RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 FMN2Q9NZ56 1722 aa10.64□□□□□ -0.71
BRCA1-214ENST00000477152 YTHDC2Q9H6S0 1430 aaKnown RBP10.64□□□□□ -0.71
BRCA1-214ENST00000477152 C2orf72A6NCS6 295 aa10.64□□□□□ -0.71
BRCA1-214ENST00000477152 DPYSL4O14531 572 aa10.64□□□□□ -0.71
BRCA1-214ENST00000477152 STAC3Q96MF2 364 aa10.64□□□□□ -0.71
BRCA1-214ENST00000477152 TMEM121BQ9BXQ6 578 aaPredicted RBP10.64□□□□□ -0.71
BRCA1-214ENST00000477152 WAPLQ7Z5K2 1190 aa10.63□□□□□ -0.71
BRCA1-214ENST00000477152 ZC3H15Q8WU90 426 aaKnown RBP10.63□□□□□ -0.71
BRCA1-214ENST00000477152 EIF3AQ14152 1382 aaKnown RBP10.63□□□□□ -0.71
BRCA1-214ENST00000477152 PXDNQ92626 1479 aa10.63□□□□□ -0.71
BRCA1-214ENST00000477152 ATRNO75882 1429 aa10.63□□□□□ -0.71
BRCA1-214ENST00000477152 IER5LQ5T953 404 aa10.63□□□□□ -0.71
BRCA1-214ENST00000477152 TMC2Q8TDI7 906 aa10.63□□□□□ -0.71
BRCA1-214ENST00000477152 C14orf93Q9H972 538 aaKnown RBP10.63□□□□□ -0.71
BRCA1-214ENST00000477152 POGKQ9P215 609 aa10.63□□□□□ -0.71
BRCA1-214ENST00000477152 ARIH1Q9Y4X5 557 aaPredicted RBP10.63□□□□□ -0.71
BRCA1-214ENST00000477152 MYOM2P54296 1465 aa10.63□□□□□ -0.71
BRCA1-214ENST00000477152 TMEM132EQ6IEE7 984 aa10.62□□□□□ -0.71
BRCA1-214ENST00000477152 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.62□□□□□ -0.71
BRCA1-214ENST00000477152 NUTM2FA1L443 756 aa10.61□□□□□ -0.71
BRCA1-214ENST00000477152 PLCG2P16885 1265 aa10.61□□□□□ -0.71
BRCA1-214ENST00000477152 TMEM92Q6UXU6 159 aa10.61□□□□□ -0.71
BRCA1-214ENST00000477152 KRT28Q7Z3Y7 464 aa10.61□□□□□ -0.71
BRCA1-214ENST00000477152 TULP1O00294 542 aaPredicted RBP10.61□□□□□ -0.71
BRCA1-214ENST00000477152 FOXK1P85037 733 aa10.61□□□□□ -0.71
BRCA1-214ENST00000477152 GJD4Q96KN9 370 aaPredicted RBP10.61□□□□□ -0.71
BRCA1-214ENST00000477152 DCBLD2Q96PD2 775 aa10.61□□□□□ -0.71
BRCA1-214ENST00000477152 SPATA31A3Q5VYP0 1347 aa10.6□□□□□ -0.71
BRCA1-214ENST00000477152 ARHGEF10O15013 1369 aa10.6□□□□□ -0.71
BRCA1-214ENST00000477152 POTEFA5A3E0 1075 aa10.6□□□□□ -0.71
BRCA1-214ENST00000477152 POTEHQ6S545 545 aa10.6□□□□□ -0.71
BRCA1-214ENST00000477152 UNC5CLQ8IV45 518 aa10.6□□□□□ -0.71
BRCA1-214ENST00000477152 XPCQ01831 940 aaPredicted RBP10.59□□□□□ -0.71
BRCA1-214ENST00000477152 SF3B2Q13435 895 aaKnown RBP10.59□□□□□ -0.71
BRCA1-214ENST00000477152 PLPP6Q8IY26 295 aa10.59□□□□□ -0.71
BRCA1-214ENST00000477152 KIF3CO14782 793 aa10.59□□□□□ -0.71
BRCA1-214ENST00000477152 RBM26Q5T8P6 1007 aaKnown RBP10.59□□□□□ -0.71
BRCA1-214ENST00000477152 DLC1Q96QB1 1528 aa10.58□□□□□ -0.72
BRCA1-214ENST00000477152 SBNO1A3KN83 1393 aa10.58□□□□□ -0.72
BRCA1-214ENST00000477152 TNS3Q68CZ2 1445 aa10.58□□□□□ -0.72
BRCA1-214ENST00000477152 ANKARQ7Z5J8 1434 aa10.58□□□□□ -0.72
BRCA1-214ENST00000477152 SEC24BO95487 1268 aa10.58□□□□□ -0.72
BRCA1-214ENST00000477152 NRXN1Q9ULB1 1477 aa10.58□□□□□ -0.72
BRCA1-214ENST00000477152 GPRASP1Q5JY77 1395 aa10.58□□□□□ -0.72
BRCA1-214ENST00000477152 CFAP70Q5T0N1 1121 aa10.57□□□□□ -0.72
BRCA1-214ENST00000477152 PRAM1Q96QH2 718 aa10.57□□□□□ -0.72
BRCA1-214ENST00000477152 RGPD8O14715 1765 aaPredicted RBP10.57□□□□□ -0.72
BRCA1-214ENST00000477152 PLEKHH1Q9ULM0 1364 aa10.57□□□□□ -0.72
BRCA1-214ENST00000477152 USP32Q8NFA0 1604 aa10.57□□□□□ -0.72
BRCA1-214ENST00000477152 BCL9LQ86UU0 1499 aa10.57□□□□□ -0.72
BRCA1-214ENST00000477152 NWD2Q9ULI1 1742 aa10.57□□□□□ -0.72
BRCA1-214ENST00000477152 POTEIP0CG38 1075 aa10.56□□□□□ -0.72
BRCA1-214ENST00000477152 CCDC9Q9Y3X0 531 aaKnown RBP10.56□□□□□ -0.72
BRCA1-214ENST00000477152 G3V3G9 751 aa10.56□□□□□ -0.72
BRCA1-214ENST00000477152 HRCP23327 699 aa10.56□□□□□ -0.72
BRCA1-214ENST00000477152 SLIT2O94813 1529 aa10.55□□□□□ -0.72
BRCA1-214ENST00000477152 SLC24A3Q9HC58 644 aa10.55□□□□□ -0.72
BRCA1-214ENST00000477152 RAB3GAP2Q9H2M9 1393 aa10.55□□□□□ -0.72
BRCA1-214ENST00000477152 ADGRB2O60241 1585 aa10.55□□□□□ -0.72
BRCA1-214ENST00000477152 SAFB2Q14151 953 aaKnown RBP eCLIP10.54□□□□□ -0.721e-6■□□□□ 10.5
BRCA1-214ENST00000477152 VPS72Q15906 364 aa10.54□□□□□ -0.72
BRCA1-214ENST00000477152 RALGAPBQ86X10 1494 aa10.54□□□□□ -0.72
BRCA1-214ENST00000477152 BLMP54132 1417 aaPredicted RBP10.53□□□□□ -0.72
BRCA1-214ENST00000477152 DCAF11Q8TEB1 546 aa10.53□□□□□ -0.72
BRCA1-214ENST00000477152 TRAK1Q9UPV9 953 aa10.53□□□□□ -0.72
BRCA1-214ENST00000477152 ITSN1Q15811 1721 aa10.53□□□□□ -0.72
BRCA1-214ENST00000477152 PLCH1Q4KWH8 1693 aa10.53□□□□□ -0.72
BRCA1-214ENST00000477152 A0A0G2JS52 829 aa10.52□□□□□ -0.72
BRCA1-214ENST00000477152 MYT1Q01538 1121 aa10.52□□□□□ -0.72
BRCA1-214ENST00000477152 NGDNQ8NEJ9 315 aaKnown RBP10.52□□□□□ -0.72
BRCA1-214ENST00000477152 SMYD5Q6GMV2 418 aa10.52□□□□□ -0.73
BRCA1-214ENST00000477152 PMFBP1Q8TBY8 1022 aa10.52□□□□□ -0.73
BRCA1-214ENST00000477152 TULP4Q9NRJ4 1543 aa10.51□□□□□ -0.73
BRCA1-214ENST00000477152 WASLO00401 505 aaPredicted RBP10.51□□□□□ -0.73
BRCA1-214ENST00000477152 PDIA6Q15084 440 aa10.51□□□□□ -0.73
BRCA1-214ENST00000477152 SEPT12Q8IYM1 358 aa10.51□□□□□ -0.73
BRCA1-214ENST00000477152 L3MBTL3Q96JM7 780 aaPredicted RBP10.51□□□□□ -0.73
BRCA1-214ENST00000477152 GLI3P10071 1580 aa10.5□□□□□ -0.73
BRCA1-214ENST00000477152 KRT27Q7Z3Y8 459 aa10.5□□□□□ -0.73
BRCA1-214ENST00000477152 METRNQ9UJH8 293 aa10.5□□□□□ -0.73
BRCA1-214ENST00000477152 COL14A1Q05707 1796 aaKnown RBP10.5□□□□□ -0.73
BRCA1-214ENST00000477152 ABCA3Q99758 1704 aa10.5□□□□□ -0.73
BRCA1-214ENST00000477152 MINK1Q8N4C8 1332 aaPredicted RBP10.5□□□□□ -0.73
BRCA1-214ENST00000477152 ZMYND10O75800 440 aa10.5□□□□□ -0.73
BRCA1-214ENST00000477152 ADGRB1O14514 1584 aa10.49□□□□□ -0.73
BRCA1-214ENST00000477152 BRWD3Q6RI45 1802 aa10.49□□□□□ -0.73
BRCA1-214ENST00000477152 ONECUT3O60422 494 aaPredicted RBP10.49□□□□□ -0.73
BRCA1-214ENST00000477152 BAG6P46379 1132 aa10.49□□□□□ -0.73
BRCA1-214ENST00000477152 CABLES1Q8TDN4 633 aa10.49□□□□□ -0.73
BRCA1-214ENST00000477152 SLC39A7Q92504 469 aa10.48□□□□□ -0.73
BRCA1-214ENST00000477152 HIRIP3Q9BW71 556 aaPredicted RBP10.48□□□□□ -0.73
BRCA1-214ENST00000477152 TRPM3Q9HCF6 1732 aaPredicted RBP10.48□□□□□ -0.73
BRCA1-214ENST00000477152 ALS2Q96Q42 1657 aa10.47□□□□□ -0.73
BRCA1-214ENST00000477152 FAM83GA6ND36 823 aa10.47□□□□□ -0.73
BRCA1-214ENST00000477152 BRPF1P55201 1214 aaPredicted RBP10.47□□□□□ -0.73
BRCA1-214ENST00000477152 MAP3K9P80192 1104 aa10.47□□□□□ -0.73
BRCA1-214ENST00000477152 BTG4Q9NY30 223 aa10.47□□□□□ -0.73
BRCA1-214ENST00000477152 KIAA1210Q9ULL0 1709 aa10.47□□□□□ -0.73
BRCA1-214ENST00000477152 PRDM11Q9NQV5 511 aa10.46□□□□□ -0.73
BRCA1-214ENST00000477152 ATP7BP35670 1465 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms