RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 C1QTNF12Q5T7M4 302 aa7.54□□□□□ -1.2
SPTLC3-205ENST00000476791 PACS2Q86VP3 889 aa7.54□□□□□ -1.2
SPTLC3-205ENST00000476791 MAF1Q9H063 256 aa7.54□□□□□ -1.2
SPTLC3-205ENST00000476791 TMX4Q9H1E5 349 aaPredicted RBP7.54□□□□□ -1.2
SPTLC3-205ENST00000476791 CARNS1A5YM72 827 aa7.53□□□□□ -1.2
SPTLC3-205ENST00000476791 TRAK2O60296 914 aa7.53□□□□□ -1.2
SPTLC3-205ENST00000476791 ONECUT3O60422 494 aaPredicted RBP7.53□□□□□ -1.2
SPTLC3-205ENST00000476791 SETDB1Q15047 1291 aa7.53□□□□□ -1.2
SPTLC3-205ENST00000476791 ZKSCAN8Q15776 578 aaPredicted RBP7.53□□□□□ -1.2
SPTLC3-205ENST00000476791 C3orf80F5H4A9 247 aa7.53□□□□□ -1.2
SPTLC3-205ENST00000476791 EXOC5O00471 708 aa7.53□□□□□ -1.2
SPTLC3-205ENST00000476791 NEXNQ0ZGT2 675 aa7.53□□□□□ -1.2
SPTLC3-205ENST00000476791 PUS10Q3MIT2 529 aaKnown RBP7.53□□□□□ -1.2
SPTLC3-205ENST00000476791 CACTIN-AS1Q8N1I8 211 aa7.53□□□□□ -1.2
SPTLC3-205ENST00000476791 TTC30BQ8N4P2 665 aa7.53□□□□□ -1.2
SPTLC3-205ENST00000476791 MORC4Q8TE76 937 aa7.53□□□□□ -1.2
SPTLC3-205ENST00000476791 NRBP1Q9UHY1 535 aa7.53□□□□□ -1.2
SPTLC3-205ENST00000476791 PDE6BP35913 854 aa7.52□□□□□ -1.21
SPTLC3-205ENST00000476791 SSR1P43307 286 aaKnown RBP7.52□□□□□ -1.21
SPTLC3-205ENST00000476791 MCCD1P59942 119 aaPredicted RBP7.52□□□□□ -1.21
SPTLC3-205ENST00000476791 CCT2P78371 535 aaKnown RBP7.52□□□□□ -1.21
SPTLC3-205ENST00000476791 DMTNQ08495 405 aa7.52□□□□□ -1.21
SPTLC3-205ENST00000476791 LMOD3Q0VAK6 560 aa7.52□□□□□ -1.21
SPTLC3-205ENST00000476791 MLECQ14165 292 aa7.52□□□□□ -1.21
SPTLC3-205ENST00000476791 PADI6Q6TGC4 694 aa7.52□□□□□ -1.21
SPTLC3-205ENST00000476791 SPOCK3Q9BQ16 436 aa7.52□□□□□ -1.21
SPTLC3-205ENST00000476791 NOP58Q9Y2X3 529 aaKnown RBP7.52□□□□□ -1.21
SPTLC3-205ENST00000476791 MRVI1Q9Y6F6 885 aa7.52□□□□□ -1.21
SPTLC3-205ENST00000476791 SLC20A2Q08357 652 aa7.52□□□□□ -1.21
SPTLC3-205ENST00000476791 TAF3Q5VWG9 929 aa7.52□□□□□ -1.21
SPTLC3-205ENST00000476791 PTGDRQ13258 359 aa7.51□□□□□ -1.21
SPTLC3-205ENST00000476791 SMYD5Q6GMV2 418 aa7.51□□□□□ -1.21
SPTLC3-205ENST00000476791 ZFRQ96KR1 1074 aaKnown RBP7.51□□□□□ -1.21
SPTLC3-205ENST00000476791 HCSTQ9UBK5 93 aa7.51□□□□□ -1.21
SPTLC3-205ENST00000476791 PNMA3Q9UL41 463 aa7.51□□□□□ -1.21
SPTLC3-205ENST00000476791 KCNA1Q09470 495 aa7.51□□□□□ -1.21
SPTLC3-205ENST00000476791 CT47A1Q5JQC4 288 aaPredicted RBP7.51□□□□□ -1.21
SPTLC3-205ENST00000476791 THSD4Q6ZMP0 1018 aa7.51□□□□□ -1.21
SPTLC3-205ENST00000476791 LAPTM4BQ86VI4 370 aa7.51□□□□□ -1.21
SPTLC3-205ENST00000476791 HELBQ8NG08 1087 aaPredicted RBP7.51□□□□□ -1.21
SPTLC3-205ENST00000476791 ZCRB1Q8TBF4 217 aaKnown RBP7.51□□□□□ -1.21
SPTLC3-205ENST00000476791 PUF60Q9UHX1 559 aaKnown RBP7.51□□□□□ -1.21
SPTLC3-205ENST00000476791 GYS2P54840 703 aa7.5□□□□□ -1.21
SPTLC3-205ENST00000476791 FAM98CQ17RN3 349 aaKnown RBP7.5□□□□□ -1.21
SPTLC3-205ENST00000476791 ZC3H12AQ5D1E8 599 aaKnown RBP7.5□□□□□ -1.21
SPTLC3-205ENST00000476791 NUDT18Q6ZVK8 323 aa7.5□□□□□ -1.21
SPTLC3-205ENST00000476791 ANKK1Q8NFD2 765 aa7.5□□□□□ -1.21
SPTLC3-205ENST00000476791 FAM117AQ9C073 453 aa7.5□□□□□ -1.21
SPTLC3-205ENST00000476791 UBA5Q9GZZ9 404 aa7.5□□□□□ -1.21
SPTLC3-205ENST00000476791 KDM4CQ9H3R0 1056 aa7.5□□□□□ -1.21
SPTLC3-205ENST00000476791 AMOTL2Q9Y2J4 779 aa7.5□□□□□ -1.21
SPTLC3-205ENST00000476791 STK10O94804 968 aaKnown RBP7.5□□□□□ -1.21
SPTLC3-205ENST00000476791 NAT1P18440 290 aa7.5□□□□□ -1.21
SPTLC3-205ENST00000476791 C11orf96Q7Z7L8 435 aa7.5□□□□□ -1.21
SPTLC3-205ENST00000476791 TATDN2Q93075 761 aa7.5□□□□□ -1.21
SPTLC3-205ENST00000476791 RRAGDQ9NQL2 400 aaPredicted RBP7.5□□□□□ -1.21
SPTLC3-205ENST00000476791 BSDC1Q9NW68 430 aaPredicted RBP7.5□□□□□ -1.21
SPTLC3-205ENST00000476791 IGHDP01880 384 aa7.49□□□□□ -1.21
SPTLC3-205ENST00000476791 BCAMP50895 628 aa7.49□□□□□ -1.21
SPTLC3-205ENST00000476791 NBPF26B4DH59 902 aa7.49□□□□□ -1.21
SPTLC3-205ENST00000476791 MICALL1Q8N3F8 863 aa7.49□□□□□ -1.21
SPTLC3-205ENST00000476791 METTL14Q9HCE5 456 aaKnown RBP7.49□□□□□ -1.21
SPTLC3-205ENST00000476791 IRF2BPLQ9H1B7 796 aa7.48□□□□□ -1.21
SPTLC3-205ENST00000476791 SMC3Q9UQE7 1217 aa7.48□□□□□ -1.21
SPTLC3-205ENST00000476791 CCDC194A0A1B0GVG4 234 aa7.47□□□□□ -1.21
SPTLC3-205ENST00000476791 U2SURPO15042 1029 aaKnown RBP7.47□□□□□ -1.21
SPTLC3-205ENST00000476791 CSB-PGBD3P0DP91 1061 aa7.47□□□□□ -1.21
SPTLC3-205ENST00000476791 CALRP27797 417 aaKnown RBP7.47□□□□□ -1.21
SPTLC3-205ENST00000476791 ZRSR2Q15696 482 aaKnown RBP7.47□□□□□ -1.21
SPTLC3-205ENST00000476791 MFSD4BQ5TF39 518 aa7.47□□□□□ -1.21
SPTLC3-205ENST00000476791 ITFG2Q969R8 447 aa7.47□□□□□ -1.21
SPTLC3-205ENST00000476791 PDZRN3Q9UPQ7 1066 aa7.47□□□□□ -1.21
SPTLC3-205ENST00000476791 CFAP69A5D8W1 941 aa7.47□□□□□ -1.21
SPTLC3-205ENST00000476791 UVSSAQ2YD98 709 aa7.47□□□□□ -1.21
SPTLC3-205ENST00000476791 SMC5Q8IY18 1101 aa7.47□□□□□ -1.21
SPTLC3-205ENST00000476791 ACRBPQ8NEB7 543 aa7.47□□□□□ -1.21
SPTLC3-205ENST00000476791 GNL3LQ9NVN8 582 aaKnown RBP7.47□□□□□ -1.21
SPTLC3-205ENST00000476791 MAGEC2Q9UBF1 373 aaPredicted RBP7.47□□□□□ -1.21
SPTLC3-205ENST00000476791 FEZ2Q9UHY8 353 aaPredicted RBP7.47□□□□□ -1.21
SPTLC3-205ENST00000476791 TPX2Q9ULW0 747 aaKnown RBP7.47□□□□□ -1.21
SPTLC3-205ENST00000476791 FCHSD2O94868 740 aa7.46□□□□□ -1.21
SPTLC3-205ENST00000476791 SF3A1Q15459 793 aaKnown RBP7.46□□□□□ -1.21
SPTLC3-205ENST00000476791 FAM161AQ3B820 660 aa7.46□□□□□ -1.21
SPTLC3-205ENST00000476791 WDR78Q5VTH9 848 aa7.46□□□□□ -1.21
SPTLC3-205ENST00000476791 TTC13Q8NBP0 860 aa7.46□□□□□ -1.21
SPTLC3-205ENST00000476791 SOWAHBA6NEL2 793 aa7.46□□□□□ -1.22
SPTLC3-205ENST00000476791 KIF20AO95235 890 aa7.46□□□□□ -1.22
SPTLC3-205ENST00000476791 CAPN2P17655 700 aa7.46□□□□□ -1.22
SPTLC3-205ENST00000476791 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.46□□□□□ -1.22
SPTLC3-205ENST00000476791 CEP83Q9Y592 693 aa7.46□□□□□ -1.22
SPTLC3-205ENST00000476791 PPP4CP60510 307 aa7.45□□□□□ -1.22
SPTLC3-205ENST00000476791 NYAP1Q6ZVC0 841 aa7.45□□□□□ -1.22
SPTLC3-205ENST00000476791 RBM46Q8TBY0 533 aaKnown RBP7.45□□□□□ -1.22
SPTLC3-205ENST00000476791 DRC1Q96MC2 740 aa7.45□□□□□ -1.22
SPTLC3-205ENST00000476791 ARPC5LQ9BPX5 153 aa7.45□□□□□ -1.22
SPTLC3-205ENST00000476791 CCDC94Q9BW85 323 aaPredicted RBP7.45□□□□□ -1.22
SPTLC3-205ENST00000476791 NAT2P11245 290 aa7.45□□□□□ -1.22
SPTLC3-205ENST00000476791 SAMD7Q7Z3H4 446 aa7.45□□□□□ -1.22
SPTLC3-205ENST00000476791 TTC30AQ86WT1 665 aa7.45□□□□□ -1.22
SPTLC3-205ENST00000476791 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms