RNA–Protein interactions for RNA: ENST00000476641.2

CHD6-207, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-207ENST00000476641 FOXC1Q12948 553 aa12.39□□□□□ -0.43
CHD6-207ENST00000476641 HIC1Q14526 733 aa12.39□□□□□ -0.43
CHD6-207ENST00000476641 MYOM3Q5VTT5 1437 aa12.38□□□□□ -0.43
CHD6-207ENST00000476641 ESF1Q9H501 851 aaKnown RBP12.38□□□□□ -0.43
CHD6-207ENST00000476641 AAASQ9NRG9 546 aa12.37□□□□□ -0.43
CHD6-207ENST00000476641 PKD2L1Q9P0L9 805 aa12.37□□□□□ -0.43
CHD6-207ENST00000476641 RTEL1-TNFRSF6BF6WH68 1400 aa12.37□□□□□ -0.43
CHD6-207ENST00000476641 DHX29Q7Z478 1369 aaKnown RBP12.36□□□□□ -0.43
CHD6-207ENST00000476641 ZMYM3Q14202 1370 aa12.35□□□□□ -0.43
CHD6-207ENST00000476641 KIF3BO15066 747 aa12.35□□□□□ -0.43
CHD6-207ENST00000476641 LMOD2Q6P5Q4 547 aa12.35□□□□□ -0.43
CHD6-207ENST00000476641 RDH13Q8NBN7 331 aa12.35□□□□□ -0.43
CHD6-207ENST00000476641 C3P01024 1663 aa12.35□□□□□ -0.43
CHD6-207ENST00000476641 MIA2Q96PC5 1412 aa12.34□□□□□ -0.43
CHD6-207ENST00000476641 CNTLNQ9NXG0 1405 aa12.34□□□□□ -0.43
CHD6-207ENST00000476641 ARHGEF5Q12774 1597 aa12.34□□□□□ -0.43
CHD6-207ENST00000476641 TSPY4P0CV99 314 aa12.33□□□□□ -0.44
CHD6-207ENST00000476641 TSPY10P0CW01 314 aa12.33□□□□□ -0.44
CHD6-207ENST00000476641 MORN1Q5T089 497 aa12.33□□□□□ -0.44
CHD6-207ENST00000476641 UHRF1BP1Q6BDS2 1440 aa12.33□□□□□ -0.44
CHD6-207ENST00000476641 ADGBQ8N7X0 1667 aa12.32□□□□□ -0.44
CHD6-207ENST00000476641 ABCC5O15440 1437 aa12.32□□□□□ -0.44
CHD6-207ENST00000476641 RPIAP49247 311 aa12.32□□□□□ -0.44
CHD6-207ENST00000476641 RBM26Q5T8P6 1007 aaKnown RBP12.32□□□□□ -0.44
CHD6-207ENST00000476641 PPARGC1BQ86YN6 1023 aaKnown RBP12.32□□□□□ -0.44
CHD6-207ENST00000476641 DAXXQ9UER7 740 aaPredicted RBP12.32□□□□□ -0.44
CHD6-207ENST00000476641 FCF1Q9Y324 198 aaKnown RBP12.32□□□□□ -0.44
CHD6-207ENST00000476641 FGD6Q6ZV73 1430 aa12.31□□□□□ -0.44
CHD6-207ENST00000476641 FUT2Q10981 343 aa12.31□□□□□ -0.44
CHD6-207ENST00000476641 CLTCQ00610 1675 aaKnown RBP12.31□□□□□ -0.44
CHD6-207ENST00000476641 PTPRKQ15262 1439 aa12.3□□□□□ -0.44
CHD6-207ENST00000476641 DDX11L8A8MPP1 907 aa12.3□□□□□ -0.44
CHD6-207ENST00000476641 FECHP22830 423 aa12.3□□□□□ -0.44
CHD6-207ENST00000476641 FBXO31Q5XUX0 539 aaPredicted RBP12.3□□□□□ -0.44
CHD6-207ENST00000476641 PREX1Q8TCU6 1659 aa12.29□□□□□ -0.44
CHD6-207ENST00000476641 GNPATO15228 680 aa12.29□□□□□ -0.44
CHD6-207ENST00000476641 NLRP7Q8WX94 980 aa12.29□□□□□ -0.44
CHD6-207ENST00000476641 THAP11Q96EK4 314 aa12.29□□□□□ -0.44
CHD6-207ENST00000476641 PTPN23Q9H3S7 1636 aa12.29□□□□□ -0.44
CHD6-207ENST00000476641 CD2BP2O95400 341 aaKnown RBP12.28□□□□□ -0.44
CHD6-207ENST00000476641 ATP6V1AP38606 617 aa12.28□□□□□ -0.44
CHD6-207ENST00000476641 RRP7BPQ9NSQ0 103 aa12.28□□□□□ -0.44
CHD6-207ENST00000476641 CHIC2Q9UKJ5 165 aa12.28□□□□□ -0.44
CHD6-207ENST00000476641 MAST1Q9Y2H9 1570 aa12.27□□□□□ -0.44
CHD6-207ENST00000476641 FMNL1O95466 1100 aaPredicted RBP12.27□□□□□ -0.45
CHD6-207ENST00000476641 CYP4X1Q8N118 509 aa12.27□□□□□ -0.45
CHD6-207ENST00000476641 FAM160A2Q8N612 972 aaPredicted RBP12.27□□□□□ -0.45
CHD6-207ENST00000476641 TOR4AQ9NXH8 423 aa12.27□□□□□ -0.45
CHD6-207ENST00000476641 SLC27A5Q9Y2P5 690 aa12.27□□□□□ -0.45
CHD6-207ENST00000476641 DAPK1P53355 1430 aa12.27□□□□□ -0.45
CHD6-207ENST00000476641 NPATQ14207 1427 aa12.27□□□□□ -0.45
CHD6-207ENST00000476641 TCOF1Q13428 1488 aaKnown RBP12.27□□□□□ -0.45
CHD6-207ENST00000476641 TESPA1A2RU30 521 aaPredicted RBP12.26□□□□□ -0.45
CHD6-207ENST00000476641 FAM50AQ14320 339 aaKnown RBP12.26□□□□□ -0.45
CHD6-207ENST00000476641 TREML4Q6UXN2 200 aa12.26□□□□□ -0.45
CHD6-207ENST00000476641 CRIPAKQ8N1N5 446 aa12.26□□□□□ -0.45
CHD6-207ENST00000476641 WASHC2CQ9Y4E1 1318 aa12.26□□□□□ -0.45
CHD6-207ENST00000476641 KIF15Q9NS87 1388 aa12.26□□□□□ -0.45
CHD6-207ENST00000476641 MROH2AA6NES4 1674 aa12.26□□□□□ -0.45
CHD6-207ENST00000476641 SMYD5Q6GMV2 418 aa12.25□□□□□ -0.45
CHD6-207ENST00000476641 PRDM9Q9NQV7 894 aa12.25□□□□□ -0.45
CHD6-207ENST00000476641 DACH1Q9UI36 760 aa12.25□□□□□ -0.45
CHD6-207ENST00000476641 SETD1BQ9UPS6 1966 aaKnown RBP12.25□□□□□ -0.45
CHD6-207ENST00000476641 AVPP01185 164 aa12.24□□□□□ -0.45
CHD6-207ENST00000476641 NCOA1Q15788 1441 aa12.24□□□□□ -0.45
CHD6-207ENST00000476641 STRCQ7RTU9 1775 aa12.24□□□□□ -0.45
CHD6-207ENST00000476641 KDM5DQ9BY66 1539 aa12.24□□□□□ -0.45
CHD6-207ENST00000476641 GPR37O15354 613 aa12.23□□□□□ -0.45
CHD6-207ENST00000476641 GCGRP47871 477 aa12.23□□□□□ -0.45
CHD6-207ENST00000476641 MROH1Q8NDA8 1641 aa12.22□□□□□ -0.45
CHD6-207ENST00000476641 MYO3AQ8NEV4 1616 aa12.22□□□□□ -0.45
CHD6-207ENST00000476641 SHANK2Q9UPX8 1470 aa12.22□□□□□ -0.45
CHD6-207ENST00000476641 TNRQ92752 1358 aa12.22□□□□□ -0.45
CHD6-207ENST00000476641 AXIN1O15169 862 aa12.22□□□□□ -0.45
CHD6-207ENST00000476641 SULF1Q8IWU6 871 aa12.22□□□□□ -0.45
CHD6-207ENST00000476641 DNMT1P26358 1616 aaKnown RBP12.22□□□□□ -0.45
CHD6-207ENST00000476641 CAMSAP1Q5T5Y3 1602 aa12.22□□□□□ -0.45
CHD6-207ENST00000476641 ABCC3O15438 1527 aa12.21□□□□□ -0.45
CHD6-207ENST00000476641 PZPP20742 1482 aa12.21□□□□□ -0.45
CHD6-207ENST00000476641 LCE2AQ5TA79 106 aaPredicted RBP12.21□□□□□ -0.45
CHD6-207ENST00000476641 SALL2Q9Y467 1007 aaPredicted RBP12.21□□□□□ -0.45
CHD6-207ENST00000476641 DUOX2Q9NRD8 1548 aa12.21□□□□□ -0.46
CHD6-207ENST00000476641 CROCC2H7BZ55 1655 aa12.2□□□□□ -0.46
CHD6-207ENST00000476641 RNF17Q9BXT8 1623 aaKnown RBP12.2□□□□□ -0.46
CHD6-207ENST00000476641 BRICD5Q6PL45 260 aa12.2□□□□□ -0.46
CHD6-207ENST00000476641 GMPR2Q9P2T1 348 aaKnown RBP12.2□□□□□ -0.46
CHD6-207ENST00000476641 CEP170BQ9Y4F5 1589 aaPredicted RBP12.2□□□□□ -0.46
CHD6-207ENST00000476641 ZBTB24O43167 697 aaPredicted RBP12.19□□□□□ -0.46
CHD6-207ENST00000476641 PHOX2BQ99453 314 aa12.19□□□□□ -0.46
CHD6-207ENST00000476641 TTC24A2A3L6 582 aaPredicted RBP12.18□□□□□ -0.46
CHD6-207ENST00000476641 C11orf95C9JLR9 678 aaPredicted RBP12.18□□□□□ -0.46
CHD6-207ENST00000476641 CTC1Q2NKJ3 1217 aa12.18□□□□□ -0.46
CHD6-207ENST00000476641 RNF19BQ6ZMZ0 732 aa12.18□□□□□ -0.46
CHD6-207ENST00000476641 FBXO41Q8TF61 875 aa12.18□□□□□ -0.46
CHD6-207ENST00000476641 A2ML1A8K2U0 1454 aa12.18□□□□□ -0.46
CHD6-207ENST00000476641 ERBINQ96RT1 1412 aa12.18□□□□□ -0.46
CHD6-207ENST00000476641 ANKRD30AQ9BXX3 1397 aa12.18□□□□□ -0.46
CHD6-207ENST00000476641 MSS51Q4VC12 460 aa12.17□□□□□ -0.46
CHD6-207ENST00000476641 PTPRTO14522 1441 aa12.17□□□□□ -0.46
CHD6-207ENST00000476641 EIF2AK4Q9P2K8 1649 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms