RNA–Protein interactions for RNA: ENST00000473007.7

UBE2D4-210, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-210ENST00000473007 TIE1P35590 1138 aa5.8□□□□□ -1.48
UBE2D4-210ENST00000473007 TSNAXIP1Q2TAA8 658 aa5.8□□□□□ -1.48
UBE2D4-210ENST00000473007 TYW1BQ6NUM6 668 aa5.8□□□□□ -1.48
UBE2D4-210ENST00000473007 NOL8Q76FK4 1167 aaKnown RBP5.8□□□□□ -1.48
UBE2D4-210ENST00000473007 NOP9Q86U38 636 aaKnown RBP5.8□□□□□ -1.48
UBE2D4-210ENST00000473007 PDCD7Q8N8D1 485 aaKnown RBP5.8□□□□□ -1.48
UBE2D4-210ENST00000473007 EPS8L1Q8TE68 723 aa5.8□□□□□ -1.48
UBE2D4-210ENST00000473007 LRRN4Q8WUT4 740 aa5.8□□□□□ -1.48
UBE2D4-210ENST00000473007 BOLA1Q9Y3E2 137 aa5.8□□□□□ -1.48
UBE2D4-210ENST00000473007 MIA2Q96PC5 1412 aa5.8□□□□□ -1.48
UBE2D4-210ENST00000473007 KDM5CP41229 1560 aa5.8□□□□□ -1.48
UBE2D4-210ENST00000473007 MARCH6O60337 910 aa5.79□□□□□ -1.48
UBE2D4-210ENST00000473007 CC2D2BQ6DHV5 1058 aa5.79□□□□□ -1.48
UBE2D4-210ENST00000473007 TMEM92Q6UXU6 159 aa5.79□□□□□ -1.48
UBE2D4-210ENST00000473007 SULF1Q8IWU6 871 aa5.79□□□□□ -1.48
UBE2D4-210ENST00000473007 UBE2Q2Q8WVN8 375 aa5.79□□□□□ -1.48
UBE2D4-210ENST00000473007 MS4A3Q96HJ5 214 aa5.79□□□□□ -1.48
UBE2D4-210ENST00000473007 RBM27Q9P2N5 1060 aaKnown RBP5.79□□□□□ -1.48
UBE2D4-210ENST00000473007 CD109Q6YHK3 1445 aa5.79□□□□□ -1.48
UBE2D4-210ENST00000473007 KIAA1107Q9UPP5 1409 aa5.79□□□□□ -1.48
UBE2D4-210ENST00000473007 REREQ9P2R6 1566 aa5.79□□□□□ -1.48
UBE2D4-210ENST00000473007 BCORL1Q5H9F3 1711 aa5.79□□□□□ -1.48
UBE2D4-210ENST00000473007 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.79□□□□□ -1.48
UBE2D4-210ENST00000473007 RCCD1A6NED2 376 aa5.78□□□□□ -1.48
UBE2D4-210ENST00000473007 FAM196BA6NMK8 535 aa5.78□□□□□ -1.48
UBE2D4-210ENST00000473007 ATP2B4P23634 1241 aa5.78□□□□□ -1.48
UBE2D4-210ENST00000473007 EIF4G2P78344 907 aaKnown RBP eCLIP5.78□□□□□ -1.48
UBE2D4-210ENST00000473007 ARHGEF5Q12774 1597 aa5.78□□□□□ -1.48
UBE2D4-210ENST00000473007 CHRDL2Q6WN34 429 aa5.78□□□□□ -1.48
UBE2D4-210ENST00000473007 FANCAO15360 1455 aa5.77□□□□□ -1.49
UBE2D4-210ENST00000473007 USP17L3A6NCW0 530 aa5.77□□□□□ -1.49
UBE2D4-210ENST00000473007 USP17L4A6NCW7 530 aa5.77□□□□□ -1.49
UBE2D4-210ENST00000473007 DDX11L8A8MPP1 907 aa5.77□□□□□ -1.49
UBE2D4-210ENST00000473007 PIK3CDO00329 1044 aa5.77□□□□□ -1.49
UBE2D4-210ENST00000473007 HDLBPQ00341 1268 aaKnown RBP5.77□□□□□ -1.49
UBE2D4-210ENST00000473007 CRTC2Q53ET0 693 aaPredicted RBP5.77□□□□□ -1.49
UBE2D4-210ENST00000473007 USP17L2Q6R6M4 530 aa5.77□□□□□ -1.49
UBE2D4-210ENST00000473007 USP17L1Q7RTZ2 530 aa5.77□□□□□ -1.49
UBE2D4-210ENST00000473007 PLEKHM2Q8IWE5 1019 aa5.77□□□□□ -1.49
UBE2D4-210ENST00000473007 NFATC2IPQ8NCF5 419 aa5.77□□□□□ -1.49
UBE2D4-210ENST00000473007 PIK3R5Q8WYR1 880 aa5.77□□□□□ -1.49
UBE2D4-210ENST00000473007 CDCA7Q9BWT1 371 aaPredicted RBP5.77□□□□□ -1.49
UBE2D4-210ENST00000473007 BACH2Q9BYV9 841 aa5.77□□□□□ -1.49
UBE2D4-210ENST00000473007 ABCC1P33527 1531 aa5.77□□□□□ -1.49
UBE2D4-210ENST00000473007 FAM135AQ9P2D6 1515 aa5.77□□□□□ -1.49
UBE2D4-210ENST00000473007 MTUS2Q5JR59 1369 aa5.77□□□□□ -1.49
UBE2D4-210ENST00000473007 ZNF518AQ6AHZ1 1483 aa5.77□□□□□ -1.49
UBE2D4-210ENST00000473007 MAST1Q9Y2H9 1570 aa5.76□□□□□ -1.49
UBE2D4-210ENST00000473007 CROCC2H7BZ55 1655 aa5.76□□□□□ -1.49
UBE2D4-210ENST00000473007 GPATCH8Q9UKJ3 1502 aaKnown RBP5.76□□□□□ -1.49
UBE2D4-210ENST00000473007 USP17L15C9J2P7 530 aa5.76□□□□□ -1.49
UBE2D4-210ENST00000473007 USP17L10C9JJH3 530 aa5.76□□□□□ -1.49
UBE2D4-210ENST00000473007 USP17L13C9JLJ4 530 aa5.76□□□□□ -1.49
UBE2D4-210ENST00000473007 USP17L12C9JPN9 530 aa5.76□□□□□ -1.49
UBE2D4-210ENST00000473007 USP17L11C9JVI0 530 aa5.76□□□□□ -1.49
UBE2D4-210ENST00000473007 USP17L21D6R901 530 aa5.76□□□□□ -1.49
UBE2D4-210ENST00000473007 USP17L18D6R9N7 530 aa5.76□□□□□ -1.49
UBE2D4-210ENST00000473007 USP17L22D6RA61 530 aa5.76□□□□□ -1.49
UBE2D4-210ENST00000473007 USP17L17D6RBQ6 530 aa5.76□□□□□ -1.49
UBE2D4-210ENST00000473007 USP17L19D6RCP7 530 aa5.76□□□□□ -1.49
UBE2D4-210ENST00000473007 USP17L20D6RJB6 530 aa5.76□□□□□ -1.49
UBE2D4-210ENST00000473007 LZTS3O60299 673 aaPredicted RBP5.76□□□□□ -1.49
UBE2D4-210ENST00000473007 SCNN1AP37088 669 aa5.76□□□□□ -1.49
UBE2D4-210ENST00000473007 FXR2P51116 673 aaKnown RBP eCLIP5.76□□□□□ -1.49
UBE2D4-210ENST00000473007 CLCN6P51797 869 aa5.76□□□□□ -1.49
UBE2D4-210ENST00000473007 USP17L24Q0WX57 530 aa5.76□□□□□ -1.49
UBE2D4-210ENST00000473007 C9orf131Q5VYM1 1079 aa5.76□□□□□ -1.49
UBE2D4-210ENST00000473007 PNMA1Q8ND90 353 aa5.76□□□□□ -1.49
UBE2D4-210ENST00000473007 HELBQ8NG08 1087 aaPredicted RBP5.76□□□□□ -1.49
UBE2D4-210ENST00000473007 C1orf216Q8TAB5 229 aa5.76□□□□□ -1.49
UBE2D4-210ENST00000473007 FAM200AQ8TCP9 573 aa5.76□□□□□ -1.49
UBE2D4-210ENST00000473007 ZNF592Q92610 1267 aa5.76□□□□□ -1.49
UBE2D4-210ENST00000473007 ASB16Q96NS5 453 aa5.76□□□□□ -1.49
UBE2D4-210ENST00000473007 PSMD1Q99460 953 aa5.76□□□□□ -1.49
UBE2D4-210ENST00000473007 LNPKQ9C0E8 428 aa5.76□□□□□ -1.49
UBE2D4-210ENST00000473007 CUEDC1Q9NWM3 386 aaPredicted RBP5.76□□□□□ -1.49
UBE2D4-210ENST00000473007 TRIM35Q9UPQ4 493 aa5.76□□□□□ -1.49
UBE2D4-210ENST00000473007 SBNO2Q9Y2G9 1366 aa5.76□□□□□ -1.49
UBE2D4-210ENST00000473007 NCOA2Q15596 1464 aa5.76□□□□□ -1.49
UBE2D4-210ENST00000473007 ADGBQ8N7X0 1667 aa5.75□□□□□ -1.49
UBE2D4-210ENST00000473007 MYOM3Q5VTT5 1437 aa5.75□□□□□ -1.49
UBE2D4-210ENST00000473007 TLDC2A0PJX2 215 aa5.75□□□□□ -1.49
UBE2D4-210ENST00000473007 G3V3G9 751 aa5.75□□□□□ -1.49
UBE2D4-210ENST00000473007 SCAMP3O14828 347 aaKnown RBP5.75□□□□□ -1.49
UBE2D4-210ENST00000473007 FDX1P10109 184 aa5.75□□□□□ -1.49
UBE2D4-210ENST00000473007 PTK7Q13308 1070 aa5.75□□□□□ -1.49
UBE2D4-210ENST00000473007 COL19A1Q14993 1142 aa5.75□□□□□ -1.49
UBE2D4-210ENST00000473007 C6orf132Q5T0Z8 1188 aa5.75□□□□□ -1.49
UBE2D4-210ENST00000473007 DNAJC2Q99543 621 aaKnown RBP5.75□□□□□ -1.49
UBE2D4-210ENST00000473007 TANGO6Q9C0B7 1094 aa5.75□□□□□ -1.49
UBE2D4-210ENST00000473007 BCL11AQ9H165 835 aa5.75□□□□□ -1.49
UBE2D4-210ENST00000473007 EGFL7Q9UHF1 273 aa5.75□□□□□ -1.49
UBE2D4-210ENST00000473007 BRPF3Q9ULD4 1205 aa5.75□□□□□ -1.49
UBE2D4-210ENST00000473007 PCDHGC3Q9UN70 934 aa5.75□□□□□ -1.49
UBE2D4-210ENST00000473007 TMA7Q9Y2S6 64 aaKnown RBP5.75□□□□□ -1.49
UBE2D4-210ENST00000473007 TCOF1Q13428 1488 aaKnown RBP5.75□□□□□ -1.49
UBE2D4-210ENST00000473007 MLH3Q9UHC1 1453 aa5.75□□□□□ -1.49
UBE2D4-210ENST00000473007 SHANK2Q9UPX8 1470 aa5.75□□□□□ -1.49
UBE2D4-210ENST00000473007 PLXNC1O60486 1568 aa5.75□□□□□ -1.49
UBE2D4-210ENST00000473007 FRMPD1Q5SYB0 1578 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms