RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 CABLES1Q8TDN4 633 aa19.57■□□□□ 0.72
LMNA-213ENST00000473598 LRP6O75581 1613 aa19.56■□□□□ 0.72
LMNA-213ENST00000473598 DIAPH1O60610 1272 aaKnown RBP19.56■□□□□ 0.72
LMNA-213ENST00000473598 NUDCQ9Y266 331 aa19.55■□□□□ 0.72
LMNA-213ENST00000473598 LTN1O94822 1766 aa19.55■□□□□ 0.72
LMNA-213ENST00000473598 SOX12O15370 315 aa19.54■□□□□ 0.72
LMNA-213ENST00000473598 COL22A1Q8NFW1 1626 aaPredicted RBP19.54■□□□□ 0.72
LMNA-213ENST00000473598 ARHGEF10O15013 1369 aa19.54■□□□□ 0.72
LMNA-213ENST00000473598 SLIT3O75094 1523 aa19.53■□□□□ 0.72
LMNA-213ENST00000473598 SPATA31A6Q5VVP1 1343 aa19.53■□□□□ 0.72
LMNA-213ENST00000473598 NFAT5O94916 1531 aa19.52■□□□□ 0.72
LMNA-213ENST00000473598 MAP3K19Q56UN5 1328 aa19.52■□□□□ 0.72
LMNA-213ENST00000473598 MED1Q15648 1581 aaPredicted RBP19.51■□□□□ 0.71
LMNA-213ENST00000473598 SENP3-EIF4A1A0A087X0R7 540 aa19.51■□□□□ 0.71
LMNA-213ENST00000473598 U2AF1L5P0DN76 240 aaPredicted RBP19.51■□□□□ 0.71
LMNA-213ENST00000473598 U2AF1Q01081 240 aaKnown RBP eCLIP19.51■□□□□ 0.71
LMNA-213ENST00000473598 FKBP8Q14318 412 aa19.51■□□□□ 0.71
LMNA-213ENST00000473598 KCNH5Q8NCM2 988 aa19.51■□□□□ 0.71
LMNA-213ENST00000473598 KIF24Q5T7B8 1368 aa19.5■□□□□ 0.71
LMNA-213ENST00000473598 U2SURPO15042 1029 aaKnown RBP19.5■□□□□ 0.71
LMNA-213ENST00000473598 ADAMTS2O95450 1211 aa19.5■□□□□ 0.71
LMNA-213ENST00000473598 CCDC146Q8IYE0 955 aa19.5■□□□□ 0.71
LMNA-213ENST00000473598 USP19O94966 1318 aa19.5■□□□□ 0.71
LMNA-213ENST00000473598 ABCA3Q99758 1704 aa19.49■□□□□ 0.71
LMNA-213ENST00000473598 IL13P35225 146 aa19.49■□□□□ 0.71
LMNA-213ENST00000473598 FLT4P35916 1363 aa19.49■□□□□ 0.71
LMNA-213ENST00000473598 CRYBG1Q9Y4K1 1723 aa19.49■□□□□ 0.71
LMNA-213ENST00000473598 PHRF1Q9P1Y6 1649 aaKnown RBP19.48■□□□□ 0.71
LMNA-213ENST00000473598 AMPHP49418 695 aa19.47■□□□□ 0.71
LMNA-213ENST00000473598 HAP1P54257 671 aaPredicted RBP19.47■□□□□ 0.71
LMNA-213ENST00000473598 HSP90AB2PQ58FF8 381 aa19.47■□□□□ 0.71
LMNA-213ENST00000473598 RUNDC1Q96C34 613 aa19.47■□□□□ 0.71
LMNA-213ENST00000473598 GCP02774 474 aa19.46■□□□□ 0.71
LMNA-213ENST00000473598 NEFLP07196 543 aa19.46■□□□□ 0.71
LMNA-213ENST00000473598 RGPD1P0DJD0 1748 aa19.46■□□□□ 0.71
LMNA-213ENST00000473598 RTL1A6NKG5 1358 aa19.45■□□□□ 0.7
LMNA-213ENST00000473598 APAF1O14727 1248 aa19.45■□□□□ 0.7
LMNA-213ENST00000473598 EIF4A2Q14240 407 aaKnown RBP19.45■□□□□ 0.7
LMNA-213ENST00000473598 MEX3CQ5U5Q3 659 aaKnown RBP19.45■□□□□ 0.7
LMNA-213ENST00000473598 SALL2Q9Y467 1007 aaPredicted RBP19.45■□□□□ 0.7
LMNA-213ENST00000473598 HOXC9P31274 260 aa19.44■□□□□ 0.7
LMNA-213ENST00000473598 C8orf37Q96NL8 207 aa19.44■□□□□ 0.7
LMNA-213ENST00000473598 FCHSD2O94868 740 aa19.43■□□□□ 0.7
LMNA-213ENST00000473598 PLEKHF1Q96S99 279 aa19.43■□□□□ 0.7
LMNA-213ENST00000473598 PNNQ9H307 717 aaKnown RBP19.42■□□□□ 0.7
LMNA-213ENST00000473598 ZC3H6P61129 1189 aaKnown RBP19.42■□□□□ 0.7
LMNA-213ENST00000473598 NGEFQ8N5V2 710 aa19.42■□□□□ 0.7
LMNA-213ENST00000473598 ARHGEF25Q86VW2 580 aa19.41■□□□□ 0.7
LMNA-213ENST00000473598 RSPH6AQ9H0K4 717 aa19.41■□□□□ 0.7
LMNA-213ENST00000473598 IP6K1Q92551 441 aa19.41■□□□□ 0.7
LMNA-213ENST00000473598 TCP11L2Q8N4U5 519 aa19.4■□□□□ 0.7
LMNA-213ENST00000473598 HMOX1P09601 288 aa19.39■□□□□ 0.69
LMNA-213ENST00000473598 KIAA0232Q92628 1395 aa19.39■□□□□ 0.69
LMNA-213ENST00000473598 PDE3BQ13370 1112 aa19.39■□□□□ 0.69
LMNA-213ENST00000473598 RGPD5Q99666 1765 aa19.38■□□□□ 0.69
LMNA-213ENST00000473598 ZNF521Q96K83 1311 aa19.38■□□□□ 0.69
LMNA-213ENST00000473598 FAM83GA6ND36 823 aa19.38■□□□□ 0.69
LMNA-213ENST00000473598 CHRNA2Q15822 529 aa19.38■□□□□ 0.69
LMNA-213ENST00000473598 NGLY1Q96IV0 654 aa19.38■□□□□ 0.69
LMNA-213ENST00000473598 MAPK8IP3Q9UPT6 1336 aa19.38■□□□□ 0.69
LMNA-213ENST00000473598 PRKAR2BP31323 418 aa19.37■□□□□ 0.69
LMNA-213ENST00000473598 ZBTB7CA1YPR0 619 aa19.37■□□□□ 0.69
LMNA-213ENST00000473598 NCBP3Q53F19 620 aaKnown RBP19.37■□□□□ 0.69
LMNA-213ENST00000473598 RGS17Q9UGC6 210 aaPredicted RBP19.37■□□□□ 0.69
LMNA-213ENST00000473598 PRDM11Q9NQV5 511 aa19.36■□□□□ 0.69
LMNA-213ENST00000473598 AFF2P51816 1311 aa19.36■□□□□ 0.69
LMNA-213ENST00000473598 COL18A1P39060 1754 aa19.36■□□□□ 0.69
LMNA-213ENST00000473598 PHF23Q9BUL5 403 aaPredicted RBP19.35■□□□□ 0.69
LMNA-213ENST00000473598 SULT6B1Q6IMI4 303 aa19.35■□□□□ 0.69
LMNA-213ENST00000473598 RRP7AQ9Y3A4 280 aaKnown RBP19.35■□□□□ 0.69
LMNA-213ENST00000473598 RGPD2P0DJD1 1756 aa19.35■□□□□ 0.69
LMNA-213ENST00000473598 IGSF1Q8N6C5 1336 aa19.35■□□□□ 0.69
LMNA-213ENST00000473598 NEFMP07197 916 aa19.34■□□□□ 0.69
LMNA-213ENST00000473598 NEUROD2Q15784 382 aa19.34■□□□□ 0.69
LMNA-213ENST00000473598 EYA1Q99502 592 aa19.34■□□□□ 0.69
LMNA-213ENST00000473598 ABCC6O95255 1503 aa19.34■□□□□ 0.69
LMNA-213ENST00000473598 TMPOP42166 694 aaKnown RBP19.33■□□□□ 0.68
LMNA-213ENST00000473598 CCDC27Q2M243 656 aa19.33■□□□□ 0.68
LMNA-213ENST00000473598 AEBP1Q8IUX7 1158 aa19.33■□□□□ 0.68
LMNA-213ENST00000473598 DLG5Q8TDM6 1919 aa19.33■□□□□ 0.68
LMNA-213ENST00000473598 PLCH1Q4KWH8 1693 aa19.33■□□□□ 0.68
LMNA-213ENST00000473598 CPDO75976 1380 aa19.33■□□□□ 0.68
LMNA-213ENST00000473598 KDRP35968 1356 aa19.33■□□□□ 0.68
LMNA-213ENST00000473598 WWC1Q8IX03 1113 aa19.32■□□□□ 0.68
LMNA-213ENST00000473598 LTV1Q96GA3 475 aaPredicted RBP19.32■□□□□ 0.68
LMNA-213ENST00000473598 SLIT2O94813 1529 aa19.32■□□□□ 0.68
LMNA-213ENST00000473598 FNBP4Q8N3X1 1017 aaPredicted RBP19.32■□□□□ 0.68
LMNA-213ENST00000473598 CDCA7LQ96GN5 454 aa19.32■□□□□ 0.68
LMNA-213ENST00000473598 PHACTR3Q96KR7 559 aa19.32■□□□□ 0.68
LMNA-213ENST00000473598 GOLGA2Q08379 1002 aa19.31■□□□□ 0.68
LMNA-213ENST00000473598 BTG4Q9NY30 223 aa19.31■□□□□ 0.68
LMNA-213ENST00000473598 BCL9LQ86UU0 1499 aa19.31■□□□□ 0.68
LMNA-213ENST00000473598 COL14A1Q05707 1796 aaKnown RBP19.31■□□□□ 0.68
LMNA-213ENST00000473598 USP21Q9UK80 565 aa19.3■□□□□ 0.68
LMNA-213ENST00000473598 AXIN2Q9Y2T1 843 aa19.3■□□□□ 0.68
LMNA-213ENST00000473598 CAMTA1Q9Y6Y1 1673 aa19.29■□□□□ 0.68
LMNA-213ENST00000473598 POTEAQ6S8J7 498 aa19.29■□□□□ 0.68
LMNA-213ENST00000473598 LMO7Q8WWI1 1683 aa19.28■□□□□ 0.68
LMNA-213ENST00000473598 RIPK4P57078 832 aa19.28■□□□□ 0.68
LMNA-213ENST00000473598 NFE2L2Q16236 605 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms