RNA–Protein interactions for RNA: ENST00000474843.1

SRRM1-210, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-210ENST00000474843 SEMA3FQ13275 785 aa9.71□□□□□ -0.86
SRRM1-210ENST00000474843 J3QL48 77 aa9.7□□□□□ -0.86
SRRM1-210ENST00000474843 SUPT5HO00267 1087 aaKnown RBP9.7□□□□□ -0.86
SRRM1-210ENST00000474843 GLMNQ92990 594 aa9.7□□□□□ -0.86
SRRM1-210ENST00000474843 PRR20EP86478 221 aa9.69□□□□□ -0.86
SRRM1-210ENST00000474843 PRR20CP86479 221 aa9.69□□□□□ -0.86
SRRM1-210ENST00000474843 PRR20DP86480 221 aa9.69□□□□□ -0.86
SRRM1-210ENST00000474843 PRR20BP86481 221 aa9.69□□□□□ -0.86
SRRM1-210ENST00000474843 PRR20AP86496 221 aa9.69□□□□□ -0.86
SRRM1-210ENST00000474843 SNIP1Q8TAD8 396 aaKnown RBP9.69□□□□□ -0.86
SRRM1-210ENST00000474843 NBPF20Q3BBV1 942 aa9.68□□□□□ -0.86
SRRM1-210ENST00000474843 HDGFL1Q5TGJ6 251 aa9.68□□□□□ -0.86
SRRM1-210ENST00000474843 CDK15Q96Q40 435 aa9.68□□□□□ -0.86
SRRM1-210ENST00000474843 KCTD15Q96SI1 283 aaPredicted RBP9.68□□□□□ -0.86
SRRM1-210ENST00000474843 TOR4AQ9NXH8 423 aa9.68□□□□□ -0.86
SRRM1-210ENST00000474843 WASF2Q9Y6W5 498 aa9.68□□□□□ -0.86
SRRM1-210ENST00000474843 GIGYF1O75420 1035 aaPredicted RBP9.67□□□□□ -0.86
SRRM1-210ENST00000474843 ADH1CP00326 375 aa9.67□□□□□ -0.86
SRRM1-210ENST00000474843 SOX11P35716 441 aa9.67□□□□□ -0.86
SRRM1-210ENST00000474843 CALR3Q96L12 384 aaKnown RBP9.67□□□□□ -0.86
SRRM1-210ENST00000474843 ALG2Q9H553 416 aa9.67□□□□□ -0.86
SRRM1-210ENST00000474843 MAP4K5Q9Y4K4 846 aa9.67□□□□□ -0.86
SRRM1-210ENST00000474843 LCE2BO14633 110 aa9.66□□□□□ -0.86
SRRM1-210ENST00000474843 INTS6LQ5JSJ4 861 aaKnown RBP9.66□□□□□ -0.86
SRRM1-210ENST00000474843 FAM187AA6NFU0 413 aa9.65□□□□□ -0.86
SRRM1-210ENST00000474843 PIK3CDO00329 1044 aa9.65□□□□□ -0.86
SRRM1-210ENST00000474843 SMPD1P17405 629 aa9.65□□□□□ -0.86
SRRM1-210ENST00000474843 GRM5P41594 1212 aa9.65□□□□□ -0.86
SRRM1-210ENST00000474843 CEP126Q9P2H0 1117 aa9.65□□□□□ -0.86
SRRM1-210ENST00000474843 CDV3Q9UKY7 258 aaKnown RBP9.65□□□□□ -0.86
SRRM1-210ENST00000474843 NR3C2P08235 984 aa9.64□□□□□ -0.87
SRRM1-210ENST00000474843 NNTQ13423 1086 aa9.64□□□□□ -0.87
SRRM1-210ENST00000474843 ZNF787Q6DD87 383 aa9.64□□□□□ -0.87
SRRM1-210ENST00000474843 MPNDQ8N594 471 aa9.64□□□□□ -0.87
SRRM1-210ENST00000474843 ZNF592Q92610 1267 aa9.64□□□□□ -0.87
SRRM1-210ENST00000474843 MCCD1P59942 119 aaPredicted RBP9.63□□□□□ -0.87
SRRM1-210ENST00000474843 SLFNL1Q499Z3 407 aa9.63□□□□□ -0.87
SRRM1-210ENST00000474843 PKDCCQ504Y2 493 aa9.63□□□□□ -0.87
SRRM1-210ENST00000474843 RNF135Q8IUD6 432 aa9.63□□□□□ -0.87
SRRM1-210ENST00000474843 UCN2Q96RP3 112 aa9.63□□□□□ -0.87
SRRM1-210ENST00000474843 C1orf115Q9H7X2 142 aa9.63□□□□□ -0.87
SRRM1-210ENST00000474843 ESPNB1AK53 854 aa9.62□□□□□ -0.87
SRRM1-210ENST00000474843 DGAT1O75907 488 aa9.61□□□□□ -0.87
SRRM1-210ENST00000474843 NR5A1Q13285 461 aa9.61□□□□□ -0.87
SRRM1-210ENST00000474843 CCDC116Q8IYX3 515 aa9.61□□□□□ -0.87
SRRM1-210ENST00000474843 HPS1Q92902 700 aa9.61□□□□□ -0.87
SRRM1-210ENST00000474843 ERVH48-1M5A8F1 160 aa9.6□□□□□ -0.87
SRRM1-210ENST00000474843 CCDC85AQ96PX6 553 aaPredicted RBP9.6□□□□□ -0.87
SRRM1-210ENST00000474843 TMPRSS4Q9NRS4 437 aa9.6□□□□□ -0.87
SRRM1-210ENST00000474843 PPP1R26Q5T8A7 1209 aaPredicted RBP9.59□□□□□ -0.87
SRRM1-210ENST00000474843 PCDHB11Q9Y5F2 797 aa9.59□□□□□ -0.87
SRRM1-210ENST00000474843 SKIP12755 728 aa9.58□□□□□ -0.88
SRRM1-210ENST00000474843 TSGA10IPQ3SY00 556 aa9.58□□□□□ -0.88
SRRM1-210ENST00000474843 TBC1D9Q6ZT07 1266 aa9.58□□□□□ -0.88
SRRM1-210ENST00000474843 CCDC82Q8N4S0 544 aa9.58□□□□□ -0.88
SRRM1-210ENST00000474843 WDR4P57081 412 aaKnown RBP9.57□□□□□ -0.88
SRRM1-210ENST00000474843 RNF20Q5VTR2 975 aa9.57□□□□□ -0.88
SRRM1-210ENST00000474843 SEPT12Q8IYM1 358 aa9.57□□□□□ -0.88
SRRM1-210ENST00000474843 PHTF2Q8N3S3 785 aa9.57□□□□□ -0.88
SRRM1-210ENST00000474843 PLPP7Q8NBV4 271 aa9.57□□□□□ -0.88
SRRM1-210ENST00000474843 ITPKCQ96DU7 683 aa9.57□□□□□ -0.88
SRRM1-210ENST00000474843 ARID3AQ99856 593 aa9.57□□□□□ -0.88
SRRM1-210ENST00000474843 ZFAND3Q9H8U3 227 aa9.57□□□□□ -0.88
SRRM1-210ENST00000474843 CYLDQ9NQC7 956 aa9.57□□□□□ -0.88
SRRM1-210ENST00000474843 DOLKQ9UPQ8 538 aa9.57□□□□□ -0.88
SRRM1-210ENST00000474843 OXLD1Q5BKU9 147 aa9.56□□□□□ -0.88
SRRM1-210ENST00000474843 DEPDC4Q8N2C3 294 aa9.56□□□□□ -0.88
SRRM1-210ENST00000474843 ZNF784Q8NCA9 323 aaPredicted RBP9.56□□□□□ -0.88
SRRM1-210ENST00000474843 CCDC97Q96F63 343 aaPredicted RBP9.56□□□□□ -0.88
SRRM1-210ENST00000474843 CDCA7Q9BWT1 371 aaPredicted RBP9.56□□□□□ -0.88
SRRM1-210ENST00000474843 ZIC2O95409 532 aaPredicted RBP9.55□□□□□ -0.88
SRRM1-210ENST00000474843 TIMP2P16035 220 aa9.55□□□□□ -0.88
SRRM1-210ENST00000474843 DHX9Q08211 1270 aaKnown RBP9.55□□□□□ -0.88
SRRM1-210ENST00000474843 PALM3A6NDB9 673 aaPredicted RBP9.54□□□□□ -0.88
SRRM1-210ENST00000474843 USP17L5A8MUK1 530 aa9.54□□□□□ -0.88
SRRM1-210ENST00000474843 TFIP11Q9UBB9 837 aaKnown RBP9.54□□□□□ -0.88
SRRM1-210ENST00000474843 EMILIN1Q9Y6C2 1016 aa9.54□□□□□ -0.88
SRRM1-210ENST00000474843 UNC13AQ9UPW8 1703 aa9.53□□□□□ -0.88
SRRM1-210ENST00000474843 ATP9BO43861 1147 aa9.53□□□□□ -0.88
SRRM1-210ENST00000474843 SCTRP47872 440 aa9.53□□□□□ -0.88
SRRM1-210ENST00000474843 MYT1Q01538 1121 aa9.53□□□□□ -0.88
SRRM1-210ENST00000474843 PPP1R12CQ9BZL4 782 aa9.53□□□□□ -0.88
SRRM1-210ENST00000474843 PGPEP1Q9NXJ5 209 aa9.53□□□□□ -0.88
SRRM1-210ENST00000474843 RFX1P22670 979 aa9.52□□□□□ -0.89
SRRM1-210ENST00000474843 CBLBQ13191 982 aa9.52□□□□□ -0.89
SRRM1-210ENST00000474843 NCOA4Q13772 614 aa9.52□□□□□ -0.89
SRRM1-210ENST00000474843 KLF16Q9BXK1 252 aaPredicted RBP9.52□□□□□ -0.89
SRRM1-210ENST00000474843 USP17L3A6NCW0 530 aa9.51□□□□□ -0.89
SRRM1-210ENST00000474843 USP17L4A6NCW7 530 aa9.51□□□□□ -0.89
SRRM1-210ENST00000474843 ST8SIA5O15466 376 aa9.51□□□□□ -0.89
SRRM1-210ENST00000474843 LMOD1P29536 600 aaPredicted RBP9.51□□□□□ -0.89
SRRM1-210ENST00000474843 USP17L2Q6R6M4 530 aa9.51□□□□□ -0.89
SRRM1-210ENST00000474843 USP17L1Q7RTZ2 530 aa9.51□□□□□ -0.89
SRRM1-210ENST00000474843 NFATC2IPQ8NCF5 419 aa9.51□□□□□ -0.89
SRRM1-210ENST00000474843 CHIC2Q9UKJ5 165 aa9.51□□□□□ -0.89
SRRM1-210ENST00000474843 MAFBQ9Y5Q3 323 aaPredicted RBP9.51□□□□□ -0.89
SRRM1-210ENST00000474843 CAPN5O15484 640 aaPredicted RBP9.5□□□□□ -0.89
SRRM1-210ENST00000474843 LILRA1O75019 489 aa9.5□□□□□ -0.89
SRRM1-210ENST00000474843 CFAP70Q5T0N1 1121 aa9.5□□□□□ -0.89
SRRM1-210ENST00000474843 SERPINA10Q9UK55 444 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms