RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 PRPF38BQ5VTL8 546 aaKnown RBP5.92□□□□□ -1.46
XRN1-209ENST00000472625 PTCRAQ6ISU1 281 aaPredicted RBP5.92□□□□□ -1.46
XRN1-209ENST00000472625 DDRGK1Q96HY6 314 aa5.92□□□□□ -1.46
XRN1-209ENST00000472625 MRGPRX2Q96LB1 330 aa5.92□□□□□ -1.46
XRN1-209ENST00000472625 NUDT12Q9BQG2 462 aa5.92□□□□□ -1.46
XRN1-209ENST00000472625 AAASQ9NRG9 546 aa5.92□□□□□ -1.46
XRN1-209ENST00000472625 TTBK1Q5TCY1 1321 aaPredicted RBP5.92□□□□□ -1.46
XRN1-209ENST00000472625 PHLDB1Q86UU1 1377 aa5.92□□□□□ -1.46
XRN1-209ENST00000472625 MAGI3Q5TCQ9 1506 aa5.91□□□□□ -1.46
XRN1-209ENST00000472625 J3QL48 77 aa5.91□□□□□ -1.46
XRN1-209ENST00000472625 PER1O15534 1290 aaPredicted RBP5.91□□□□□ -1.46
XRN1-209ENST00000472625 SKIV2LQ15477 1246 aaKnown RBP5.91□□□□□ -1.46
XRN1-209ENST00000472625 DIXDC1Q155Q3 683 aa5.91□□□□□ -1.46
XRN1-209ENST00000472625 DESI1Q6ICB0 168 aa5.91□□□□□ -1.46
XRN1-209ENST00000472625 PRR7Q8TB68 274 aa5.91□□□□□ -1.46
XRN1-209ENST00000472625 POLR3EQ9NVU0 708 aa5.91□□□□□ -1.46
XRN1-209ENST00000472625 ZCCHC11Q5TAX3 1644 aaKnown RBP5.91□□□□□ -1.46
XRN1-209ENST00000472625 TSPOAP1O95153 1857 aa5.9□□□□□ -1.46
XRN1-209ENST00000472625 WNT7AO00755 349 aa5.9□□□□□ -1.46
XRN1-209ENST00000472625 F12P00748 615 aaPredicted RBP5.9□□□□□ -1.46
XRN1-209ENST00000472625 CSPP1Q1MSJ5 1256 aa5.9□□□□□ -1.46
XRN1-209ENST00000472625 PPP2R2DQ66LE6 453 aa5.9□□□□□ -1.46
XRN1-209ENST00000472625 IL27Q8NEV9 243 aa5.9□□□□□ -1.46
XRN1-209ENST00000472625 ZNF775Q96BV0 537 aaPredicted RBP5.9□□□□□ -1.46
XRN1-209ENST00000472625 GOPCQ9HD26 462 aa5.9□□□□□ -1.46
XRN1-209ENST00000472625 CFAP43Q8NDM7 1665 aa5.9□□□□□ -1.47
XRN1-209ENST00000472625 CD109Q6YHK3 1445 aa5.9□□□□□ -1.47
XRN1-209ENST00000472625 PPRC1Q5VV67 1664 aaKnown RBP5.89□□□□□ -1.47
XRN1-209ENST00000472625 CTTNBP2Q8WZ74 1663 aa5.89□□□□□ -1.47
XRN1-209ENST00000472625 SMPD1P17405 629 aa5.89□□□□□ -1.47
XRN1-209ENST00000472625 LINC01559Q495D7 138 aa5.89□□□□□ -1.47
XRN1-209ENST00000472625 RC3H1Q5TC82 1133 aaKnown RBP5.89□□□□□ -1.47
XRN1-209ENST00000472625 ZBTB3Q9H5J0 574 aa5.89□□□□□ -1.47
XRN1-209ENST00000472625 PRXQ9BXM0 1461 aa5.89□□□□□ -1.47
XRN1-209ENST00000472625 LYPD8Q6UX82 237 aa5.88□□□□□ -1.47
XRN1-209ENST00000472625 EEA1Q15075 1411 aa5.88□□□□□ -1.47
XRN1-209ENST00000472625 ABCA8O94911 1581 aa5.88□□□□□ -1.47
XRN1-209ENST00000472625 SPDYE5A6NIY4 337 aa5.87□□□□□ -1.47
XRN1-209ENST00000472625 AXIN1O15169 862 aa5.87□□□□□ -1.47
XRN1-209ENST00000472625 CCNYL3P0C7X3 344 aa5.87□□□□□ -1.47
XRN1-209ENST00000472625 PTPRNQ16849 979 aa5.87□□□□□ -1.47
XRN1-209ENST00000472625 SNIP1Q8TAD8 396 aaKnown RBP5.87□□□□□ -1.47
XRN1-209ENST00000472625 HPS1Q92902 700 aa5.87□□□□□ -1.47
XRN1-209ENST00000472625 RSPH6AQ9H0K4 717 aa5.87□□□□□ -1.47
XRN1-209ENST00000472625 GMPR2Q9P2T1 348 aaKnown RBP5.87□□□□□ -1.47
XRN1-209ENST00000472625 ARAP3Q8WWN8 1544 aa5.86□□□□□ -1.47
XRN1-209ENST00000472625 NEO1Q92859 1461 aa5.86□□□□□ -1.47
XRN1-209ENST00000472625 AVPP01185 164 aa5.86□□□□□ -1.47
XRN1-209ENST00000472625 UNC93B1Q9H1C4 597 aa5.86□□□□□ -1.47
XRN1-209ENST00000472625 EVA1BQ9NVM1 165 aa5.86□□□□□ -1.47
XRN1-209ENST00000472625 COL17A1Q9UMD9 1497 aaPredicted RBP5.85□□□□□ -1.47
XRN1-209ENST00000472625 ALDH1A1P00352 501 aa5.85□□□□□ -1.47
XRN1-209ENST00000472625 WNT7BP56706 349 aa5.85□□□□□ -1.47
XRN1-209ENST00000472625 SH3BP2P78314 561 aa5.85□□□□□ -1.47
XRN1-209ENST00000472625 CTDSPL2Q05D32 466 aa5.85□□□□□ -1.47
XRN1-209ENST00000472625 EHBP1Q8NDI1 1231 aa5.85□□□□□ -1.47
XRN1-209ENST00000472625 BAP1Q92560 729 aa5.85□□□□□ -1.47
XRN1-209ENST00000472625 TSC1Q92574 1164 aa5.85□□□□□ -1.47
XRN1-209ENST00000472625 MAP10Q9P2G4 905 aa5.85□□□□□ -1.47
XRN1-209ENST00000472625 TLL2Q9Y6L7 1015 aa5.85□□□□□ -1.47
XRN1-209ENST00000472625 HECW2Q9P2P5 1572 aa5.84□□□□□ -1.47
XRN1-209ENST00000472625 CTHP32929 405 aa5.84□□□□□ -1.47
XRN1-209ENST00000472625 KCNH2Q12809 1159 aa5.84□□□□□ -1.47
XRN1-209ENST00000472625 CRIPAKQ8N1N5 446 aa5.84□□□□□ -1.47
XRN1-209ENST00000472625 HMX1Q9NP08 348 aaPredicted RBP5.84□□□□□ -1.47
XRN1-209ENST00000472625 GPR37L1O60883 481 aa5.83□□□□□ -1.48
XRN1-209ENST00000472625 RFC5P40937 340 aa5.83□□□□□ -1.48
XRN1-209ENST00000472625 LRRN4Q8WUT4 740 aa5.83□□□□□ -1.48
XRN1-209ENST00000472625 ABCA9Q8IUA7 1624 aa5.83□□□□□ -1.48
XRN1-209ENST00000472625 SAMD9Q5K651 1589 aa5.83□□□□□ -1.48
XRN1-209ENST00000472625 CFAP74Q9C0B2 1584 aa5.83□□□□□ -1.48
XRN1-209ENST00000472625 EFCAB5A4FU69 1503 aa5.83□□□□□ -1.48
XRN1-209ENST00000472625 EPS8L1Q8TE68 723 aa5.82□□□□□ -1.48
XRN1-209ENST00000472625 POGZQ7Z3K3 1410 aa5.82□□□□□ -1.48
XRN1-209ENST00000472625 RAPGEF6Q8TEU7 1601 aa5.81□□□□□ -1.48
XRN1-209ENST00000472625 C11orf95C9JLR9 678 aaPredicted RBP5.81□□□□□ -1.48
XRN1-209ENST00000472625 SIAH2O43255 324 aa5.81□□□□□ -1.48
XRN1-209ENST00000472625 BMP1P13497 986 aa5.81□□□□□ -1.48
XRN1-209ENST00000472625 SNRPBP14678 240 aaKnown RBP5.81□□□□□ -1.48
XRN1-209ENST00000472625 SMCPP49901 116 aaPredicted RBP5.81□□□□□ -1.48
XRN1-209ENST00000472625 CTC1Q2NKJ3 1217 aa5.81□□□□□ -1.48
XRN1-209ENST00000472625 C4orf48Q5BLP8 95 aa5.81□□□□□ -1.48
XRN1-209ENST00000472625 ZNF511Q8NB15 262 aa5.81□□□□□ -1.48
XRN1-209ENST00000472625 GJD4Q96KN9 370 aaPredicted RBP5.81□□□□□ -1.48
XRN1-209ENST00000472625 OCSTAMPQ9BR26 566 aa5.81□□□□□ -1.48
XRN1-209ENST00000472625 ATP13A2Q9NQ11 1180 aa5.81□□□□□ -1.48
XRN1-209ENST00000472625 ATP10BO94823 1461 aa5.81□□□□□ -1.48
XRN1-209ENST00000472625 ARHGEF40Q8TER5 1519 aa5.8□□□□□ -1.48
XRN1-209ENST00000472625 FANCAO15360 1455 aa5.8□□□□□ -1.48
XRN1-209ENST00000472625 MAGI2Q86UL8 1455 aa5.8□□□□□ -1.48
XRN1-209ENST00000472625 NUTM2BA6NNL0 878 aaPredicted RBP5.8□□□□□ -1.48
XRN1-209ENST00000472625 NUTM2EB1AL46 878 aaPredicted RBP5.8□□□□□ -1.48
XRN1-209ENST00000472625 NUTM2DQ5VT03 806 aaPredicted RBP5.8□□□□□ -1.48
XRN1-209ENST00000472625 NUTM2AQ8IVF1 878 aaPredicted RBP5.8□□□□□ -1.48
XRN1-209ENST00000472625 FOXJ1Q92949 421 aa5.8□□□□□ -1.48
XRN1-209ENST00000472625 TRIM34Q9BYJ4 488 aa5.8□□□□□ -1.48
XRN1-209ENST00000472625 AKNAQ7Z591 1439 aa5.8□□□□□ -1.48
XRN1-209ENST00000472625 DENND4BO75064 1496 aaPredicted RBP5.79□□□□□ -1.48
XRN1-209ENST00000472625 PTPRMP28827 1452 aa5.79□□□□□ -1.48
XRN1-209ENST00000472625 KIF21BO75037 1637 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms