RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 KRT28Q7Z3Y7 464 aa10.38□□□□□ -0.75
CCDC93-207ENST00000474006 DDX17Q92841 729 aaKnown RBP10.38□□□□□ -0.75
CCDC93-207ENST00000474006 ANKRD36BQ8N2N9 1353 aa10.38□□□□□ -0.75
CCDC93-207ENST00000474006 CLCN6P51797 869 aa10.37□□□□□ -0.75
CCDC93-207ENST00000474006 XPCQ01831 940 aaPredicted RBP10.37□□□□□ -0.75
CCDC93-207ENST00000474006 CPSF1Q10570 1443 aaKnown RBP10.37□□□□□ -0.75
CCDC93-207ENST00000474006 MKRN3Q13064 507 aaKnown RBP10.37□□□□□ -0.75
CCDC93-207ENST00000474006 CNGB1Q14028 1251 aaPredicted RBP10.37□□□□□ -0.75
CCDC93-207ENST00000474006 CDC42BPGQ6DT37 1551 aa10.37□□□□□ -0.75
CCDC93-207ENST00000474006 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.37□□□□□ -0.75
CCDC93-207ENST00000474006 A0A1W2PP64 1363 aa10.37□□□□□ -0.75
CCDC93-207ENST00000474006 POLR3AO14802 1390 aaPredicted RBP10.37□□□□□ -0.75
CCDC93-207ENST00000474006 KTN1Q86UP2 1357 aaKnown RBP10.37□□□□□ -0.75
CCDC93-207ENST00000474006 CD163L1Q9NR16 1453 aa10.36□□□□□ -0.75
CCDC93-207ENST00000474006 TTC21BQ7Z4L5 1316 aa10.35□□□□□ -0.75
CCDC93-207ENST00000474006 TTLL13PA6NNM8 815 aa10.35□□□□□ -0.75
CCDC93-207ENST00000474006 FYB1O15117 783 aa10.35□□□□□ -0.75
CCDC93-207ENST00000474006 ILDR1Q86SU0 546 aaPredicted RBP10.35□□□□□ -0.75
CCDC93-207ENST00000474006 NALCNQ8IZF0 1738 aa10.35□□□□□ -0.75
CCDC93-207ENST00000474006 NPHP3Q7Z494 1330 aa10.34□□□□□ -0.75
CCDC93-207ENST00000474006 CC2D1BQ5T0F9 858 aaKnown RBP10.34□□□□□ -0.75
CCDC93-207ENST00000474006 ARHGEF1Q92888 912 aaKnown RBP10.34□□□□□ -0.75
CCDC93-207ENST00000474006 CGNL1Q0VF96 1302 aa10.33□□□□□ -0.76
CCDC93-207ENST00000474006 NME9Q86XW9 330 aa10.33□□□□□ -0.76
CCDC93-207ENST00000474006 ABTB2Q8N961 1025 aa10.33□□□□□ -0.76
CCDC93-207ENST00000474006 GGNBP2Q9H3C7 697 aa10.33□□□□□ -0.76
CCDC93-207ENST00000474006 NSD3Q9BZ95 1437 aa10.33□□□□□ -0.76
CCDC93-207ENST00000474006 IQSEC2Q5JU85 1478 aa10.32□□□□□ -0.76
CCDC93-207ENST00000474006 E2F4Q16254 413 aa10.32□□□□□ -0.76
CCDC93-207ENST00000474006 NUTM2GQ5VZR2 741 aa10.32□□□□□ -0.76
CCDC93-207ENST00000474006 LMOD2Q6P5Q4 547 aa10.32□□□□□ -0.76
CCDC93-207ENST00000474006 BMP2KQ9NSY1 1161 aaPredicted RBP10.32□□□□□ -0.76
CCDC93-207ENST00000474006 USP32Q8NFA0 1604 aa10.32□□□□□ -0.76
CCDC93-207ENST00000474006 USP6P35125 1406 aa10.32□□□□□ -0.76
CCDC93-207ENST00000474006 SSH2Q76I76 1423 aa10.32□□□□□ -0.76
CCDC93-207ENST00000474006 SOS2Q07890 1332 aaPredicted RBP10.32□□□□□ -0.76
CCDC93-207ENST00000474006 TTC21AQ8NDW8 1320 aa10.32□□□□□ -0.76
CCDC93-207ENST00000474006 XIRP1Q702N8 1843 aaKnown RBP10.31□□□□□ -0.76
CCDC93-207ENST00000474006 BRD4O60885 1362 aaPredicted RBP10.31□□□□□ -0.76
CCDC93-207ENST00000474006 FMN2Q9NZ56 1722 aa10.31□□□□□ -0.76
CCDC93-207ENST00000474006 ANP32CO43423 234 aa10.31□□□□□ -0.76
CCDC93-207ENST00000474006 PDE4AP27815 886 aa10.31□□□□□ -0.76
CCDC93-207ENST00000474006 MFSD10Q14728 455 aa10.31□□□□□ -0.76
CCDC93-207ENST00000474006 MORC1Q86VD1 984 aa10.31□□□□□ -0.76
CCDC93-207ENST00000474006 CRISPLD2Q9H0B8 497 aa10.31□□□□□ -0.76
CCDC93-207ENST00000474006 EDC4Q6P2E9 1401 aaKnown RBP10.31□□□□□ -0.76
CCDC93-207ENST00000474006 RALBP1Q15311 655 aa10.3□□□□□ -0.76
CCDC93-207ENST00000474006 LRRC59Q96AG4 307 aaKnown RBP10.3□□□□□ -0.76
CCDC93-207ENST00000474006 COG3Q96JB2 828 aa10.3□□□□□ -0.76
CCDC93-207ENST00000474006 PRKRIP1Q9H875 184 aaPredicted RBP10.3□□□□□ -0.76
CCDC93-207ENST00000474006 SPATA31A3Q5VYP0 1347 aa10.3□□□□□ -0.76
CCDC93-207ENST00000474006 NPC1L1Q9UHC9 1359 aa10.29□□□□□ -0.76
CCDC93-207ENST00000474006 GALR2O43603 387 aaPredicted RBP10.29□□□□□ -0.76
CCDC93-207ENST00000474006 TNNT2P45379 298 aaPredicted RBP10.29□□□□□ -0.76
CCDC93-207ENST00000474006 NLRP13Q86W25 1043 aa10.29□□□□□ -0.76
CCDC93-207ENST00000474006 SBNO1A3KN83 1393 aa10.28□□□□□ -0.76
CCDC93-207ENST00000474006 FBLN1P23142 703 aa10.28□□□□□ -0.76
CCDC93-207ENST00000474006 HAX1O00165 279 aa10.27□□□□□ -0.77
CCDC93-207ENST00000474006 LARP6Q9BRS8 491 aaKnown RBP10.27□□□□□ -0.77
CCDC93-207ENST00000474006 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.27□□□□□ -0.775e-7■■■□□ 16.2
CCDC93-207ENST00000474006 TRIM35Q9UPQ4 493 aa10.27□□□□□ -0.77
CCDC93-207ENST00000474006 USP31Q70CQ4 1352 aa10.26□□□□□ -0.77
CCDC93-207ENST00000474006 CABLES1Q8TDN4 633 aa10.26□□□□□ -0.77
CCDC93-207ENST00000474006 NSD2O96028 1365 aa10.26□□□□□ -0.77
CCDC93-207ENST00000474006 MYOM1P52179 1685 aa10.25□□□□□ -0.77
CCDC93-207ENST00000474006 PXDNQ92626 1479 aa10.25□□□□□ -0.77
CCDC93-207ENST00000474006 GCP02774 474 aa10.25□□□□□ -0.77
CCDC93-207ENST00000474006 PPP2R1AP30153 589 aa10.25□□□□□ -0.77
CCDC93-207ENST00000474006 HSPA1LP34931 641 aa10.25□□□□□ -0.77
CCDC93-207ENST00000474006 TOPAZ1Q8N9V7 1692 aa10.25□□□□□ -0.77
CCDC93-207ENST00000474006 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.24□□□□□ -0.77
CCDC93-207ENST00000474006 KCNH5Q8NCM2 988 aa10.24□□□□□ -0.77
CCDC93-207ENST00000474006 DDX27Q96GQ7 796 aaKnown RBP10.24□□□□□ -0.77
CCDC93-207ENST00000474006 ARIH1Q9Y4X5 557 aaPredicted RBP10.24□□□□□ -0.77
CCDC93-207ENST00000474006 ARHGEF10O15013 1369 aa10.24□□□□□ -0.77
CCDC93-207ENST00000474006 PARD3Q8TEW0 1356 aa10.24□□□□□ -0.77
CCDC93-207ENST00000474006 RGPD8O14715 1765 aaPredicted RBP10.24□□□□□ -0.77
CCDC93-207ENST00000474006 MTHFSP49914 203 aa10.23□□□□□ -0.77
CCDC93-207ENST00000474006 RRS1Q15050 365 aaKnown RBP10.23□□□□□ -0.77
CCDC93-207ENST00000474006 POLKQ9UBT6 870 aa10.23□□□□□ -0.77
CCDC93-207ENST00000474006 TNS3Q68CZ2 1445 aa10.23□□□□□ -0.77
CCDC93-207ENST00000474006 PPM1GO15355 546 aaPredicted RBP10.22□□□□□ -0.77
CCDC93-207ENST00000474006 ZC3H6P61129 1189 aaKnown RBP10.22□□□□□ -0.77
CCDC93-207ENST00000474006 EVX2Q03828 476 aa10.22□□□□□ -0.77
CCDC93-207ENST00000474006 CAMK2BQ13554 666 aa10.22□□□□□ -0.77
CCDC93-207ENST00000474006 FBXO41Q8TF61 875 aa10.22□□□□□ -0.77
CCDC93-207ENST00000474006 USP19O94966 1318 aa10.22□□□□□ -0.77
CCDC93-207ENST00000474006 MYBBP1AQ9BQG0 1328 aaKnown RBP10.22□□□□□ -0.77
CCDC93-207ENST00000474006 KIF1AQ12756 1690 aa10.22□□□□□ -0.77
CCDC93-207ENST00000474006 ITSN1Q15811 1721 aa10.21□□□□□ -0.77
CCDC93-207ENST00000474006 TULP1O00294 542 aaPredicted RBP10.21□□□□□ -0.77
CCDC93-207ENST00000474006 CCDC184Q52MB2 194 aa10.21□□□□□ -0.77
CCDC93-207ENST00000474006 ARHGEF25Q86VW2 580 aa10.21□□□□□ -0.77
CCDC93-207ENST00000474006 EMILIN1Q9Y6C2 1016 aa10.21□□□□□ -0.77
CCDC93-207ENST00000474006 OVOS2A0A0J9YW53 1432 aa10.21□□□□□ -0.78
CCDC93-207ENST00000474006 OVOS2Q6IE36 1432 aa10.21□□□□□ -0.78
CCDC93-207ENST00000474006 ROBO1Q9Y6N7 1651 aa10.21□□□□□ -0.78
CCDC93-207ENST00000474006 ZBTB7CA1YPR0 619 aa10.2□□□□□ -0.78
CCDC93-207ENST00000474006 AMPHP49418 695 aa10.2□□□□□ -0.78
CCDC93-207ENST00000474006 AATKQ6ZMQ8 1374 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms