RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 PRIMPOLQ96LW4 560 aa12.07□□□□□ -0.48
COL13A1-207ENST00000478219 RABEP1Q15276 862 aa12.06□□□□□ -0.48
COL13A1-207ENST00000478219 CFAP70Q5T0N1 1121 aa12.06□□□□□ -0.48
COL13A1-207ENST00000478219 SLC12A5Q9H2X9 1139 aa12.06□□□□□ -0.48
COL13A1-207ENST00000478219 CGNQ9P2M7 1197 aaKnown RBP12.06□□□□□ -0.48
COL13A1-207ENST00000478219 TRIM35Q9UPQ4 493 aa12.06□□□□□ -0.48
COL13A1-207ENST00000478219 CD109Q6YHK3 1445 aa12.05□□□□□ -0.48
COL13A1-207ENST00000478219 PDCL2Q8N4E4 241 aa12.05□□□□□ -0.48
COL13A1-207ENST00000478219 USP25Q9UHP3 1055 aa12.05□□□□□ -0.48
COL13A1-207ENST00000478219 CDC45O75419 566 aa12.05□□□□□ -0.48
COL13A1-207ENST00000478219 FOXD4L6Q3SYB3 417 aaPredicted RBP12.05□□□□□ -0.48
COL13A1-207ENST00000478219 FOXD4L3Q6VB84 417 aaPredicted RBP12.05□□□□□ -0.48
COL13A1-207ENST00000478219 USP26Q9BXU7 913 aa12.05□□□□□ -0.48
COL13A1-207ENST00000478219 ZNF518AQ6AHZ1 1483 aa12.04□□□□□ -0.48
COL13A1-207ENST00000478219 TSPY26PQ9H489 355 aa12.04□□□□□ -0.48
COL13A1-207ENST00000478219 DUOX2Q9NRD8 1548 aa12.04□□□□□ -0.48
COL13A1-207ENST00000478219 TTC37Q6PGP7 1564 aa12.04□□□□□ -0.48
COL13A1-207ENST00000478219 C16orf71Q8IYS4 520 aaPredicted RBP12.04□□□□□ -0.48
COL13A1-207ENST00000478219 GDPD2Q9HCC8 539 aa12.04□□□□□ -0.48
COL13A1-207ENST00000478219 ZBTB7BO15156 539 aaPredicted RBP12.03□□□□□ -0.48
COL13A1-207ENST00000478219 GADD45BO75293 160 aaPredicted RBP12.03□□□□□ -0.48
COL13A1-207ENST00000478219 FKBP5Q13451 457 aaPredicted RBP12.03□□□□□ -0.48
COL13A1-207ENST00000478219 SYCP2Q9BX26 1530 aa12.03□□□□□ -0.48
COL13A1-207ENST00000478219 RIOK3O14730 519 aaKnown RBP12.03□□□□□ -0.48
COL13A1-207ENST00000478219 MAPK8IP2Q13387 824 aaPredicted RBP12.03□□□□□ -0.48
COL13A1-207ENST00000478219 SPHKAPQ2M3C7 1700 aa12.03□□□□□ -0.48
COL13A1-207ENST00000478219 PLCD3Q8N3E9 789 aa12.02□□□□□ -0.48
COL13A1-207ENST00000478219 SMARCA5O60264 1052 aaPredicted RBP12.02□□□□□ -0.49
COL13A1-207ENST00000478219 CT47B1P0C2W7 299 aaPredicted RBP12.02□□□□□ -0.49
COL13A1-207ENST00000478219 OTUD7AQ8TE49 926 aaPredicted RBP12.02□□□□□ -0.49
COL13A1-207ENST00000478219 ADCY5O95622 1261 aa12.01□□□□□ -0.49
COL13A1-207ENST00000478219 TMPOP42166 694 aaKnown RBP12.01□□□□□ -0.49
COL13A1-207ENST00000478219 PLEKHM2Q8IWE5 1019 aa12.01□□□□□ -0.49
COL13A1-207ENST00000478219 ANKRD7Q92527 254 aa12.01□□□□□ -0.49
COL13A1-207ENST00000478219 CWC22Q9HCG8 908 aaKnown RBP12.01□□□□□ -0.49
COL13A1-207ENST00000478219 SPTLC3Q9NUV7 552 aa12.01□□□□□ -0.49
COL13A1-207ENST00000478219 ATAD2Q6PL18 1390 aa12.01□□□□□ -0.49
COL13A1-207ENST00000478219 PTPRTO14522 1441 aa12.01□□□□□ -0.49
COL13A1-207ENST00000478219 ADGRB2O60241 1585 aa12□□□□□ -0.49
COL13A1-207ENST00000478219 ZNF771Q7L3S4 317 aaPredicted RBP12□□□□□ -0.49
COL13A1-207ENST00000478219 GCC1Q96CN9 775 aa12□□□□□ -0.49
COL13A1-207ENST00000478219 PLEKHF1Q96S99 279 aa12□□□□□ -0.49
COL13A1-207ENST00000478219 PYCARDQ9ULZ3 195 aa12□□□□□ -0.49
COL13A1-207ENST00000478219 PLCB2Q00722 1185 aa12□□□□□ -0.49
COL13A1-207ENST00000478219 ADGRF5Q8IZF2 1346 aa11.99□□□□□ -0.49
COL13A1-207ENST00000478219 KCNF1Q9H3M0 494 aa11.99□□□□□ -0.49
COL13A1-207ENST00000478219 KIAA1210Q9ULL0 1709 aa11.99□□□□□ -0.49
COL13A1-207ENST00000478219 ARHGAP5Q13017 1502 aa11.99□□□□□ -0.49
COL13A1-207ENST00000478219 U2SURPO15042 1029 aaKnown RBP11.99□□□□□ -0.49
COL13A1-207ENST00000478219 AP5Z1O43299 807 aa11.99□□□□□ -0.49
COL13A1-207ENST00000478219 MBD3O95983 291 aa11.99□□□□□ -0.49
COL13A1-207ENST00000478219 PDIA4P13667 645 aaKnown RBP11.98□□□□□ -0.49
COL13A1-207ENST00000478219 NAA30Q147X3 362 aaPredicted RBP11.98□□□□□ -0.49
COL13A1-207ENST00000478219 SENP3Q9H4L4 574 aaPredicted RBP11.98□□□□□ -0.49
COL13A1-207ENST00000478219 PPRC1Q5VV67 1664 aaKnown RBP11.98□□□□□ -0.49
COL13A1-207ENST00000478219 TCHHQ07283 1943 aa11.98□□□□□ -0.49
COL13A1-207ENST00000478219 IPO8O15397 1037 aaKnown RBP11.98□□□□□ -0.49
COL13A1-207ENST00000478219 HCLS1P14317 486 aaPredicted RBP11.98□□□□□ -0.49
COL13A1-207ENST00000478219 CFAP53Q96M91 514 aa11.98□□□□□ -0.49
COL13A1-207ENST00000478219 MED14O60244 1454 aa11.98□□□□□ -0.49
COL13A1-207ENST00000478219 ABCC11Q96J66 1382 aa11.97□□□□□ -0.49
COL13A1-207ENST00000478219 HAP1P54257 671 aaPredicted RBP11.97□□□□□ -0.49
COL13A1-207ENST00000478219 NOL8Q76FK4 1167 aaKnown RBP11.97□□□□□ -0.49
COL13A1-207ENST00000478219 IPO4Q8TEX9 1081 aaKnown RBP11.97□□□□□ -0.49
COL13A1-207ENST00000478219 CLTCL1P53675 1640 aa11.97□□□□□ -0.49
COL13A1-207ENST00000478219 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.97□□□□□ -0.49
COL13A1-207ENST00000478219 ST18O60284 1047 aa11.97□□□□□ -0.49
COL13A1-207ENST00000478219 BRD1O95696 1058 aa11.97□□□□□ -0.49
COL13A1-207ENST00000478219 ADRA2BP18089 450 aa11.97□□□□□ -0.49
COL13A1-207ENST00000478219 IRX5P78411 483 aaPredicted RBP11.97□□□□□ -0.49
COL13A1-207ENST00000478219 TTC22Q5TAA0 569 aa11.97□□□□□ -0.49
COL13A1-207ENST00000478219 TMX3Q96JJ7 454 aa11.97□□□□□ -0.49
COL13A1-207ENST00000478219 NEURL4Q96JN8 1562 aa11.96□□□□□ -0.49
COL13A1-207ENST00000478219 CTIFO43310 598 aaKnown RBP11.96□□□□□ -0.49
COL13A1-207ENST00000478219 NCBP1Q09161 790 aaKnown RBP11.96□□□□□ -0.49
COL13A1-207ENST00000478219 KIAA1524Q8TCG1 905 aa11.96□□□□□ -0.49
COL13A1-207ENST00000478219 SLFN14P0C7P3 912 aa11.96□□□□□ -0.5
COL13A1-207ENST00000478219 SDSP20132 328 aa11.96□□□□□ -0.5
COL13A1-207ENST00000478219 USP48Q86UV5 1035 aa11.95□□□□□ -0.5
COL13A1-207ENST00000478219 TRPM2O94759 1503 aa11.95□□□□□ -0.5
COL13A1-207ENST00000478219 ELL2O00472 640 aaPredicted RBP11.95□□□□□ -0.5
COL13A1-207ENST00000478219 TSPYL6Q8N831 410 aa11.95□□□□□ -0.5
COL13A1-207ENST00000478219 APBB1O00213 710 aa11.94□□□□□ -0.5
COL13A1-207ENST00000478219 KCNJ4P48050 445 aa11.94□□□□□ -0.5
COL13A1-207ENST00000478219 CTNNA3Q9UI47 895 aa11.94□□□□□ -0.5
COL13A1-207ENST00000478219 UHRF1BP1LA0JNW5 1464 aa11.94□□□□□ -0.5
COL13A1-207ENST00000478219 ABCA6Q8N139 1617 aa11.94□□□□□ -0.5
COL13A1-207ENST00000478219 NEK4P51957 841 aa11.94□□□□□ -0.5
COL13A1-207ENST00000478219 SPC24Q8NBT2 197 aa11.94□□□□□ -0.5
COL13A1-207ENST00000478219 OGFRQ9NZT2 677 aa11.94□□□□□ -0.5
COL13A1-207ENST00000478219 INTS3Q68E01 1043 aaKnown RBP11.93□□□□□ -0.5
COL13A1-207ENST00000478219 TRAK1Q9UPV9 953 aa11.93□□□□□ -0.5
COL13A1-207ENST00000478219 KNDC1Q76NI1 1749 aa11.93□□□□□ -0.5
COL13A1-207ENST00000478219 ADGRL1O94910 1474 aa11.93□□□□□ -0.5
COL13A1-207ENST00000478219 ALDH1L2Q3SY69 923 aa11.93□□□□□ -0.5
COL13A1-207ENST00000478219 THUMPD2Q9BTF0 503 aaKnown RBP11.93□□□□□ -0.5
COL13A1-207ENST00000478219 KDM4AO75164 1064 aa11.92□□□□□ -0.5
COL13A1-207ENST00000478219 MRPL50Q8N5N7 158 aaKnown RBP11.92□□□□□ -0.5
COL13A1-207ENST00000478219 FEZ1Q99689 392 aa11.92□□□□□ -0.5
COL13A1-207ENST00000478219 UVSSAQ2YD98 709 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms