RNA–Protein interactions for RNA: ENST00000474926.5

PHTF1-209, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 2

Gene PHTF1, Length 4,314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-209ENST00000474926 FOXD4L3Q6VB84 417 aaPredicted RBP9.17□□□□□ -0.94
PHTF1-209ENST00000474926 KCNH5Q8NCM2 988 aa9.17□□□□□ -0.94
PHTF1-209ENST00000474926 DDX54Q8TDD1 881 aaKnown RBP9.17□□□□□ -0.94
PHTF1-209ENST00000474926 PCDHB15Q9Y5E8 787 aa9.17□□□□□ -0.94
PHTF1-209ENST00000474926 BTBD11A6QL63 1104 aa9.17□□□□□ -0.94
PHTF1-209ENST00000474926 PRDM11Q9NQV5 511 aa9.17□□□□□ -0.94
PHTF1-209ENST00000474926 NPC1L1Q9UHC9 1359 aa9.17□□□□□ -0.94
PHTF1-209ENST00000474926 MPRIPQ6WCQ1 1025 aa9.17□□□□□ -0.94
PHTF1-209ENST00000474926 TOM1L2Q6ZVM7 507 aa9.17□□□□□ -0.94
PHTF1-209ENST00000474926 DIAPH3Q9NSV4 1193 aa9.17□□□□□ -0.94
PHTF1-209ENST00000474926 CDC45O75419 566 aa9.17□□□□□ -0.94
PHTF1-209ENST00000474926 LTKP29376 864 aa9.17□□□□□ -0.94
PHTF1-209ENST00000474926 INTS3Q68E01 1043 aaKnown RBP9.17□□□□□ -0.94
PHTF1-209ENST00000474926 MLH3Q9UHC1 1453 aa9.16□□□□□ -0.94
PHTF1-209ENST00000474926 PTMAP06454 111 aaKnown RBP9.16□□□□□ -0.94
PHTF1-209ENST00000474926 MYL6BP14649 208 aa9.16□□□□□ -0.94
PHTF1-209ENST00000474926 CCT4P50991 539 aaKnown RBP9.16□□□□□ -0.94
PHTF1-209ENST00000474926 PRDM15P57071 1507 aaPredicted RBP9.16□□□□□ -0.94
PHTF1-209ENST00000474926 GOLGA6L4A6NEF3 574 aa9.16□□□□□ -0.94
PHTF1-209ENST00000474926 CCDC27Q2M243 656 aa9.16□□□□□ -0.94
PHTF1-209ENST00000474926 ZFYVE16Q7Z3T8 1539 aa9.16□□□□□ -0.94
PHTF1-209ENST00000474926 NFKBIBQ15653 356 aa9.16□□□□□ -0.94
PHTF1-209ENST00000474926 TSPYL6Q8N831 410 aa9.16□□□□□ -0.94
PHTF1-209ENST00000474926 C8orf58Q8NAV2 365 aa9.16□□□□□ -0.94
PHTF1-209ENST00000474926 SRCIN1Q9C0H9 1055 aa9.16□□□□□ -0.94
PHTF1-209ENST00000474926 KDM5DQ9BY66 1539 aa9.16□□□□□ -0.94
PHTF1-209ENST00000474926 KRT24Q2M2I5 525 aa9.15□□□□□ -0.94
PHTF1-209ENST00000474926 TAF7Q15545 349 aaPredicted RBP9.15□□□□□ -0.94
PHTF1-209ENST00000474926 KRT28Q7Z3Y7 464 aa9.15□□□□□ -0.94
PHTF1-209ENST00000474926 EXOC6BQ9Y2D4 811 aa9.15□□□□□ -0.94
PHTF1-209ENST00000474926 TRPM2O94759 1503 aa9.15□□□□□ -0.94
PHTF1-209ENST00000474926 CDC42BPBQ9Y5S2 1711 aa9.15□□□□□ -0.95
PHTF1-209ENST00000474926 GTF2E1P29083 439 aaPredicted RBP9.14□□□□□ -0.95
PHTF1-209ENST00000474926 IL16Q14005 1332 aa9.14□□□□□ -0.95
PHTF1-209ENST00000474926 SMARCA5O60264 1052 aaPredicted RBP9.14□□□□□ -0.95
PHTF1-209ENST00000474926 IL1RAPL2Q9NP60 686 aa9.14□□□□□ -0.95
PHTF1-209ENST00000474926 TBX22Q9Y458 520 aa9.14□□□□□ -0.95
PHTF1-209ENST00000474926 CABP4P57796 275 aa9.14□□□□□ -0.95
PHTF1-209ENST00000474926 ERVK-7P63135 1459 aa9.14□□□□□ -0.95
PHTF1-209ENST00000474926 HSP90AB4PQ58FF6 505 aa9.13□□□□□ -0.95
PHTF1-209ENST00000474926 L1TD1Q5T7N2 865 aaKnown RBP9.13□□□□□ -0.95
PHTF1-209ENST00000474926 CLASRPQ8N2M8 674 aaKnown RBP9.13□□□□□ -0.95
PHTF1-209ENST00000474926 RSPH6AQ9H0K4 717 aa9.13□□□□□ -0.95
PHTF1-209ENST00000474926 HSP90B1P14625 803 aaKnown RBP9.13□□□□□ -0.95
PHTF1-209ENST00000474926 CHMP5Q9NZZ3 219 aa9.13□□□□□ -0.95
PHTF1-209ENST00000474926 SPG7Q9UQ90 795 aa9.13□□□□□ -0.95
PHTF1-209ENST00000474926 SRGAP3O43295 1099 aa9.13□□□□□ -0.95
PHTF1-209ENST00000474926 ZRSR1Q15695 479 aaKnown RBP9.13□□□□□ -0.95
PHTF1-209ENST00000474926 CHRNA2Q15822 529 aa9.13□□□□□ -0.95
PHTF1-209ENST00000474926 RPAP2Q8IXW5 612 aaPredicted RBP9.13□□□□□ -0.95
PHTF1-209ENST00000474926 NEUROD6Q96NK8 337 aa9.13□□□□□ -0.95
PHTF1-209ENST00000474926 RBM42Q9BTD8 480 aaKnown RBP9.13□□□□□ -0.95
PHTF1-209ENST00000474926 MAP3K19Q56UN5 1328 aa9.13□□□□□ -0.95
PHTF1-209ENST00000474926 ANXA1P04083 346 aa9.12□□□□□ -0.95
PHTF1-209ENST00000474926 SIL1Q9H173 461 aa9.12□□□□□ -0.95
PHTF1-209ENST00000474926 TTC21AQ8NDW8 1320 aa9.12□□□□□ -0.95
PHTF1-209ENST00000474926 MAP4K4O95819 1239 aaPredicted RBP9.12□□□□□ -0.95
PHTF1-209ENST00000474926 GSE1Q14687 1217 aa9.12□□□□□ -0.95
PHTF1-209ENST00000474926 MTHFSDQ2M296 383 aaKnown RBP9.12□□□□□ -0.95
PHTF1-209ENST00000474926 LRRCC1Q9C099 1032 aa9.12□□□□□ -0.95
PHTF1-209ENST00000474926 TRIM35Q9UPQ4 493 aa9.12□□□□□ -0.95
PHTF1-209ENST00000474926 FRAT2O75474 233 aaPredicted RBP9.12□□□□□ -0.95
PHTF1-209ENST00000474926 SBNO2Q9Y2G9 1366 aa9.12□□□□□ -0.95
PHTF1-209ENST00000474926 VAMP4O75379 141 aa9.12□□□□□ -0.95
PHTF1-209ENST00000474926 RUFY2Q8WXA3 655 aa9.12□□□□□ -0.95
PHTF1-209ENST00000474926 EYA1Q99502 592 aa9.12□□□□□ -0.95
PHTF1-209ENST00000474926 PLXNC1O60486 1568 aa9.11□□□□□ -0.95
PHTF1-209ENST00000474926 METP08581 1390 aa9.11□□□□□ -0.95
PHTF1-209ENST00000474926 TMEM2Q9UHN6 1383 aa9.11□□□□□ -0.95
PHTF1-209ENST00000474926 GOLGA6L3A6NEY3 463 aa9.11□□□□□ -0.95
PHTF1-209ENST00000474926 IL13P35225 146 aa9.11□□□□□ -0.95
PHTF1-209ENST00000474926 HSPA2P54652 639 aa9.11□□□□□ -0.95
PHTF1-209ENST00000474926 LRRC59Q96AG4 307 aaKnown RBP9.11□□□□□ -0.95
PHTF1-209ENST00000474926 FLIIQ13045 1269 aa9.11□□□□□ -0.95
PHTF1-209ENST00000474926 RNF123Q5XPI4 1314 aa9.11□□□□□ -0.95
PHTF1-209ENST00000474926 FAM177BA6PVY3 158 aa9.11□□□□□ -0.95
PHTF1-209ENST00000474926 PTCD1O75127 700 aaKnown RBP9.11□□□□□ -0.95
PHTF1-209ENST00000474926 DDX49Q9Y6V7 483 aaKnown RBP9.11□□□□□ -0.95
PHTF1-209ENST00000474926 BCORL1Q5H9F3 1711 aa9.11□□□□□ -0.95
PHTF1-209ENST00000474926 CLASP1Q7Z460 1538 aa9.1□□□□□ -0.95
PHTF1-209ENST00000474926 ERC2O15083 957 aa9.1□□□□□ -0.95
PHTF1-209ENST00000474926 ANKRD24Q8TF21 1146 aa9.1□□□□□ -0.95
PHTF1-209ENST00000474926 BLMP54132 1417 aaPredicted RBP9.1□□□□□ -0.95
PHTF1-209ENST00000474926 IQGAP3Q86VI3 1631 aa9.1□□□□□ -0.95
PHTF1-209ENST00000474926 MRPL50Q8N5N7 158 aaKnown RBP9.1□□□□□ -0.95
PHTF1-209ENST00000474926 CABLES1Q8TDN4 633 aa9.1□□□□□ -0.95
PHTF1-209ENST00000474926 TSPOAP1O95153 1857 aa9.09□□□□□ -0.95
PHTF1-209ENST00000474926 NUTM2BA6NNL0 878 aaPredicted RBP9.09□□□□□ -0.95
PHTF1-209ENST00000474926 NUTM2EB1AL46 878 aaPredicted RBP9.09□□□□□ -0.95
PHTF1-209ENST00000474926 ZKSCAN1P17029 563 aaPredicted RBP9.09□□□□□ -0.95
PHTF1-209ENST00000474926 NEK4P51957 841 aa9.09□□□□□ -0.95
PHTF1-209ENST00000474926 NUTM2AQ8IVF1 878 aaPredicted RBP9.09□□□□□ -0.95
PHTF1-209ENST00000474926 AMOTQ4VCS5 1084 aa9.09□□□□□ -0.95
PHTF1-209ENST00000474926 MYOM2P54296 1465 aa9.09□□□□□ -0.95
PHTF1-209ENST00000474926 DDX11L8A8MPP1 907 aa9.09□□□□□ -0.95
PHTF1-209ENST00000474926 NUTM1Q86Y26 1132 aa9.09□□□□□ -0.95
PHTF1-209ENST00000474926 ORAI2Q96SN7 254 aa9.09□□□□□ -0.95
PHTF1-209ENST00000474926 MEIS3Q99687 375 aa9.09□□□□□ -0.95
PHTF1-209ENST00000474926 TOMM22Q9NS69 142 aa9.09□□□□□ -0.95
PHTF1-209ENST00000474926 LRRFIP2Q9Y608 721 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms