RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 NSD2O96028 1365 aa10.14□□□□□ -0.79
CCDC93-208ENST00000474546 MARF1Q9Y4F3 1742 aaKnown RBP10.13□□□□□ -0.79
CCDC93-208ENST00000474546 SYCP2Q9BX26 1530 aa10.13□□□□□ -0.79
CCDC93-208ENST00000474546 CNGB1Q14028 1251 aaPredicted RBP10.13□□□□□ -0.79
CCDC93-208ENST00000474546 RTN4Q9NQC3 1192 aaKnown RBP10.13□□□□□ -0.79
CCDC93-208ENST00000474546 MYOM1P52179 1685 aa10.12□□□□□ -0.79
CCDC93-208ENST00000474546 TPM2P07951 284 aa10.12□□□□□ -0.79
CCDC93-208ENST00000474546 RGS3P49796 1198 aa10.12□□□□□ -0.79
CCDC93-208ENST00000474546 CFAP53Q96M91 514 aa10.12□□□□□ -0.79
CCDC93-208ENST00000474546 GBP4Q96PP9 640 aa10.12□□□□□ -0.79
CCDC93-208ENST00000474546 FSD2A1L4K1 749 aa10.11□□□□□ -0.79
CCDC93-208ENST00000474546 ONECUT3O60422 494 aaPredicted RBP10.11□□□□□ -0.79
CCDC93-208ENST00000474546 HSP90AA1P07900 732 aaKnown RBP10.11□□□□□ -0.79
CCDC93-208ENST00000474546 TERF1P54274 439 aa10.11□□□□□ -0.79
CCDC93-208ENST00000474546 JMYQ8N9B5 988 aa10.11□□□□□ -0.79
CCDC93-208ENST00000474546 CAMKK2Q96RR4 588 aa10.11□□□□□ -0.79
CCDC93-208ENST00000474546 TMEM2Q9UHN6 1383 aa10.11□□□□□ -0.79
CCDC93-208ENST00000474546 TNS1Q9HBL0 1735 aaKnown RBP10.1□□□□□ -0.79
CCDC93-208ENST00000474546 ADGRB2O60241 1585 aa10.1□□□□□ -0.79
CCDC93-208ENST00000474546 GOLGB1Q14789 3259 aaKnown RBP10.1□□□□□ -0.79
CCDC93-208ENST00000474546 GOLGA6L22H0YM25 854 aa10.1□□□□□ -0.79
CCDC93-208ENST00000474546 UNC5CLQ8IV45 518 aa10.1□□□□□ -0.79
CCDC93-208ENST00000474546 HSCBQ8IWL3 235 aa10.1□□□□□ -0.79
CCDC93-208ENST00000474546 ZNF428Q96B54 188 aa10.1□□□□□ -0.79
CCDC93-208ENST00000474546 TRIM44Q96DX7 344 aaPredicted RBP10.1□□□□□ -0.79
CCDC93-208ENST00000474546 MAP7D2Q96T17 732 aa10.1□□□□□ -0.79
CCDC93-208ENST00000474546 SYT17Q9BSW7 474 aa10.1□□□□□ -0.79
CCDC93-208ENST00000474546 ANTXR1Q9H6X2 564 aa10.1□□□□□ -0.79
CCDC93-208ENST00000474546 IBTKQ9P2D0 1353 aaPredicted RBP10.1□□□□□ -0.79
CCDC93-208ENST00000474546 NRKQ7Z2Y5 1582 aa10.09□□□□□ -0.79
CCDC93-208ENST00000474546 TNS2Q63HR2 1409 aa10.09□□□□□ -0.79
CCDC93-208ENST00000474546 DLC1Q96QB1 1528 aa10.09□□□□□ -0.79
CCDC93-208ENST00000474546 MCM4P33991 863 aa10.09□□□□□ -0.79
CCDC93-208ENST00000474546 NBPF1Q3BBV0 1214 aa10.09□□□□□ -0.79
CCDC93-208ENST00000474546 C20orf194Q5TEA3 1177 aa10.09□□□□□ -0.79
CCDC93-208ENST00000474546 MTERF4Q7Z6M4 381 aaKnown RBP10.09□□□□□ -0.79
CCDC93-208ENST00000474546 RUNDC1Q96C34 613 aa10.09□□□□□ -0.79
CCDC93-208ENST00000474546 ABCC11Q96J66 1382 aa10.09□□□□□ -0.79
CCDC93-208ENST00000474546 ERVK-7P63135 1459 aa10.09□□□□□ -0.79
CCDC93-208ENST00000474546 DCCP43146 1447 aa10.08□□□□□ -0.8
CCDC93-208ENST00000474546 SNX21Q969T3 373 aa10.08□□□□□ -0.8
CCDC93-208ENST00000474546 GPBP1L1Q9HC44 474 aaPredicted RBP10.08□□□□□ -0.8
CCDC93-208ENST00000474546 RREB1Q92766 1687 aa10.08□□□□□ -0.8
CCDC93-208ENST00000474546 USP19O94966 1318 aa10.07□□□□□ -0.8
CCDC93-208ENST00000474546 COL22A1Q8NFW1 1626 aaPredicted RBP10.07□□□□□ -0.8
CCDC93-208ENST00000474546 KIF3BO15066 747 aa10.07□□□□□ -0.8
CCDC93-208ENST00000474546 HDAC1Q13547 482 aaPredicted RBP10.07□□□□□ -0.8
CCDC93-208ENST00000474546 RGL3Q3MIN7 710 aa10.07□□□□□ -0.8
CCDC93-208ENST00000474546 HS1BP3Q53T59 392 aa10.07□□□□□ -0.8
CCDC93-208ENST00000474546 IPO8O15397 1037 aaKnown RBP10.06□□□□□ -0.8
CCDC93-208ENST00000474546 HSP90AA2PQ14568 343 aaPredicted RBP10.06□□□□□ -0.8
CCDC93-208ENST00000474546 DDX19BQ9UMR2 479 aa10.06□□□□□ -0.8
CCDC93-208ENST00000474546 NUP188Q5SRE5 1749 aa10.06□□□□□ -0.8
CCDC93-208ENST00000474546 IL16Q14005 1332 aa10.06□□□□□ -0.8
CCDC93-208ENST00000474546 KIF1BO60333 1816 aa10.05□□□□□ -0.8
CCDC93-208ENST00000474546 APAF1O14727 1248 aa10.05□□□□□ -0.8
CCDC93-208ENST00000474546 GPR162Q16538 588 aa10.05□□□□□ -0.8
CCDC93-208ENST00000474546 ZKSCAN2Q63HK3 967 aa10.05□□□□□ -0.8
CCDC93-208ENST00000474546 WWC1Q8IX03 1113 aa10.05□□□□□ -0.8
CCDC93-208ENST00000474546 KLHL34Q8N239 644 aa10.05□□□□□ -0.8
CCDC93-208ENST00000474546 FHDC1Q9C0D6 1143 aaPredicted RBP10.05□□□□□ -0.8
CCDC93-208ENST00000474546 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.05□□□□□ -0.8
CCDC93-208ENST00000474546 CFAP65Q6ZU64 1925 aaKnown RBP10.04□□□□□ -0.8
CCDC93-208ENST00000474546 TRAK2O60296 914 aa10.04□□□□□ -0.8
CCDC93-208ENST00000474546 SLC4A3P48751 1232 aa10.04□□□□□ -0.8
CCDC93-208ENST00000474546 RARSP54136 660 aaKnown RBP10.04□□□□□ -0.8
CCDC93-208ENST00000474546 CCDC173Q0VFZ6 552 aa10.04□□□□□ -0.8
CCDC93-208ENST00000474546 MVPQ14764 893 aaKnown RBP10.04□□□□□ -0.8
CCDC93-208ENST00000474546 KLRG1Q96E93 195 aa10.04□□□□□ -0.8
CCDC93-208ENST00000474546 TBC1D2Q9BYX2 928 aa10.04□□□□□ -0.8
CCDC93-208ENST00000474546 C22orf23Q9BZE7 217 aa10.04□□□□□ -0.8
CCDC93-208ENST00000474546 NRXN1Q9ULB1 1477 aa10.04□□□□□ -0.8
CCDC93-208ENST00000474546 RBM25P49756 843 aaKnown RBP10.03□□□□□ -0.8
CCDC93-208ENST00000474546 FTSJ3Q8IY81 847 aaKnown RBP10.03□□□□□ -0.8
CCDC93-208ENST00000474546 NAP1L5Q96NT1 182 aaPredicted RBP10.03□□□□□ -0.8
CCDC93-208ENST00000474546 POGKQ9P215 609 aa10.03□□□□□ -0.8
CCDC93-208ENST00000474546 ESPNB1AK53 854 aa10.02□□□□□ -0.81
CCDC93-208ENST00000474546 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.02□□□□□ -0.81
CCDC93-208ENST00000474546 SMC5Q8IY18 1101 aa10.02□□□□□ -0.81
CCDC93-208ENST00000474546 GRPEL1Q9HAV7 217 aa10.02□□□□□ -0.81
CCDC93-208ENST00000474546 CLTCL1P53675 1640 aa10.02□□□□□ -0.81
CCDC93-208ENST00000474546 RPGRIP1LQ68CZ1 1315 aa10.02□□□□□ -0.81
CCDC93-208ENST00000474546 SLIT2O94813 1529 aa10.02□□□□□ -0.81
CCDC93-208ENST00000474546 IFT172Q9UG01 1749 aa10.02□□□□□ -0.81
CCDC93-208ENST00000474546 MST1RQ04912 1400 aa10.01□□□□□ -0.81
CCDC93-208ENST00000474546 ATP10DQ9P241 1426 aa10.01□□□□□ -0.81
CCDC93-208ENST00000474546 IGHDP01880 384 aa10.01□□□□□ -0.81
CCDC93-208ENST00000474546 XRCC6P12956 609 aaKnown RBP eCLIP10.01□□□□□ -0.81
CCDC93-208ENST00000474546 MCM5P33992 734 aa10.01□□□□□ -0.81
CCDC93-208ENST00000474546 CALD1Q05682 793 aaKnown RBP10.01□□□□□ -0.81
CCDC93-208ENST00000474546 CLEC17AQ6ZS10 378 aa10.01□□□□□ -0.81
CCDC93-208ENST00000474546 DZIP1LQ8IYY4 767 aaKnown RBP10.01□□□□□ -0.81
CCDC93-208ENST00000474546 DDX17Q92841 729 aaKnown RBP10.01□□□□□ -0.81
CCDC93-208ENST00000474546 SLKQ9H2G2 1235 aaPredicted RBP10.01□□□□□ -0.81
CCDC93-208ENST00000474546 PDCL3Q9H2J4 239 aa10.01□□□□□ -0.81
CCDC93-208ENST00000474546 STAG3Q9UJ98 1225 aa10.01□□□□□ -0.81
CCDC93-208ENST00000474546 LMTK2Q8IWU2 1503 aa10.01□□□□□ -0.81
CCDC93-208ENST00000474546 ARHGAP31Q2M1Z3 1444 aa10□□□□□ -0.81
CCDC93-208ENST00000474546 WDR90Q96KV7 1748 aa10□□□□□ -0.81
CCDC93-208ENST00000474546 BCAR3O75815 825 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms