RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 MTRQ99707 1265 aa10□□□□□ -0.81
GPNMB-209ENST00000474157 COL17A1Q9UMD9 1497 aaPredicted RBP9.99□□□□□ -0.81
GPNMB-209ENST00000474157 MSS51Q4VC12 460 aa9.99□□□□□ -0.81
GPNMB-209ENST00000474157 ABCA5Q8WWZ7 1642 aa9.98□□□□□ -0.81
GPNMB-209ENST00000474157 POM121CA8CG34 1229 aa9.98□□□□□ -0.81
GPNMB-209ENST00000474157 C11orf95C9JLR9 678 aaPredicted RBP9.98□□□□□ -0.81
GPNMB-209ENST00000474157 ZPR1O75312 459 aa9.98□□□□□ -0.81
GPNMB-209ENST00000474157 AAMPQ13685 434 aa9.98□□□□□ -0.81
GPNMB-209ENST00000474157 FAM160A2Q8N612 972 aaPredicted RBP9.98□□□□□ -0.81
GPNMB-209ENST00000474157 PRDM9Q9NQV7 894 aa9.98□□□□□ -0.81
GPNMB-209ENST00000474157 TSPOAP1O95153 1857 aa9.98□□□□□ -0.81
GPNMB-209ENST00000474157 PTPRNQ16849 979 aa9.97□□□□□ -0.81
GPNMB-209ENST00000474157 PLSCR2Q9NRY7 297 aa9.97□□□□□ -0.81
GPNMB-209ENST00000474157 ADAMTS12P58397 1594 aa9.97□□□□□ -0.81
GPNMB-209ENST00000474157 ADCY10Q96PN6 1610 aa9.96□□□□□ -0.81
GPNMB-209ENST00000474157 ADH1BP00325 375 aa9.96□□□□□ -0.82
GPNMB-209ENST00000474157 CCDC136Q96JN2 1154 aa9.96□□□□□ -0.82
GPNMB-209ENST00000474157 MAP10Q9P2G4 905 aa9.96□□□□□ -0.82
GPNMB-209ENST00000474157 CDK11AQ9UQ88 783 aaPredicted RBP9.96□□□□□ -0.82
GPNMB-209ENST00000474157 TOP2BQ02880 1626 aa9.96□□□□□ -0.82
GPNMB-209ENST00000474157 DXOO77932 396 aaKnown RBP9.95□□□□□ -0.82
GPNMB-209ENST00000474157 F12P00748 615 aaPredicted RBP9.95□□□□□ -0.82
GPNMB-209ENST00000474157 TJAP1Q5JTD0 557 aa9.95□□□□□ -0.82
GPNMB-209ENST00000474157 ZNF516Q92618 1163 aa9.95□□□□□ -0.82
GPNMB-209ENST00000474157 CCDC97Q96F63 343 aaPredicted RBP9.95□□□□□ -0.82
GPNMB-209ENST00000474157 IL21Q9HBE4 155 aa9.95□□□□□ -0.82
GPNMB-209ENST00000474157 PLB1Q6P1J6 1458 aa9.95□□□□□ -0.82
GPNMB-209ENST00000474157 WRNQ14191 1432 aaPredicted RBP eCLIP9.94□□□□□ -0.82
GPNMB-209ENST00000474157 VAC14Q08AM6 782 aa9.94□□□□□ -0.82
GPNMB-209ENST00000474157 WASHC4Q2M389 1173 aa9.94□□□□□ -0.82
GPNMB-209ENST00000474157 ASXL2Q76L83 1435 aa9.93□□□□□ -0.82
GPNMB-209ENST00000474157 CCNYL3P0C7X3 344 aa9.93□□□□□ -0.82
GPNMB-209ENST00000474157 CTHP32929 405 aa9.93□□□□□ -0.82
GPNMB-209ENST00000474157 MMP16P51512 607 aa9.93□□□□□ -0.82
GPNMB-209ENST00000474157 PNMA1Q8ND90 353 aa9.93□□□□□ -0.82
GPNMB-209ENST00000474157 GLMNQ92990 594 aa9.93□□□□□ -0.82
GPNMB-209ENST00000474157 CALR3Q96L12 384 aaKnown RBP9.93□□□□□ -0.82
GPNMB-209ENST00000474157 NUDT12Q9BQG2 462 aa9.93□□□□□ -0.82
GPNMB-209ENST00000474157 PTPRGP23470 1445 aa9.92□□□□□ -0.82
GPNMB-209ENST00000474157 BRD2P25440 801 aaKnown RBP9.92□□□□□ -0.82
GPNMB-209ENST00000474157 SERPINA10Q9UK55 444 aa9.92□□□□□ -0.82
GPNMB-209ENST00000474157 TEX14Q8IWB6 1497 aa9.91□□□□□ -0.82
GPNMB-209ENST00000474157 GLI2P10070 1586 aa9.91□□□□□ -0.82
GPNMB-209ENST00000474157 SLC6A16Q9GZN6 736 aa9.9□□□□□ -0.82
GPNMB-209ENST00000474157 EVA1BQ9NVM1 165 aa9.9□□□□□ -0.82
GPNMB-209ENST00000474157 FKBPLQ9UIM3 349 aa9.9□□□□□ -0.82
GPNMB-209ENST00000474157 KCNH2Q12809 1159 aa9.89□□□□□ -0.83
GPNMB-209ENST00000474157 ADAMTS19Q8TE59 1207 aa9.89□□□□□ -0.83
GPNMB-209ENST00000474157 ERICH3Q5RHP9 1530 aa9.88□□□□□ -0.83
GPNMB-209ENST00000474157 ABCC2Q92887 1545 aa9.88□□□□□ -0.83
GPNMB-209ENST00000474157 HDGFL1Q5TGJ6 251 aa9.88□□□□□ -0.83
GPNMB-209ENST00000474157 NKX2-3Q8TAU0 364 aa9.88□□□□□ -0.83
GPNMB-209ENST00000474157 RNF166Q96A37 237 aaPredicted RBP9.88□□□□□ -0.83
GPNMB-209ENST00000474157 RBM10P98175 930 aaKnown RBP9.87□□□□□ -0.83
GPNMB-209ENST00000474157 CCDC24Q8N4L8 307 aa9.87□□□□□ -0.83
GPNMB-209ENST00000474157 ZC3H4Q9UPT8 1303 aaKnown RBP9.86□□□□□ -0.83
GPNMB-209ENST00000474157 S1PR4O95977 384 aa9.86□□□□□ -0.83
GPNMB-209ENST00000474157 FBXO45P0C2W1 286 aa9.86□□□□□ -0.83
GPNMB-209ENST00000474157 USP35Q9P2H5 1018 aa9.86□□□□□ -0.83
GPNMB-209ENST00000474157 PTPRMP28827 1452 aa9.85□□□□□ -0.83
GPNMB-209ENST00000474157 NR1H3Q13133 447 aa9.85□□□□□ -0.83
GPNMB-209ENST00000474157 HCSTQ9UBK5 93 aa9.85□□□□□ -0.83
GPNMB-209ENST00000474157 KIAA0586Q9BVV6 1533 aa9.85□□□□□ -0.83
GPNMB-209ENST00000474157 PPRC1Q5VV67 1664 aaKnown RBP9.84□□□□□ -0.83
GPNMB-209ENST00000474157 EPRSP07814 1512 aaKnown RBP9.84□□□□□ -0.83
GPNMB-209ENST00000474157 ZBBXA8MT70 800 aa9.84□□□□□ -0.83
GPNMB-209ENST00000474157 RRP9O43818 475 aaKnown RBP9.84□□□□□ -0.83
GPNMB-209ENST00000474157 SPNS2Q8IVW8 549 aa9.84□□□□□ -0.83
GPNMB-209ENST00000474157 ARMC2Q8NEN0 867 aa9.84□□□□□ -0.83
GPNMB-209ENST00000474157 ALG2Q9H553 416 aa9.84□□□□□ -0.83
GPNMB-209ENST00000474157 TNIKQ9UKE5 1360 aa9.84□□□□□ -0.83
GPNMB-209ENST00000474157 RUSC2Q8N2Y8 1516 aa9.83□□□□□ -0.84
GPNMB-209ENST00000474157 SOX11P35716 441 aa9.83□□□□□ -0.84
GPNMB-209ENST00000474157 HSPA2P54652 639 aa9.83□□□□□ -0.84
GPNMB-209ENST00000474157 PTCRAQ6ISU1 281 aaPredicted RBP9.83□□□□□ -0.84
GPNMB-209ENST00000474157 UNC93B1Q9H1C4 597 aa9.83□□□□□ -0.84
GPNMB-209ENST00000474157 PCDH10Q9P2E7 1040 aa9.83□□□□□ -0.84
GPNMB-209ENST00000474157 NCLP19338 710 aaKnown RBP9.82□□□□□ -0.84
GPNMB-209ENST00000474157 EIF4G2P78344 907 aaKnown RBP eCLIP9.82□□□□□ -0.84
GPNMB-209ENST00000474157 SEMA3FQ13275 785 aa9.82□□□□□ -0.84
GPNMB-209ENST00000474157 NBPF14Q5TI25 921 aa9.82□□□□□ -0.84
GPNMB-209ENST00000474157 NPM2Q86SE8 214 aaKnown RBP9.82□□□□□ -0.84
GPNMB-209ENST00000474157 BCCIPQ9P287 314 aaKnown RBP eCLIP9.82□□□□□ -0.84
GPNMB-209ENST00000474157 FCF1Q9Y324 198 aaKnown RBP9.82□□□□□ -0.84
GPNMB-209ENST00000474157 KCNC4Q03721 635 aa9.81□□□□□ -0.84
GPNMB-209ENST00000474157 GPKOWQ92917 476 aaPredicted RBP eCLIP9.81□□□□□ -0.84
GPNMB-209ENST00000474157 CARMIL2Q6F5E8 1435 aa9.81□□□□□ -0.84
GPNMB-209ENST00000474157 PCF11O94913 1555 aaKnown RBP9.8□□□□□ -0.84
GPNMB-209ENST00000474157 ITGBL1O95965 494 aaPredicted RBP9.8□□□□□ -0.84
GPNMB-209ENST00000474157 PDXDC2PQ6P474 469 aa9.8□□□□□ -0.84
GPNMB-209ENST00000474157 UHRF1BP1LA0JNW5 1464 aa9.79□□□□□ -0.84
GPNMB-209ENST00000474157 PTK2Q05397 1052 aa9.79□□□□□ -0.84
GPNMB-209ENST00000474157 UACAQ9BZF9 1416 aa9.79□□□□□ -0.84
GPNMB-209ENST00000474157 SPATA31D1Q6ZQQ2 1576 aa9.79□□□□□ -0.84
GPNMB-209ENST00000474157 UCN2Q96RP3 112 aa9.78□□□□□ -0.84
GPNMB-209ENST00000474157 GPSM3Q9Y4H4 160 aa9.78□□□□□ -0.84
GPNMB-209ENST00000474157 ARID4BQ4LE39 1312 aaPredicted RBP9.78□□□□□ -0.84
GPNMB-209ENST00000474157 CD109Q6YHK3 1445 aa9.77□□□□□ -0.85
GPNMB-209ENST00000474157 PPEF1O14829 653 aaPredicted RBP9.77□□□□□ -0.85
GPNMB-209ENST00000474157 HSP90B1P14625 803 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms