RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-208	ENST00000475997	TRIM6-TRIM34	B2RNG4	842 aa		7.35	□□□□□ -1.23
HNRNPU-208	ENST00000475997	MCM4	P33991	863 aa		7.35	□□□□□ -1.23
HNRNPU-208	ENST00000475997	NASP	P49321	788 aa	Predicted RBP	7.35	□□□□□ -1.23
HNRNPU-208	ENST00000475997	FOXD4L5	Q5VV16	416 aa	Predicted RBP	7.35	□□□□□ -1.23
HNRNPU-208	ENST00000475997	FAM184A	Q8NB25	1140 aa		7.35	□□□□□ -1.23
HNRNPU-208	ENST00000475997	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	7.35	□□□□□ -1.23
HNRNPU-208	ENST00000475997	ZNF521	Q96K83	1311 aa		7.35	□□□□□ -1.23
HNRNPU-208	ENST00000475997	KDM5D	Q9BY66	1539 aa		7.34	□□□□□ -1.23
HNRNPU-208	ENST00000475997	TWISTNB	Q3B726	338 aa	Predicted RBP	7.34	□□□□□ -1.23
HNRNPU-208	ENST00000475997	CPLX2	Q6PUV4	134 aa	Known RBP	7.34	□□□□□ -1.23
HNRNPU-208	ENST00000475997	NOL8	Q76FK4	1167 aa	Known RBP	7.34	□□□□□ -1.23
HNRNPU-208	ENST00000475997	NPC1L1	Q9UHC9	1359 aa		7.34	□□□□□ -1.23
HNRNPU-208	ENST00000475997	CHD1L	Q86WJ1	897 aa		7.34	□□□□□ -1.23
HNRNPU-208	ENST00000475997	TBC1D32	Q96NH3	1257 aa		7.34	□□□□□ -1.23
HNRNPU-208	ENST00000475997	STK31	Q9BXU1	1019 aa		7.34	□□□□□ -1.23
HNRNPU-208	ENST00000475997	FCHSD2	O94868	740 aa		7.34	□□□□□ -1.23
HNRNPU-208	ENST00000475997	WAPL	Q7Z5K2	1190 aa		7.34	□□□□□ -1.24
HNRNPU-208	ENST00000475997	WDR7	Q9Y4E6	1490 aa		7.34	□□□□□ -1.24
HNRNPU-208	ENST00000475997	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	7.33	□□□□□ -1.24
HNRNPU-208	ENST00000475997	REC8	O95072	547 aa		7.33	□□□□□ -1.24
HNRNPU-208	ENST00000475997	TRMT2A	Q8IZ69	625 aa	Known RBP	7.33	□□□□□ -1.24
HNRNPU-208	ENST00000475997	SASS6	Q6UVJ0	657 aa		7.33	□□□□□ -1.24
HNRNPU-208	ENST00000475997	TXNDC2	Q86VQ3	553 aa		7.33	□□□□□ -1.24
HNRNPU-208	ENST00000475997	LMOD2	Q6P5Q4	547 aa		7.33	□□□□□ -1.24
HNRNPU-208	ENST00000475997	NGDN	Q8NEJ9	315 aa	Known RBP	7.33	□□□□□ -1.24
HNRNPU-208	ENST00000475997	LTV1	Q96GA3	475 aa	Predicted RBP	7.33	□□□□□ -1.24
HNRNPU-208	ENST00000475997	CFAP65	Q6ZU64	1925 aa	Known RBP	7.32	□□□□□ -1.24
HNRNPU-208	ENST00000475997	MAST1	Q9Y2H9	1570 aa		7.32	□□□□□ -1.24
HNRNPU-208	ENST00000475997	FYB1	O15117	783 aa		7.32	□□□□□ -1.24
HNRNPU-208	ENST00000475997	EIF3J	O75822	258 aa	Known RBP	7.32	□□□□□ -1.24
HNRNPU-208	ENST00000475997	AMPH	P49418	695 aa		7.32	□□□□□ -1.24
HNRNPU-208	ENST00000475997	PLCD4	Q9BRC7	762 aa		7.32	□□□□□ -1.24
HNRNPU-208	ENST00000475997	CD109	Q6YHK3	1445 aa		7.32	□□□□□ -1.24
HNRNPU-208	ENST00000475997	ABCC2	Q92887	1545 aa		7.32	□□□□□ -1.24
HNRNPU-208	ENST00000475997	FBXO31	Q5XUX0	539 aa	Predicted RBP	7.32	□□□□□ -1.24
HNRNPU-208	ENST00000475997	NECTIN2	Q92692	538 aa		7.32	□□□□□ -1.24
HNRNPU-208	ENST00000475997	GCC1	Q96CN9	775 aa		7.32	□□□□□ -1.24
HNRNPU-208	ENST00000475997	ATAD2	Q6PL18	1390 aa		7.32	□□□□□ -1.24
HNRNPU-208	ENST00000475997	LETM1	O95202	739 aa	Predicted RBP	7.32	□□□□□ -1.24
HNRNPU-208	ENST00000475997	MBD3	O95983	291 aa		7.32	□□□□□ -1.24
HNRNPU-208	ENST00000475997	RRS1	Q15050	365 aa	Known RBP	7.32	□□□□□ -1.24
HNRNPU-208	ENST00000475997	CCDC27	Q2M243	656 aa		7.32	□□□□□ -1.24
HNRNPU-208	ENST00000475997	NAT10	Q9H0A0	1025 aa	Known RBP	7.32	□□□□□ -1.24
HNRNPU-208	ENST00000475997	CDC45	O75419	566 aa		7.31	□□□□□ -1.24
HNRNPU-208	ENST00000475997	FAM69C	Q0P6D2	419 aa		7.31	□□□□□ -1.24
HNRNPU-208	ENST00000475997	GIMAP7	Q8NHV1	300 aa		7.31	□□□□□ -1.24
HNRNPU-208	ENST00000475997	RTEL1-TNFRSF6B	F6WH68	1400 aa		7.31	□□□□□ -1.24
HNRNPU-208	ENST00000475997	NFE2L2	Q16236	605 aa		7.31	□□□□□ -1.24
HNRNPU-208	ENST00000475997	GORAB	Q5T7V8	394 aa		7.31	□□□□□ -1.24
HNRNPU-208	ENST00000475997	RILPL2	Q969X0	211 aa		7.31	□□□□□ -1.24
HNRNPU-208	ENST00000475997	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	7.31	□□□□□ -1.24
HNRNPU-208	ENST00000475997	FOXD4L3	Q6VB84	417 aa	Predicted RBP	7.31	□□□□□ -1.24
HNRNPU-208	ENST00000475997	EMILIN1	Q9Y6C2	1016 aa		7.31	□□□□□ -1.24
HNRNPU-208	ENST00000475997	MARCH6	O60337	910 aa		7.31	□□□□□ -1.24
HNRNPU-208	ENST00000475997	ERLIN1	O75477	346 aa		7.31	□□□□□ -1.24
HNRNPU-208	ENST00000475997	AXDND1	Q5T1B0	1012 aa	Predicted RBP	7.31	□□□□□ -1.24
HNRNPU-208	ENST00000475997	SULT6B1	Q6IMI4	303 aa		7.31	□□□□□ -1.24
HNRNPU-208	ENST00000475997	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	7.31	□□□□□ -1.24
HNRNPU-208	ENST00000475997	PRDM15	P57071	1507 aa	Predicted RBP	7.31	□□□□□ -1.24
HNRNPU-208	ENST00000475997	RNF20	Q5VTR2	975 aa		7.3	□□□□□ -1.24
HNRNPU-208	ENST00000475997	BICD2	Q8TD16	824 aa		7.3	□□□□□ -1.24
HNRNPU-208	ENST00000475997	PCMTD1	Q96MG8	357 aa	Predicted RBP	7.3	□□□□□ -1.24
HNRNPU-208	ENST00000475997	ADCY10	Q96PN6	1610 aa		7.3	□□□□□ -1.24
HNRNPU-208	ENST00000475997	ATP10A	O60312	1499 aa		7.3	□□□□□ -1.24
HNRNPU-208	ENST00000475997	CCDC73	Q6ZRK6	1079 aa		7.3	□□□□□ -1.24
HNRNPU-208	ENST00000475997	TTC37	Q6PGP7	1564 aa		7.3	□□□□□ -1.24
HNRNPU-208	ENST00000475997	CALCOCO1	Q9P1Z2	691 aa		7.3	□□□□□ -1.24
HNRNPU-208	ENST00000475997	ANKRD36B	Q8N2N9	1353 aa		7.3	□□□□□ -1.24
HNRNPU-208	ENST00000475997	TRPM1	Q7Z4N2	1603 aa		7.3	□□□□□ -1.24
HNRNPU-208	ENST00000475997	INTS3	Q68E01	1043 aa	Known RBP	7.29	□□□□□ -1.24
HNRNPU-208	ENST00000475997	NME9	Q86XW9	330 aa		7.29	□□□□□ -1.24
HNRNPU-208	ENST00000475997	RUFY2	Q8WXA3	655 aa		7.29	□□□□□ -1.24
HNRNPU-208	ENST00000475997	AKAP17A	Q02040	695 aa	Known RBP	7.29	□□□□□ -1.24
HNRNPU-208	ENST00000475997	HDAC1	Q13547	482 aa	Predicted RBP	7.29	□□□□□ -1.24
HNRNPU-208	ENST00000475997	ALDH1L2	Q3SY69	923 aa		7.29	□□□□□ -1.24
HNRNPU-208	ENST00000475997	MCTP1	Q6DN14	999 aa		7.29	□□□□□ -1.24
HNRNPU-208	ENST00000475997	ZNF428	Q96B54	188 aa		7.29	□□□□□ -1.24
HNRNPU-208	ENST00000475997	ABCC11	Q96J66	1382 aa		7.29	□□□□□ -1.24
HNRNPU-208	ENST00000475997	POLR1A	O95602	1720 aa	Predicted RBP	7.29	□□□□□ -1.24
HNRNPU-208	ENST00000475997	ZKSCAN1	P17029	563 aa	Predicted RBP	7.29	□□□□□ -1.24
HNRNPU-208	ENST00000475997	TSPYL4	Q9UJ04	414 aa		7.29	□□□□□ -1.24
HNRNPU-208	ENST00000475997	PTPRT	O14522	1441 aa		7.29	□□□□□ -1.24
HNRNPU-208	ENST00000475997	CROCC2	H7BZ55	1655 aa		7.29	□□□□□ -1.24
HNRNPU-208	ENST00000475997	LRRFIP1	Q32MZ4	808 aa	Known RBP	7.29	□□□□□ -1.24
HNRNPU-208	ENST00000475997	NSD2	O96028	1365 aa		7.29	□□□□□ -1.24
HNRNPU-208	ENST00000475997	FKBP5	Q13451	457 aa	Predicted RBP	7.29	□□□□□ -1.24
HNRNPU-208	ENST00000475997	UBE2Q2	Q8WVN8	375 aa		7.29	□□□□□ -1.24
HNRNPU-208	ENST00000475997	FAM107B	Q9H098	131 aa		7.29	□□□□□ -1.24
HNRNPU-208	ENST00000475997	PREX2	Q70Z35	1606 aa		7.28	□□□□□ -1.24
HNRNPU-208	ENST00000475997	ASXL2	Q76L83	1435 aa		7.28	□□□□□ -1.24
HNRNPU-208	ENST00000475997	GOLGA6L10	A6NI86	522 aa		7.28	□□□□□ -1.24
HNRNPU-208	ENST00000475997	SLC4A2	P04920	1241 aa		7.28	□□□□□ -1.24
HNRNPU-208	ENST00000475997	CCDC112	Q8NEF3	446 aa		7.28	□□□□□ -1.24
HNRNPU-208	ENST00000475997		K7ELQ4	463 aa	Predicted RBP	7.28	□□□□□ -1.24
HNRNPU-208	ENST00000475997	TRIM29	Q14134	588 aa		7.28	□□□□□ -1.24
HNRNPU-208	ENST00000475997	FAM83G	A6ND36	823 aa		7.28	□□□□□ -1.24
HNRNPU-208	ENST00000475997	NUDT16	Q96DE0	195 aa	Known RBP	7.28	□□□□□ -1.24
HNRNPU-208	ENST00000475997	ANO2	Q9NQ90	1003 aa		7.28	□□□□□ -1.24
HNRNPU-208	ENST00000475997	ERVK-7	P63135	1459 aa		7.28	□□□□□ -1.24
HNRNPU-208	ENST00000475997	ERLIN2	O94905	339 aa		7.27	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms