RNA–Protein interactions for RNA: ENST00000474743.5

SH3D19-206, Transcript of SH3 domain containing 19, humanhuman

TSL 4

Gene SH3D19, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-206ENST00000474743 PLEKHG3A1L390 1219 aa11.94□□□□□ -0.5
SH3D19-206ENST00000474743 MNX1P50219 401 aaPredicted RBP11.94□□□□□ -0.5
SH3D19-206ENST00000474743 NBPF8Q3BBV2 869 aa11.94□□□□□ -0.5
SH3D19-206ENST00000474743 CABP2Q9NPB3 220 aa11.94□□□□□ -0.5
SH3D19-206ENST00000474743 AKAP12Q02952 1782 aa11.94□□□□□ -0.5
SH3D19-206ENST00000474743 BCL9LQ86UU0 1499 aa11.94□□□□□ -0.5
SH3D19-206ENST00000474743 CABLES1Q8TDN4 633 aa11.93□□□□□ -0.5
SH3D19-206ENST00000474743 NRAPQ86VF7 1730 aa11.93□□□□□ -0.5
SH3D19-206ENST00000474743 NRKQ7Z2Y5 1582 aa11.92□□□□□ -0.5
SH3D19-206ENST00000474743 UNC5CLQ8IV45 518 aa11.92□□□□□ -0.5
SH3D19-206ENST00000474743 PCGF6Q9BYE7 350 aa11.92□□□□□ -0.5
SH3D19-206ENST00000474743 USP6P35125 1406 aa11.92□□□□□ -0.5
SH3D19-206ENST00000474743 MON2Q7Z3U7 1717 aa11.91□□□□□ -0.5
SH3D19-206ENST00000474743 SLC24A1O60721 1099 aa11.9□□□□□ -0.5
SH3D19-206ENST00000474743 GLI3P10071 1580 aa11.9□□□□□ -0.5
SH3D19-206ENST00000474743 PRDM11Q9NQV5 511 aa11.9□□□□□ -0.5
SH3D19-206ENST00000474743 BMP2KQ9NSY1 1161 aaPredicted RBP11.9□□□□□ -0.5
SH3D19-206ENST00000474743 ABTB2Q8N961 1025 aa11.89□□□□□ -0.51
SH3D19-206ENST00000474743 GJD4Q96KN9 370 aaPredicted RBP11.89□□□□□ -0.51
SH3D19-206ENST00000474743 CABP1Q9NZU7 370 aa11.89□□□□□ -0.51
SH3D19-206ENST00000474743 TIMELESSQ9UNS1 1208 aa11.89□□□□□ -0.51
SH3D19-206ENST00000474743 CCDC9Q9Y3X0 531 aaKnown RBP11.89□□□□□ -0.51
SH3D19-206ENST00000474743 PIK3C2AO00443 1686 aa11.89□□□□□ -0.51
SH3D19-206ENST00000474743 SEC24BO95487 1268 aa11.88□□□□□ -0.51
SH3D19-206ENST00000474743 VPS72Q15906 364 aa11.87□□□□□ -0.51
SH3D19-206ENST00000474743 NLRP13Q86W25 1043 aa11.87□□□□□ -0.51
SH3D19-206ENST00000474743 KIAA0232Q92628 1395 aa11.87□□□□□ -0.51
SH3D19-206ENST00000474743 NINLQ9Y2I6 1382 aa11.87□□□□□ -0.51
SH3D19-206ENST00000474743 USP19O94966 1318 aa11.86□□□□□ -0.51
SH3D19-206ENST00000474743 SLIT3O75094 1523 aa11.86□□□□□ -0.51
SH3D19-206ENST00000474743 FAM83GA6ND36 823 aa11.86□□□□□ -0.51
SH3D19-206ENST00000474743 NUTM2GQ5VZR2 741 aa11.86□□□□□ -0.51
SH3D19-206ENST00000474743 CCER1Q8TC90 406 aaPredicted RBP11.86□□□□□ -0.51
SH3D19-206ENST00000474743 BTG4Q9NY30 223 aa11.86□□□□□ -0.51
SH3D19-206ENST00000474743 CPDO75976 1380 aa11.86□□□□□ -0.51
SH3D19-206ENST00000474743 KTN1Q86UP2 1357 aaKnown RBP11.86□□□□□ -0.51
SH3D19-206ENST00000474743 USP47Q96K76 1375 aa11.86□□□□□ -0.51
SH3D19-206ENST00000474743 TTC21AQ8NDW8 1320 aa11.86□□□□□ -0.51
SH3D19-206ENST00000474743 EP400Q96L91 3159 aa11.85□□□□□ -0.51
SH3D19-206ENST00000474743 A0A0G2JS52 829 aa11.85□□□□□ -0.51
SH3D19-206ENST00000474743 MYT1Q01538 1121 aa11.85□□□□□ -0.51
SH3D19-206ENST00000474743 SLAIN1Q8ND83 568 aa11.85□□□□□ -0.51
SH3D19-206ENST00000474743 USP54Q70EL1 1684 aa11.84□□□□□ -0.51
SH3D19-206ENST00000474743 LMO7Q8WWI1 1683 aa11.84□□□□□ -0.51
SH3D19-206ENST00000474743 BRWD3Q6RI45 1802 aa11.84□□□□□ -0.51
SH3D19-206ENST00000474743 TIE1P35590 1138 aa11.84□□□□□ -0.51
SH3D19-206ENST00000474743 HDGFL2Q7Z4V5 671 aaPredicted RBP11.84□□□□□ -0.51
SH3D19-206ENST00000474743 COLQQ9Y215 455 aaPredicted RBP11.84□□□□□ -0.51
SH3D19-206ENST00000474743 CPSF1Q10570 1443 aaKnown RBP11.84□□□□□ -0.51
SH3D19-206ENST00000474743 SSH2Q76I76 1423 aa11.84□□□□□ -0.51
SH3D19-206ENST00000474743 NLRP6P59044 892 aa11.83□□□□□ -0.52
SH3D19-206ENST00000474743 ZC3H6P61129 1189 aaKnown RBP11.83□□□□□ -0.52
SH3D19-206ENST00000474743 TMC1Q8TDI8 760 aa11.83□□□□□ -0.52
SH3D19-206ENST00000474743 UPF1Q92900 1129 aaKnown RBP eCLIP11.83□□□□□ -0.52
SH3D19-206ENST00000474743 PUS7Q96PZ0 661 aaKnown RBP11.83□□□□□ -0.52
SH3D19-206ENST00000474743 TMEM121BQ9BXQ6 578 aaPredicted RBP11.83□□□□□ -0.52
SH3D19-206ENST00000474743 ST20-MTHFSA0A0A6YYL1 179 aa11.82□□□□□ -0.52
SH3D19-206ENST00000474743 TERF2IPQ9NYB0 399 aa11.82□□□□□ -0.52
SH3D19-206ENST00000474743 EDC4Q6P2E9 1401 aaKnown RBP11.82□□□□□ -0.52
SH3D19-206ENST00000474743 THSD7AQ9UPZ6 1657 aa11.81□□□□□ -0.52
SH3D19-206ENST00000474743 ABCC6O95255 1503 aa11.81□□□□□ -0.52
SH3D19-206ENST00000474743 GCP02774 474 aa11.81□□□□□ -0.52
SH3D19-206ENST00000474743 TMF1P82094 1093 aa11.81□□□□□ -0.52
SH3D19-206ENST00000474743 CHRNA2Q15822 529 aa11.81□□□□□ -0.52
SH3D19-206ENST00000474743 CDCA8Q53HL2 280 aa11.81□□□□□ -0.52
SH3D19-206ENST00000474743 KCNH5Q8NCM2 988 aa11.81□□□□□ -0.52
SH3D19-206ENST00000474743 STRN4Q9NRL3 753 aa11.81□□□□□ -0.52
SH3D19-206ENST00000474743 SPATA31A5Q5VU36 1347 aa11.81□□□□□ -0.52
SH3D19-206ENST00000474743 TTC21BQ7Z4L5 1316 aa11.81□□□□□ -0.52
SH3D19-206ENST00000474743 SPATA31A7Q8IWB4 1347 aa11.81□□□□□ -0.52
SH3D19-206ENST00000474743 EVA1CP58658 441 aa11.8□□□□□ -0.52
SH3D19-206ENST00000474743 SEPT12Q8IYM1 358 aa11.8□□□□□ -0.52
SH3D19-206ENST00000474743 KIF12Q96FN5 646 aa11.8□□□□□ -0.52
SH3D19-206ENST00000474743 CD163L1Q9NR16 1453 aa11.8□□□□□ -0.52
SH3D19-206ENST00000474743 A0A1W2PP64 1363 aa11.79□□□□□ -0.52
SH3D19-206ENST00000474743 CAMTA1Q9Y6Y1 1673 aa11.79□□□□□ -0.52
SH3D19-206ENST00000474743 COL5A2P05997 1499 aaPredicted RBP11.79□□□□□ -0.52
SH3D19-206ENST00000474743 SPDYE4A6NLX3 237 aa11.79□□□□□ -0.52
SH3D19-206ENST00000474743 FAM98CQ17RN3 349 aaKnown RBP11.79□□□□□ -0.52
SH3D19-206ENST00000474743 TESK2Q96S53 571 aa11.79□□□□□ -0.52
SH3D19-206ENST00000474743 TSPYL2Q9H2G4 693 aaPredicted RBP11.79□□□□□ -0.52
SH3D19-206ENST00000474743 NFAT5O94916 1531 aa11.79□□□□□ -0.52
SH3D19-206ENST00000474743 LTN1O94822 1766 aa11.79□□□□□ -0.52
SH3D19-206ENST00000474743 AATKQ6ZMQ8 1374 aa11.79□□□□□ -0.52
SH3D19-206ENST00000474743 ZBTB7CA1YPR0 619 aa11.78□□□□□ -0.52
SH3D19-206ENST00000474743 CCDC125Q86Z20 511 aa11.78□□□□□ -0.52
SH3D19-206ENST00000474743 WNK3Q9BYP7 1800 aa11.78□□□□□ -0.52
SH3D19-206ENST00000474743 SPATA31A1Q5TZJ5 1347 aa11.78□□□□□ -0.52
SH3D19-206ENST00000474743 BLMP54132 1417 aaPredicted RBP11.77□□□□□ -0.52
SH3D19-206ENST00000474743 ONECUT3O60422 494 aaPredicted RBP11.77□□□□□ -0.53
SH3D19-206ENST00000474743 KRT27Q7Z3Y8 459 aa11.77□□□□□ -0.53
SH3D19-206ENST00000474743 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.77□□□□□ -0.53
SH3D19-206ENST00000474743 USP31Q70CQ4 1352 aa11.77□□□□□ -0.53
SH3D19-206ENST00000474743 ANKRD36BQ8N2N9 1353 aa11.77□□□□□ -0.53
SH3D19-206ENST00000474743 RGPD1P0DJD0 1748 aa11.77□□□□□ -0.53
SH3D19-206ENST00000474743 CRB1P82279 1406 aa11.77□□□□□ -0.53
SH3D19-206ENST00000474743 KIF20BQ96Q89 1820 aa11.76□□□□□ -0.53
SH3D19-206ENST00000474743 MYOM1P52179 1685 aa11.76□□□□□ -0.53
SH3D19-206ENST00000474743 SOX12O15370 315 aa11.76□□□□□ -0.53
SH3D19-206ENST00000474743 SF3B2Q13435 895 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms