RNA–Protein interactions for RNA: ENST00000477063.5

SEC22A-205, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22A, Length 759 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-205ENST00000477063 RSPH6AQ9H0K4 717 aa17.44■□□□□ 0.38
SEC22A-205ENST00000477063 PXDNQ92626 1479 aa17.44■□□□□ 0.38
SEC22A-205ENST00000477063 TNS3Q68CZ2 1445 aa17.43■□□□□ 0.38
SEC22A-205ENST00000477063 RNF123Q5XPI4 1314 aa17.43■□□□□ 0.38
SEC22A-205ENST00000477063 AMPHP49418 695 aa17.42■□□□□ 0.38
SEC22A-205ENST00000477063 SLFN5Q08AF3 891 aa17.42■□□□□ 0.38
SEC22A-205ENST00000477063 POTEDQ86YR6 584 aa17.42■□□□□ 0.38
SEC22A-205ENST00000477063 WWC1Q8IX03 1113 aa17.42■□□□□ 0.38
SEC22A-205ENST00000477063 IL16Q14005 1332 aa17.42■□□□□ 0.38
SEC22A-205ENST00000477063 KDRP35968 1356 aa17.41■□□□□ 0.38
SEC22A-205ENST00000477063 EIF4A2Q14240 407 aaKnown RBP17.41■□□□□ 0.38
SEC22A-205ENST00000477063 SLAIN2Q9P270 581 aa17.41■□□□□ 0.38
SEC22A-205ENST00000477063 NHSL1Q5SYE7 1610 aa17.4■□□□□ 0.38
SEC22A-205ENST00000477063 FBLN1P23142 703 aa17.4■□□□□ 0.38
SEC22A-205ENST00000477063 TMPOP42166 694 aaKnown RBP17.4■□□□□ 0.38
SEC22A-205ENST00000477063 LMOD3Q0VAK6 560 aa17.4■□□□□ 0.38
SEC22A-205ENST00000477063 LTBP4Q8N2S1 1624 aa17.39■□□□□ 0.38
SEC22A-205ENST00000477063 HOXC9P31274 260 aa17.39■□□□□ 0.37
SEC22A-205ENST00000477063 CALD1Q05682 793 aaKnown RBP17.39■□□□□ 0.37
SEC22A-205ENST00000477063 DUSP27Q5VZP5 1158 aa17.39■□□□□ 0.37
SEC22A-205ENST00000477063 BRINP3Q76B58 766 aa17.39■□□□□ 0.37
SEC22A-205ENST00000477063 IP6K1Q92551 441 aa17.39■□□□□ 0.37
SEC22A-205ENST00000477063 SALL2Q9Y467 1007 aaPredicted RBP17.39■□□□□ 0.37
SEC22A-205ENST00000477063 SUPT16HQ9Y5B9 1047 aaKnown RBP17.39■□□□□ 0.37
SEC22A-205ENST00000477063 PRKAR2BP31323 418 aa17.38■□□□□ 0.37
SEC22A-205ENST00000477063 HSP90AB2PQ58FF8 381 aa17.38■□□□□ 0.37
SEC22A-205ENST00000477063 SOS2Q07890 1332 aaPredicted RBP17.38■□□□□ 0.37
SEC22A-205ENST00000477063 IGSF1Q8N6C5 1336 aa17.38■□□□□ 0.37
SEC22A-205ENST00000477063 CRYBG1Q9Y4K1 1723 aa17.38■□□□□ 0.37
SEC22A-205ENST00000477063 GCP02774 474 aa17.37■□□□□ 0.37
SEC22A-205ENST00000477063 NFE2L2Q16236 605 aa17.37■□□□□ 0.37
SEC22A-205ENST00000477063 MYH16Q9H6N6 1097 aa17.37■□□□□ 0.37
SEC22A-205ENST00000477063 SPATA31A3Q5VYP0 1347 aa17.37■□□□□ 0.37
SEC22A-205ENST00000477063 PLEKHG2Q9H7P9 1386 aa17.37■□□□□ 0.37
SEC22A-205ENST00000477063 CT47B1P0C2W7 299 aaPredicted RBP17.36■□□□□ 0.37
SEC22A-205ENST00000477063 ARHGEF25Q86VW2 580 aa17.36■□□□□ 0.37
SEC22A-205ENST00000477063 RCAN3Q9UKA8 241 aa17.36■□□□□ 0.37
SEC22A-205ENST00000477063 CDCA7LQ96GN5 454 aa17.35■□□□□ 0.37
SEC22A-205ENST00000477063 FAM208AQ9UK61 1670 aaKnown RBP17.34■□□□□ 0.37
SEC22A-205ENST00000477063 CAMTA1Q9Y6Y1 1673 aa17.33■□□□□ 0.37
SEC22A-205ENST00000477063 NCAPD2Q15021 1401 aa17.33■□□□□ 0.36
SEC22A-205ENST00000477063 CPDO75976 1380 aa17.33■□□□□ 0.36
SEC22A-205ENST00000477063 RIPK4P57078 832 aa17.33■□□□□ 0.36
SEC22A-205ENST00000477063 NUTM2GQ5VZR2 741 aa17.33■□□□□ 0.36
SEC22A-205ENST00000477063 DLG5Q8TDM6 1919 aa17.32■□□□□ 0.36
SEC22A-205ENST00000477063 SULT6B1Q6IMI4 303 aa17.32■□□□□ 0.36
SEC22A-205ENST00000477063 CERKQ8TCT0 537 aa17.32■□□□□ 0.36
SEC22A-205ENST00000477063 TRIM35Q9UPQ4 493 aa17.32■□□□□ 0.36
SEC22A-205ENST00000477063 SOX12O15370 315 aa17.31■□□□□ 0.36
SEC22A-205ENST00000477063 HMOX1P09601 288 aa17.31■□□□□ 0.36
SEC22A-205ENST00000477063 AHDC1Q5TGY3 1603 aaPredicted RBP17.31■□□□□ 0.36
SEC22A-205ENST00000477063 XPCQ01831 940 aaPredicted RBP17.3■□□□□ 0.36
SEC22A-205ENST00000477063 FKBP8Q14318 412 aa17.3■□□□□ 0.36
SEC22A-205ENST00000477063 NEUROD2Q15784 382 aa17.3■□□□□ 0.36
SEC22A-205ENST00000477063 EYA1Q99502 592 aa17.3■□□□□ 0.36
SEC22A-205ENST00000477063 RRP7AQ9Y3A4 280 aaKnown RBP17.3■□□□□ 0.36
SEC22A-205ENST00000477063 HTATSF1O43719 755 aaKnown RBP17.29■□□□□ 0.36
SEC22A-205ENST00000477063 LMOD2Q6P5Q4 547 aa17.29■□□□□ 0.36
SEC22A-205ENST00000477063 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.29■□□□□ 0.36
SEC22A-205ENST00000477063 GAS2L2Q8NHY3 880 aa17.29■□□□□ 0.36
SEC22A-205ENST00000477063 COL18A1P39060 1754 aa17.28■□□□□ 0.36
SEC22A-205ENST00000477063 PHACTR3Q96KR7 559 aa17.28■□□□□ 0.36
SEC22A-205ENST00000477063 SENP3-EIF4A1A0A087X0R7 540 aa17.27■□□□□ 0.36
SEC22A-205ENST00000477063 RRP1P56182 461 aaKnown RBP17.27■□□□□ 0.36
SEC22A-205ENST00000477063 ZNF428Q96B54 188 aa17.27■□□□□ 0.36
SEC22A-205ENST00000477063 LMO7Q8WWI1 1683 aa17.26■□□□□ 0.35
SEC22A-205ENST00000477063 IFT57Q9NWB7 429 aa17.26■□□□□ 0.35
SEC22A-205ENST00000477063 ABCA3Q99758 1704 aa17.26■□□□□ 0.35
SEC22A-205ENST00000477063 ROBO1Q9Y6N7 1651 aa17.26■□□□□ 0.35
SEC22A-205ENST00000477063 GNAI1P63096 354 aa17.25■□□□□ 0.35
SEC22A-205ENST00000477063 SPINK5Q9NQ38 1064 aaPredicted RBP17.25■□□□□ 0.35
SEC22A-205ENST00000477063 AEBP1Q8IUX7 1158 aa17.24■□□□□ 0.35
SEC22A-205ENST00000477063 COL22A1Q8NFW1 1626 aaPredicted RBP17.24■□□□□ 0.35
SEC22A-205ENST00000477063 HAP1P54257 671 aaPredicted RBP17.23■□□□□ 0.35
SEC22A-205ENST00000477063 ERBB3P21860 1342 aa17.22■□□□□ 0.35
SEC22A-205ENST00000477063 ZNF853P0CG23 659 aa17.22■□□□□ 0.35
SEC22A-205ENST00000477063 LRRC59Q96AG4 307 aaKnown RBP17.22■□□□□ 0.35
SEC22A-205ENST00000477063 CFAP44Q96MT7 982 aa17.22■□□□□ 0.35
SEC22A-205ENST00000477063 FANCIQ9NVI1 1328 aa17.21■□□□□ 0.35
SEC22A-205ENST00000477063 AMOTQ4VCS5 1084 aa17.21■□□□□ 0.35
SEC22A-205ENST00000477063 ANKRD24Q8TF21 1146 aa17.21■□□□□ 0.35
SEC22A-205ENST00000477063 DDX17Q92841 729 aaKnown RBP17.21■□□□□ 0.35
SEC22A-205ENST00000477063 BABAM1Q9NWV8 329 aa17.21■□□□□ 0.35
SEC22A-205ENST00000477063 LRRC37A3O60309 1634 aa17.21■□□□□ 0.35
SEC22A-205ENST00000477063 RGPD5Q99666 1765 aa17.2■□□□□ 0.34
SEC22A-205ENST00000477063 TOM1O60784 492 aa17.2■□□□□ 0.34
SEC22A-205ENST00000477063 RTF1Q92541 710 aaKnown RBP17.19■□□□□ 0.34
SEC22A-205ENST00000477063 PPP4R2Q9NY27 417 aa17.19■□□□□ 0.34
SEC22A-205ENST00000477063 RGPD2P0DJD1 1756 aa17.19■□□□□ 0.34
SEC22A-205ENST00000477063 OVOS2A0A0G2JMS6 1433 aa17.19■□□□□ 0.34
SEC22A-205ENST00000477063 MTHFSDQ2M296 383 aaKnown RBP17.18■□□□□ 0.34
SEC22A-205ENST00000477063 NBPF6Q5VWK0 638 aa17.18■□□□□ 0.34
SEC22A-205ENST00000477063 NBPF4Q96M43 638 aa17.18■□□□□ 0.34
SEC22A-205ENST00000477063 KIAA0232Q92628 1395 aa17.17■□□□□ 0.34
SEC22A-205ENST00000477063 MAP3K5Q99683 1374 aa17.17■□□□□ 0.34
SEC22A-205ENST00000477063 ZC3H6P61129 1189 aaKnown RBP17.17■□□□□ 0.34
SEC22A-205ENST00000477063 PLEKHO1Q53GL0 409 aaPredicted RBP17.17■□□□□ 0.34
SEC22A-205ENST00000477063 PELP1Q8IZL8 1130 aaKnown RBP17.17■□□□□ 0.34
SEC22A-205ENST00000477063 LTV1Q96GA3 475 aaPredicted RBP17.17■□□□□ 0.34
SEC22A-205ENST00000477063 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.17■□□□□ 0.343e-9■■■■□ 19.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms