□ -0.81
HOXB3-209ENST00000478644 MADDQ8WXG6 1647 aa10□□□□□ -0.81
HOXB3-209ENST00000478644 YEATS2Q9ULM3 1422 aa9.99□□□□□ -0.81
HOXB3-209ENST00000478644 LCE2BO14633 110 aa9.99□□□□□ -0.81
HOXB3-209ENST00000478644 GJA5P36382 358 aa9.99□□□□□ -0.81
HOXB3-209ENST00000478644 AFAP1Q8N556 730 aa9.99□□□□□ -0.81
HOXB3-209ENST00000478644 KIAA1107Q9UPP5 1409 aa9.99□□□□□ -0.81
HOXB3-209ENST00000478644 GUCA2AQ02747 115 aa9.98□□□□□ -0.81
HOXB3-209ENST00000478644 PCDHGC3Q9UN70 934 aa9.98□□□□□ -0.81
HOXB3-209ENST00000478644 CNTLNQ9NXG0 1405 aa9.98□□□□□ -0.81
HOXB3-209ENST00000478644 AGLP35573 1532 aa9.97□□□□□ -0.81
HOXB3-209ENST00000478644 ARHGEF12Q9NZN5 1544 aa9.97□□□□□ -0.81
HOXB3-209ENST00000478644 PREX2Q70Z35 1606 aa9.97□□□□□ -0.81
HOXB3-209ENST00000478644 CD2BP2O95400 341 aaKnown RBP9.97□□□□□ -0.81
HOXB3-209ENST00000478644 FDX1P10109 184 aa9.97□□□□□ -0.81
HOXB3-209ENST00000478644 DIXDC1Q155Q3 683 aa9.97□□□□□ -0.81
HOXB3-209ENST00000478644 FBXO41Q8TF61 875 aa9.97□□□□□ -0.81
HOXB3-209ENST00000478644 BEGAINQ9BUH8 593 aa9.97□□□□□ -0.81
HOXB3-209ENST00000478644 RIMS1Q86UR5 1692 aaKnown RBP9.96□□□□□ -0.81
HOXB3-209ENST00000478644 MS4A1P11836 297 aa9.96□□□□□ -0.82
HOXB3-209ENST00000478644 PDE4DQ08499 809 aa9.96□□□□□ -0.82
HOXB3-209ENST00000478644 TRAF7Q6Q0C0 670 aa9.96□□□□□ -0.82
HOXB3-209ENST00000478644 RETREG3Q86VR2 466 aa9.96□□□□□ -0.82
HOXB3-209ENST00000478644 SLC24A3Q9HC58 644 aa9.96□□□□□ -0.82
HOXB3-209ENST00000478644 CFDP1Q9UEE9 299 aaPredicted RBP9.96□□□□□ -0.82
HOXB3-209ENST00000478644 MTUS2Q5JR59 1369 aa9.96□□□□□ -0.82
HOXB3-209ENST00000478644 CCNB3Q8WWL7 1395 aa9.96□□□□□ -0.82
HOXB3-209ENST00000478644 LMTK3Q96Q04 1460 aa9.96□□□□□ -0.82
HOXB3-209ENST00000478644 CDC42BPBQ9Y5S2 1711 aa9.96□□□□□ -0.82
HOXB3-209ENST00000478644 MOXD2PA6NHM9 499 aa9.95□□□□□ -0.82
HOXB3-209ENST00000478644 MLECQ14165 292 aa9.95□□□□□ -0.82
HOXB3-209ENST00000478644 PKD2L1Q9P0L9 805 aa9.95□□□□□ -0.82
HOXB3-209ENST00000478644 ABCC1P33527 1531 aa9.95□□□□□ -0.82
HOXB3-209ENST00000478644 FER1L4A9Z1Z3 1794 aa9.95□□□□□ -0.82
HOXB3-209ENST00000478644 SETD1BQ9UPS6 1966 aaKnown RBP9.94□□□□□ -0.82
HOXB3-209ENST00000478644 SPAG9O60271 1321 aaKnown RBP9.94□□□□□ -0.82
HOXB3-209ENST00000478644 TPRNQ4KMQ1 711 aa9.94□□□□□ -0.82
HOXB3-209ENST00000478644 SYMPKQ92797 1274 aaKnown RBP9.94□□□□□ -0.82
HOXB3-209ENST00000478644 LRRIQ1Q96JM4 1722 aa9.93□□□□□ -0.82
HOXB3-209ENST00000478644 GPATCH8Q9UKJ3 1502 aaKnown RBP9.93□□□□□ -0.82
HOXB3-209ENST00000478644 JUNDP17535 347 aa9.93□□□□□ -0.82
HOXB3-209ENST00000478644 NDUFV2P19404 249 aa9.93□□□□□ -0.82
HOXB3-209ENST00000478644 UHRF1BP1Q6BDS2 1440 aa9.92□□□□□ -0.82
HOXB3-209ENST00000478644 ZBTB24O43167 697 aaPredicted RBP9.92□□□□□ -0.82
HOXB3-209ENST00000478644 TBC1D2Q9BYX2 928 aa9.92□□□□□ -0.82
HOXB3-209ENST00000478644 ZNF777Q9ULD5 760 aaPredicted RBP9.92□□□□□ -0.82
HOXB3-209ENST00000478644 ITSN2Q9NZM3 1697 aa9.92□□□□□ -0.82
HOXB3-209ENST00000478644 DIP2CQ9Y2E4 1556 aa9.92□□□□□ -0.82
HOXB3-209ENST00000478644 TRAPPC8Q9Y2L5 1435 aa9.91□□□□□ -0.82
HOXB3-209ENST00000478644 CDC42BPAQ5VT25 1732 aa9.91□□□□□ -0.82
HOXB3-209ENST00000478644 PREX1Q8TCU6 1659 aa9.91□□□□□ -0.82
HOXB3-209ENST00000478644 LOC105371045A0A1W2PR82 267 aa9.91□□□□□ -0.82
HOXB3-209ENST00000478644 SPDYE5A6NIY4 337 aa9.91□□□□□ -0.82
HOXB3-209ENST00000478644 DGAT1O75907 488 aa9.91□□□□□ -0.82
HOXB3-209ENST00000478644 ARXQ96QS3 562 aa9.91□□□□□ -0.82
HOXB3-209ENST00000478644 RTEL1-TNFRSF6BF6WH68 1400 aa9.9□□□□□ -0.82
HOXB3-209ENST00000478644 CEP162Q5TB80 1403 aa9.9□□□□□ -0.82
HOXB3-209ENST00000478644 SPTLC1O15269 473 aa9.9□□□□□ -0.82
HOXB3-209ENST00000478644 DESI1Q6ICB0 168 aa9.9□□□□□ -0.82
HOXB3-209ENST00000478644 RSBN1LQ6PCB5 846 aaPredicted RBP9.9□□□□□ -0.82
HOXB3-209ENST00000478644 EHBP1L1Q8N3D4 1523 aa9.9□□□□□ -0.82
HOXB3-209ENST00000478644 NPATQ14207 1427 aa9.9□□□□□ -0.83
HOXB3-209ENST00000478644 C6orf229H3BNL8 230 aa9.89□□□□□ -0.83
HOXB3-209ENST00000478644 HNRNPMP52272 730 aaKnown RBP eCLIP9.89□□□□□ -0.83
HOXB3-209ENST00000478644 TRIM32Q13049 653 aa9.89□□□□□ -0.83
HOXB3-209ENST00000478644 SAMD9LQ8IVG5 1584 aa9.88□□□□□ -0.83
HOXB3-209ENST00000478644 MTMR2Q13614 643 aa9.88□□□□□ -0.83
HOXB3-209ENST00000478644 TOR4AQ9NXH8 423 aa9.88□□□□□ -0.83
HOXB3-209ENST00000478644 KIDINS220Q9ULH0 1771 aa9.88□□□□□ -0.83
HOXB3-209ENST00000478644 ABCA6Q8N139 1617 aa9.87□□□□□ -0.83
HOXB3-209ENST00000478644 TNFRSF10AO00220 468 aa9.87□□□□□ -0.83
HOXB3-209ENST00000478644 TSPY4P0CV99 314 aa9.87□□□□□ -0.83
HOXB3-209ENST00000478644 TSPY10P0CW01 314 aa9.87□□□□□ -0.83
HOXB3-209ENST00000478644 TUSC1Q2TAM9 212 aa9.87□□□□□ -0.83
HOXB3-209ENST00000478644 SIGLEC1Q9BZZ2 1709 aa9.87□□□□□ -0.83
HOXB3-209ENST00000478644 FAM135AQ9P2D6 1515 aa9.87□□□□□ -0.83
HOXB3-209ENST00000478644 MROH2AA6NES4 1674 aa9.87□□□□□ -0.83
HOXB3-209ENST00000478644 WNT7AO00755 349 aa9.86□□□□□ -0.83
HOXB3-209ENST00000478644 PTPRTO14522 1441 aa9.86□□□□□ -0.83
HOXB3-209ENST00000478644 PRPF38BQ5VTL8 546 aaKnown RBP9.86□□□□□ -0.83
HOXB3-209ENST00000478644 ATP7AQ04656 1500 aa9.86□□□□□ -0.83
HOXB3-209ENST00000478644 SYCP2Q9BX26 1530 aa9.86□□□□□ -0.83
HOXB3-209ENST00000478644 ZMYM3Q14202 1370 aa9.86□□□□□ -0.83
HOXB3-209ENST00000478644 A2MP01023 1474 aa9.85□□□□□ -0.83
HOXB3-209ENST00000478644 HSPA2P54652 639 aa9.85□□□□□ -0.83
HOXB3-209ENST00000478644 FOXC1Q12948 553 aa9.85□□□□□ -0.83
HOXB3-209ENST00000478644 PKDCCQ504Y2 493 aa9.85□□□□□ -0.83
HOXB3-209ENST00000478644 RIC3Q7Z5B4 369 aa9.85□□□□□ -0.83
HOXB3-209ENST00000478644 NUDT12Q9BQG2 462 aa9.85□□□□□ -0.83
HOXB3-209ENST00000478644 MAP3K1Q13233 1512 aa9.85□□□□□ -0.83
HOXB3-209ENST00000478644 DHX29Q7Z478 1369 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms