RNA–Protein interactions for RNA: ENST00000476016.1

GABRE-207, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 4

Gene GABRE, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-207ENST00000476016 TNS3Q68CZ2 1445 aa10.84□□□□□ -0.67
GABRE-207ENST00000476016 KDRP35968 1356 aa10.83□□□□□ -0.68
GABRE-207ENST00000476016 GCP02774 474 aa10.83□□□□□ -0.68
GABRE-207ENST00000476016 HSP90AB2PQ58FF8 381 aa10.83□□□□□ -0.68
GABRE-207ENST00000476016 NCAPD2Q15021 1401 aa10.83□□□□□ -0.68
GABRE-207ENST00000476016 ARHGEF10O15013 1369 aa10.82□□□□□ -0.68
GABRE-207ENST00000476016 CPDO75976 1380 aa10.82□□□□□ -0.68
GABRE-207ENST00000476016 EIF4A2Q14240 407 aaKnown RBP10.82□□□□□ -0.68
GABRE-207ENST00000476016 IP6K1Q92551 441 aa10.82□□□□□ -0.68
GABRE-207ENST00000476016 RSPH6AQ9H0K4 717 aa10.82□□□□□ -0.68
GABRE-207ENST00000476016 ROBO1Q9Y6N7 1651 aa10.82□□□□□ -0.68
GABRE-207ENST00000476016 RGPD5Q99666 1765 aa10.81□□□□□ -0.68
GABRE-207ENST00000476016 NPM3O75607 178 aaKnown RBP10.81□□□□□ -0.68
GABRE-207ENST00000476016 PAK3O75914 559 aaPredicted RBP10.81□□□□□ -0.68
GABRE-207ENST00000476016 HOXC9P31274 260 aa10.81□□□□□ -0.68
GABRE-207ENST00000476016 DDX17Q92841 729 aaKnown RBP10.81□□□□□ -0.68
GABRE-207ENST00000476016 PNNQ9H307 717 aaKnown RBP10.81□□□□□ -0.68
GABRE-207ENST00000476016 DLG5Q8TDM6 1919 aa10.81□□□□□ -0.68
GABRE-207ENST00000476016 CAMTA1Q9Y6Y1 1673 aa10.81□□□□□ -0.68
GABRE-207ENST00000476016 IGSF1Q8N6C5 1336 aa10.81□□□□□ -0.68
GABRE-207ENST00000476016 ABCA3Q99758 1704 aa10.81□□□□□ -0.68
GABRE-207ENST00000476016 COL22A1Q8NFW1 1626 aaPredicted RBP10.8□□□□□ -0.68
GABRE-207ENST00000476016 LMO7Q8WWI1 1683 aa10.8□□□□□ -0.68
GABRE-207ENST00000476016 APAF1O14727 1248 aa10.8□□□□□ -0.68
GABRE-207ENST00000476016 U2AF1L5P0DN76 240 aaPredicted RBP10.8□□□□□ -0.68
GABRE-207ENST00000476016 U2AF1Q01081 240 aaKnown RBP eCLIP10.8□□□□□ -0.687e-7■■■■□ 20.1
GABRE-207ENST00000476016 XPCQ01831 940 aaPredicted RBP10.8□□□□□ -0.68
GABRE-207ENST00000476016 TCP11L2Q8N4U5 519 aa10.8□□□□□ -0.68
GABRE-207ENST00000476016 RGPD2P0DJD1 1756 aa10.78□□□□□ -0.68
GABRE-207ENST00000476016 NUTM2GQ5VZR2 741 aa10.78□□□□□ -0.68
GABRE-207ENST00000476016 WWC1Q8IX03 1113 aa10.78□□□□□ -0.68
GABRE-207ENST00000476016 PPM1GO15355 546 aaPredicted RBP10.77□□□□□ -0.69
GABRE-207ENST00000476016 TMPOP42166 694 aaKnown RBP10.77□□□□□ -0.69
GABRE-207ENST00000476016 WDR63Q8IWG1 891 aa10.77□□□□□ -0.69
GABRE-207ENST00000476016 CCDC146Q8IYE0 955 aa10.77□□□□□ -0.69
GABRE-207ENST00000476016 PHACTR3Q96KR7 559 aa10.77□□□□□ -0.69
GABRE-207ENST00000476016 EYA1Q99502 592 aa10.77□□□□□ -0.69
GABRE-207ENST00000476016 TRIM35Q9UPQ4 493 aa10.77□□□□□ -0.69
GABRE-207ENST00000476016 RNF123Q5XPI4 1314 aa10.77□□□□□ -0.69
GABRE-207ENST00000476016 PLEKHG2Q9H7P9 1386 aa10.77□□□□□ -0.69
GABRE-207ENST00000476016 COL16A1Q07092 1604 aaPredicted RBP10.76□□□□□ -0.69
GABRE-207ENST00000476016 AMPHP49418 695 aa10.76□□□□□ -0.69
GABRE-207ENST00000476016 SLFN5Q08AF3 891 aa10.76□□□□□ -0.69
GABRE-207ENST00000476016 AXIN2Q9Y2T1 843 aa10.76□□□□□ -0.69
GABRE-207ENST00000476016 FAM208AQ9UK61 1670 aaKnown RBP10.76□□□□□ -0.69
GABRE-207ENST00000476016 U2SURPO15042 1029 aaKnown RBP10.75□□□□□ -0.69
GABRE-207ENST00000476016 TOM1O60784 492 aa10.75□□□□□ -0.69
GABRE-207ENST00000476016 KCNA4P22459 653 aa10.75□□□□□ -0.69
GABRE-207ENST00000476016 PRKAR2BP31323 418 aa10.75□□□□□ -0.69
GABRE-207ENST00000476016 DUSP27Q5VZP5 1158 aa10.75□□□□□ -0.69
GABRE-207ENST00000476016 LRRC59Q96AG4 307 aaKnown RBP10.75□□□□□ -0.69
GABRE-207ENST00000476016 GOLGA2Q08379 1002 aa10.74□□□□□ -0.69
GABRE-207ENST00000476016 CDCA7LQ96GN5 454 aa10.74□□□□□ -0.69
GABRE-207ENST00000476016 IL16Q14005 1332 aa10.74□□□□□ -0.69
GABRE-207ENST00000476016 NFE2L2Q16236 605 aa10.73□□□□□ -0.69
GABRE-207ENST00000476016 SULT6B1Q6IMI4 303 aa10.73□□□□□ -0.69
GABRE-207ENST00000476016 AEBP1Q8IUX7 1158 aa10.73□□□□□ -0.69
GABRE-207ENST00000476016 SPINK5Q9NQ38 1064 aaPredicted RBP10.73□□□□□ -0.69
GABRE-207ENST00000476016 PHLPP1O60346 1717 aa10.72□□□□□ -0.69
GABRE-207ENST00000476016 E9PSI1 815 aa10.72□□□□□ -0.69
GABRE-207ENST00000476016 HMOX1P09601 288 aa10.72□□□□□ -0.69
GABRE-207ENST00000476016 NBPF6Q5VWK0 638 aa10.72□□□□□ -0.69
GABRE-207ENST00000476016 CABLES1Q8TDN4 633 aa10.72□□□□□ -0.69
GABRE-207ENST00000476016 NBPF4Q96M43 638 aa10.72□□□□□ -0.69
GABRE-207ENST00000476016 ERBB3P21860 1342 aa10.72□□□□□ -0.69
GABRE-207ENST00000476016 SOX12O15370 315 aa10.71□□□□□ -0.69
GABRE-207ENST00000476016 ZNF853P0CG23 659 aa10.71□□□□□ -0.69
GABRE-207ENST00000476016 CERKQ8TCT0 537 aa10.71□□□□□ -0.69
GABRE-207ENST00000476016 KIAA0232Q92628 1395 aa10.71□□□□□ -0.69
GABRE-207ENST00000476016 ADAMTS7Q9UKP4 1686 aa10.7□□□□□ -0.7
GABRE-207ENST00000476016 HTATSF1O43719 755 aaKnown RBP10.7□□□□□ -0.7
GABRE-207ENST00000476016 RIPK4P57078 832 aa10.7□□□□□ -0.7
GABRE-207ENST00000476016 LMOD2Q6P5Q4 547 aa10.7□□□□□ -0.7
GABRE-207ENST00000476016 MAPK8IP3Q9UPT6 1336 aa10.69□□□□□ -0.7
GABRE-207ENST00000476016 ZC3H6P61129 1189 aaKnown RBP10.69□□□□□ -0.7
GABRE-207ENST00000476016 ANKRD24Q8TF21 1146 aa10.69□□□□□ -0.7
GABRE-207ENST00000476016 RRP7AQ9Y3A4 280 aaKnown RBP10.69□□□□□ -0.7
GABRE-207ENST00000476016 VIRMAQ69YN4 1812 aaKnown RBP10.69□□□□□ -0.7
GABRE-207ENST00000476016 COL14A1Q05707 1796 aaKnown RBP10.69□□□□□ -0.7
GABRE-207ENST00000476016 SENP3-EIF4A1A0A087X0R7 540 aa10.68□□□□□ -0.7
GABRE-207ENST00000476016 FAM83GA6ND36 823 aa10.68□□□□□ -0.7
GABRE-207ENST00000476016 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.68□□□□□ -0.72e-8■□□□□ 9.6
GABRE-207ENST00000476016 SALL2Q9Y467 1007 aaPredicted RBP10.68□□□□□ -0.7
GABRE-207ENST00000476016 COL5A2P05997 1499 aaPredicted RBP10.68□□□□□ -0.7
GABRE-207ENST00000476016 LRRC37A3O60309 1634 aa10.67□□□□□ -0.7
GABRE-207ENST00000476016 MTHFSDQ2M296 383 aaKnown RBP10.67□□□□□ -0.7
GABRE-207ENST00000476016 PKD1L3Q7Z443 1732 aa10.67□□□□□ -0.7
GABRE-207ENST00000476016 NEFMP07197 916 aa10.66□□□□□ -0.7
GABRE-207ENST00000476016 CT47B1P0C2W7 299 aaPredicted RBP10.66□□□□□ -0.7
GABRE-207ENST00000476016 LMOD3Q0VAK6 560 aa10.66□□□□□ -0.7
GABRE-207ENST00000476016 GAS2L2Q8NHY3 880 aa10.66□□□□□ -0.7
GABRE-207ENST00000476016 CRB1P82279 1406 aa10.66□□□□□ -0.7
GABRE-207ENST00000476016 CEMIPQ8WUJ3 1361 aa10.65□□□□□ -0.7
GABRE-207ENST00000476016 WDR17Q8IZU2 1322 aa10.65□□□□□ -0.7
GABRE-207ENST00000476016 NWD2Q9ULI1 1742 aa10.65□□□□□ -0.7
GABRE-207ENST00000476016 UBAP1LF5GYI3 381 aa10.65□□□□□ -0.7
GABRE-207ENST00000476016 CHL1O00533 1208 aa10.65□□□□□ -0.7
GABRE-207ENST00000476016 CALD1Q05682 793 aaKnown RBP10.65□□□□□ -0.7
GABRE-207ENST00000476016 NEUROD2Q15784 382 aa10.65□□□□□ -0.7
GABRE-207ENST00000476016 CFAP44Q96MT7 982 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms