RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 GJA5P36382 358 aa4.05□□□□□ -1.76
XRN1-210ENST00000472697 FAM26DQ5JW98 314 aa4.05□□□□□ -1.76
XRN1-210ENST00000472697 KIAA1468Q9P260 1216 aa4.05□□□□□ -1.76
XRN1-210ENST00000472697 PATL2C9JE40 543 aaKnown RBP4.04□□□□□ -1.76
XRN1-210ENST00000472697 MAPK1P28482 360 aa4.04□□□□□ -1.76
XRN1-210ENST00000472697 DPH6Q7L8W6 267 aa4.04□□□□□ -1.76
XRN1-210ENST00000472697 CERKQ8TCT0 537 aa4.04□□□□□ -1.76
XRN1-210ENST00000472697 GTF3C2Q8WUA4 911 aaPredicted RBP4.04□□□□□ -1.76
XRN1-210ENST00000472697 GPATCH3Q96I76 525 aa4.04□□□□□ -1.76
XRN1-210ENST00000472697 SPATA32Q96LK8 384 aa4.04□□□□□ -1.76
XRN1-210ENST00000472697 IQSEC3Q9UPP2 1182 aaPredicted RBP4.04□□□□□ -1.76
XRN1-210ENST00000472697 ZBTB7BO15156 539 aaPredicted RBP4.04□□□□□ -1.76
XRN1-210ENST00000472697 P4HBP07237 508 aaKnown RBP4.04□□□□□ -1.76
XRN1-210ENST00000472697 ELOAQ14241 798 aaKnown RBP4.04□□□□□ -1.76
XRN1-210ENST00000472697 VARS2Q5ST30 1063 aaKnown RBP4.04□□□□□ -1.76
XRN1-210ENST00000472697 ANKMY2Q8IV38 441 aa4.04□□□□□ -1.76
XRN1-210ENST00000472697 TSEN2Q8NCE0 465 aaKnown RBP4.04□□□□□ -1.76
XRN1-210ENST00000472697 FAM200AQ8TCP9 573 aa4.04□□□□□ -1.76
XRN1-210ENST00000472697 DRC1Q96MC2 740 aa4.04□□□□□ -1.76
XRN1-210ENST00000472697 KCNK17Q96T54 332 aa4.04□□□□□ -1.76
XRN1-210ENST00000472697 POLR3GLQ9BT43 218 aa4.04□□□□□ -1.76
XRN1-210ENST00000472697 CFHP08603 1231 aa4.03□□□□□ -1.76
XRN1-210ENST00000472697 FKBP5Q13451 457 aaPredicted RBP4.03□□□□□ -1.76
XRN1-210ENST00000472697 PLPP7Q8NBV4 271 aa4.03□□□□□ -1.76
XRN1-210ENST00000472697 CLP1Q92989 425 aaKnown RBP4.03□□□□□ -1.76
XRN1-210ENST00000472697 CCDC85AQ96PX6 553 aaPredicted RBP4.03□□□□□ -1.76
XRN1-210ENST00000472697 PIF1Q9H611 641 aa4.03□□□□□ -1.76
XRN1-210ENST00000472697 PRDM9Q9NQV7 894 aa4.03□□□□□ -1.76
XRN1-210ENST00000472697 CEP126Q9P2H0 1117 aa4.03□□□□□ -1.76
XRN1-210ENST00000472697 PCDHGB7Q9Y5F8 929 aa4.03□□□□□ -1.76
XRN1-210ENST00000472697 NR1H3Q13133 447 aa4.03□□□□□ -1.76
XRN1-210ENST00000472697 SAMD7Q7Z3H4 446 aa4.03□□□□□ -1.76
XRN1-210ENST00000472697 NT5DC4Q86YG4 428 aa4.03□□□□□ -1.76
XRN1-210ENST00000472697 PHTF2Q8N3S3 785 aa4.03□□□□□ -1.76
XRN1-210ENST00000472697 BRPF3Q9ULD4 1205 aa4.03□□□□□ -1.76
XRN1-210ENST00000472697 ZBBXA8MT70 800 aa4.02□□□□□ -1.77
XRN1-210ENST00000472697 ERCC5P28715 1186 aaPredicted RBP4.02□□□□□ -1.77
XRN1-210ENST00000472697 EIF4G2P78344 907 aaKnown RBP eCLIP4.02□□□□□ -1.77
XRN1-210ENST00000472697 PDE4CQ08493 712 aa4.02□□□□□ -1.77
XRN1-210ENST00000472697 TRAF7Q6Q0C0 670 aa4.02□□□□□ -1.77
XRN1-210ENST00000472697 METTL16Q86W50 562 aaKnown RBP4.02□□□□□ -1.77
XRN1-210ENST00000472697 SAP130Q9H0E3 1048 aa4.02□□□□□ -1.77
XRN1-210ENST00000472697 ACBD3Q9H3P7 528 aa4.02□□□□□ -1.77
XRN1-210ENST00000472697 BCL2L12Q9HB09 334 aa4.02□□□□□ -1.77
XRN1-210ENST00000472697 NLGN1Q8N2Q7 840 aa4.02□□□□□ -1.77
XRN1-210ENST00000472697 VTI1AQ96AJ9 217 aa4.02□□□□□ -1.77
XRN1-210ENST00000472697 ZC3H6P61129 1189 aaKnown RBP4.01□□□□□ -1.77
XRN1-210ENST00000472697 GLYCTKQ8IVS8 523 aa4.01□□□□□ -1.77
XRN1-210ENST00000472697 TPCN2Q8NHX9 752 aa4.01□□□□□ -1.77
XRN1-210ENST00000472697 LNPKQ9C0E8 428 aa4.01□□□□□ -1.77
XRN1-210ENST00000472697 FKBPLQ9UIM3 349 aa4.01□□□□□ -1.77
XRN1-210ENST00000472697 CADPSQ9ULU8 1353 aa4.01□□□□□ -1.77
XRN1-210ENST00000472697 OXLD1Q5BKU9 147 aa4.01□□□□□ -1.77
XRN1-210ENST00000472697 PIK3R5Q8WYR1 880 aa4.01□□□□□ -1.77
XRN1-210ENST00000472697 CARD14Q9BXL6 1004 aa4.01□□□□□ -1.77
XRN1-210ENST00000472697 NBPF26B4DH59 902 aa4□□□□□ -1.77
XRN1-210ENST00000472697 ICMTO60725 284 aa4□□□□□ -1.77
XRN1-210ENST00000472697 F12P00748 615 aaPredicted RBP4□□□□□ -1.77
XRN1-210ENST00000472697 MRPL58Q14197 206 aaKnown RBP4□□□□□ -1.77
XRN1-210ENST00000472697 TMC7Q7Z402 723 aa4□□□□□ -1.77
XRN1-210ENST00000472697 ATCAYQ86WG3 371 aa4□□□□□ -1.77
XRN1-210ENST00000472697 RNF135Q8IUD6 432 aa4□□□□□ -1.77
XRN1-210ENST00000472697 CCDC87Q9NVE4 849 aa4□□□□□ -1.77
XRN1-210ENST00000472697 ZNF394Q53GI3 561 aa4□□□□□ -1.77
XRN1-210ENST00000472697 WDR3Q9UNX4 943 aaKnown RBP eCLIP4□□□□□ -1.77
XRN1-210ENST00000472697 PCDHB9Q9Y5E1 797 aa4□□□□□ -1.77
XRN1-210ENST00000472697 ZBTB39O15060 712 aa3.99□□□□□ -1.77
XRN1-210ENST00000472697 SCTRP47872 440 aa3.99□□□□□ -1.77
XRN1-210ENST00000472697 TBCELQ5QJ74 424 aa3.99□□□□□ -1.77
XRN1-210ENST00000472697 CXXC1Q9P0U4 656 aaPredicted RBP3.99□□□□□ -1.77
XRN1-210ENST00000472697 MORN1Q5T089 497 aa3.99□□□□□ -1.77
XRN1-210ENST00000472697 DMRTA1Q5VZB9 504 aa3.99□□□□□ -1.77
XRN1-210ENST00000472697 LYPD8Q6UX82 237 aa3.99□□□□□ -1.77
XRN1-210ENST00000472697 ADAM32Q8TC27 787 aa3.99□□□□□ -1.77
XRN1-210ENST00000472697 TINF2Q9BSI4 451 aa3.99□□□□□ -1.77
XRN1-210ENST00000472697 NACADO15069 1562 aa3.99□□□□□ -1.77
XRN1-210ENST00000472697 ANKRD62A6NC57 917 aa3.98□□□□□ -1.77
XRN1-210ENST00000472697 IGHA2P01877 340 aa3.98□□□□□ -1.77
XRN1-210ENST00000472697 GTF2F1P35269 517 aaKnown RBP eCLIP3.98□□□□□ -1.77
XRN1-210ENST00000472697 PBX2P40425 430 aa3.98□□□□□ -1.77
XRN1-210ENST00000472697 RAB15P59190 212 aa3.98□□□□□ -1.77
XRN1-210ENST00000472697 CCDC102BQ68D86 513 aa3.98□□□□□ -1.77
XRN1-210ENST00000472697 LARP1Q6PKG0 1096 aaKnown RBP3.98□□□□□ -1.77
XRN1-210ENST00000472697 TAS1R3Q7RTX0 852 aa3.98□□□□□ -1.77
XRN1-210ENST00000472697 PLEKHM2Q8IWE5 1019 aa3.98□□□□□ -1.77
XRN1-210ENST00000472697 HINFPQ9BQA5 517 aa3.98□□□□□ -1.77
XRN1-210ENST00000472697 ZBED2Q9BTP6 218 aa3.98□□□□□ -1.77
XRN1-210ENST00000472697 TANGO6Q9C0B7 1094 aa3.98□□□□□ -1.77
XRN1-210ENST00000472697 MAGEB6P1A0A0J9YX57 407 aa3.98□□□□□ -1.77
XRN1-210ENST00000472697 PTPREP23469 700 aa3.98□□□□□ -1.77
XRN1-210ENST00000472697 MPSTP25325 297 aa3.98□□□□□ -1.77
XRN1-210ENST00000472697 DNAJA1P31689 397 aaKnown RBP3.98□□□□□ -1.77
XRN1-210ENST00000472697 CTHP32929 405 aa3.98□□□□□ -1.77
XRN1-210ENST00000472697 SOX11P35716 441 aa3.98□□□□□ -1.77
XRN1-210ENST00000472697 MAPK8P45983 427 aa3.98□□□□□ -1.77
XRN1-210ENST00000472697 PTCRAQ6ISU1 281 aaPredicted RBP3.98□□□□□ -1.77
XRN1-210ENST00000472697 RETREG3Q86VR2 466 aa3.98□□□□□ -1.77
XRN1-210ENST00000472697 ASB16Q96NS5 453 aa3.98□□□□□ -1.77
XRN1-210ENST00000472697 SBNO2Q9Y2G9 1366 aa3.98□□□□□ -1.77
XRN1-210ENST00000472697 F6X3S4 739 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms